RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 BRWD3Q6RI45 1802 aa18.61■□□□□ 0.57
DDR1-253ENST00000504651 TNS2Q63HR2 1409 aa18.61■□□□□ 0.57
DDR1-253ENST00000504651 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
DDR1-253ENST00000504651 CDCA7Q9BWT1 371 aaPredicted RBP18.61■□□□□ 0.57
DDR1-253ENST00000504651 PLEKHG2Q9H7P9 1386 aa18.58■□□□□ 0.57
DDR1-253ENST00000504651 RSPH6AQ9H0K4 717 aa18.58■□□□□ 0.56
DDR1-253ENST00000504651 PRKAR2BP31323 418 aa18.57■□□□□ 0.56
DDR1-253ENST00000504651 SEPT12Q8IYM1 358 aa18.57■□□□□ 0.56
DDR1-253ENST00000504651 ONECUT3O60422 494 aaPredicted RBP18.56■□□□□ 0.56
DDR1-253ENST00000504651 DDB1Q16531 1140 aa18.56■□□□□ 0.56
DDR1-253ENST00000504651 PNISRQ8TF01 805 aaKnown RBP18.56■□□□□ 0.56
DDR1-253ENST00000504651 FCHSD2O94868 740 aa18.55■□□□□ 0.56
DDR1-253ENST00000504651 NEFMP07197 916 aa18.55■□□□□ 0.56
DDR1-253ENST00000504651 ADAMTS8Q9UP79 889 aa18.55■□□□□ 0.56
DDR1-253ENST00000504651 PNNQ9H307 717 aaKnown RBP18.54■□□□□ 0.56
DDR1-253ENST00000504651 MAPK8IP3Q9UPT6 1336 aa18.53■□□□□ 0.56
DDR1-253ENST00000504651 EXOC5O00471 708 aa18.53■□□□□ 0.56
DDR1-253ENST00000504651 PLEKHO1Q53GL0 409 aaPredicted RBP18.53■□□□□ 0.56
DDR1-253ENST00000504651 FAM9BQ8IZU0 186 aa18.53■□□□□ 0.56
DDR1-253ENST00000504651 ZCRB1Q8TBF4 217 aaKnown RBP18.53■□□□□ 0.56
DDR1-253ENST00000504651 SPG7Q9UQ90 795 aa18.53■□□□□ 0.56
DDR1-253ENST00000504651 PCDH11XQ9BZA7 1347 aa18.52■□□□□ 0.56
DDR1-253ENST00000504651 PCDH11YQ9BZA8 1340 aa18.52■□□□□ 0.56
DDR1-253ENST00000504651 VIRMAQ69YN4 1812 aaKnown RBP18.52■□□□□ 0.56
DDR1-253ENST00000504651 AMOTQ4VCS5 1084 aa18.52■□□□□ 0.56
DDR1-253ENST00000504651 DLG5Q8TDM6 1919 aa18.51■□□□□ 0.55
DDR1-253ENST00000504651 PDE3BQ13370 1112 aa18.51■□□□□ 0.55
DDR1-253ENST00000504651 CCDC146Q8IYE0 955 aa18.51■□□□□ 0.55
DDR1-253ENST00000504651 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.51■□□□□ 0.55
DDR1-253ENST00000504651 DOT1LQ8TEK3 1739 aa18.51■□□□□ 0.55
DDR1-253ENST00000504651 ZNF530Q6P9A1 599 aaPredicted RBP18.5■□□□□ 0.55
DDR1-253ENST00000504651 PLEKHF1Q96S99 279 aa18.5■□□□□ 0.55
DDR1-253ENST00000504651 KRT27Q7Z3Y8 459 aa18.49■□□□□ 0.55
DDR1-253ENST00000504651 DDX54Q8TDD1 881 aaKnown RBP18.49■□□□□ 0.55
DDR1-253ENST00000504651 RUNDC1Q96C34 613 aa18.49■□□□□ 0.55
DDR1-253ENST00000504651 MTHFSDQ2M296 383 aaKnown RBP18.48■□□□□ 0.55
DDR1-253ENST00000504651 C1orf141Q5JVX7 400 aa18.48■□□□□ 0.55
DDR1-253ENST00000504651 GAS2L2Q8NHY3 880 aa18.48■□□□□ 0.55
DDR1-253ENST00000504651 PHACTR3Q96KR7 559 aa18.48■□□□□ 0.55
DDR1-253ENST00000504651 TOGARAM1Q9Y4F4 1720 aa18.48■□□□□ 0.55
DDR1-253ENST00000504651 SCN11AQ9UI33 1791 aa18.47■□□□□ 0.55
DDR1-253ENST00000504651 CYP27B1O15528 508 aa18.46■□□□□ 0.55
DDR1-253ENST00000504651 PHKG2P15735 406 aa18.46■□□□□ 0.55
DDR1-253ENST00000504651 IFNL2Q8IZJ0 200 aa18.46■□□□□ 0.55
DDR1-253ENST00000504651 MARCH10Q8NA82 808 aaPredicted RBP18.46■□□□□ 0.55
DDR1-253ENST00000504651 MAP3K5Q99683 1374 aa18.45■□□□□ 0.54
DDR1-253ENST00000504651 ADAMTS7Q9UKP4 1686 aa18.45■□□□□ 0.54
DDR1-253ENST00000504651 SBF2Q86WG5 1849 aa18.45■□□□□ 0.54
DDR1-253ENST00000504651 NHSQ6T4R5 1651 aa18.44■□□□□ 0.54
DDR1-253ENST00000504651 AKAP4Q5JQC9 854 aa18.44■□□□□ 0.54
DDR1-253ENST00000504651 FAM182BQ5T319 152 aa18.44■□□□□ 0.54
DDR1-253ENST00000504651 NFE2L2Q16236 605 aa18.43■□□□□ 0.54
DDR1-253ENST00000504651 ITGB4P16144 1822 aa18.42■□□□□ 0.54
DDR1-253ENST00000504651 KDM6AO15550 1401 aaPredicted RBP18.42■□□□□ 0.54
DDR1-253ENST00000504651 HSP90AB1P08238 724 aaKnown RBP18.42■□□□□ 0.54
DDR1-253ENST00000504651 BCL9O00512 1426 aa18.41■□□□□ 0.54
DDR1-253ENST00000504651 GNAT3A8MTJ3 354 aa18.41■□□□□ 0.54
DDR1-253ENST00000504651 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
DDR1-253ENST00000504651 RRP7AQ9Y3A4 280 aaKnown RBP18.41■□□□□ 0.54
DDR1-253ENST00000504651 APAF1O14727 1248 aa18.4■□□□□ 0.54
DDR1-253ENST00000504651 MRC1P22897 1456 aa18.39■□□□□ 0.54
DDR1-253ENST00000504651 NKX1-1Q15270 411 aaPredicted RBP18.39■□□□□ 0.53
DDR1-253ENST00000504651 NEUROD2Q15784 382 aa18.39■□□□□ 0.53
DDR1-253ENST00000504651 MPRIPQ6WCQ1 1025 aa18.39■□□□□ 0.53
DDR1-253ENST00000504651 FAM196AQ6ZSG2 479 aa18.39■□□□□ 0.53
DDR1-253ENST00000504651 RTF1Q92541 710 aaKnown RBP18.39■□□□□ 0.53
DDR1-253ENST00000504651 DCAF5Q96JK2 942 aa18.39■□□□□ 0.53
DDR1-253ENST00000504651 TNS1Q9HBL0 1735 aaKnown RBP18.38■□□□□ 0.53
DDR1-253ENST00000504651 SIPA1L3O60292 1781 aaPredicted RBP18.38■□□□□ 0.53
DDR1-253ENST00000504651 RIPK4P57078 832 aa18.38■□□□□ 0.53
DDR1-253ENST00000504651 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
DDR1-253ENST00000504651 BTAF1O14981 1849 aa18.37■□□□□ 0.53
DDR1-253ENST00000504651 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
DDR1-253ENST00000504651 ACSBG1Q96GR2 724 aa18.37■□□□□ 0.53
DDR1-253ENST00000504651 RNMTO43148 476 aaKnown RBP18.36■□□□□ 0.53
DDR1-253ENST00000504651 HTATSF1O43719 755 aaKnown RBP18.35■□□□□ 0.53
DDR1-253ENST00000504651 ILDR2Q71H61 639 aa18.35■□□□□ 0.53
DDR1-253ENST00000504651 SYTL4Q96C24 671 aaPredicted RBP18.35■□□□□ 0.53
DDR1-253ENST00000504651 KAT6BQ8WYB5 2073 aa18.35■□□□□ 0.53
DDR1-253ENST00000504651 PAPPAQ13219 1627 aa18.34■□□□□ 0.53
DDR1-253ENST00000504651 CEMIPQ8WUJ3 1361 aa18.34■□□□□ 0.53
DDR1-253ENST00000504651 DCTN1Q14203 1278 aa18.34■□□□□ 0.53
DDR1-253ENST00000504651 MCM10Q7L590 875 aa18.34■□□□□ 0.53
DDR1-253ENST00000504651 LGR6Q9HBX8 967 aa18.34■□□□□ 0.53
DDR1-253ENST00000504651 ERVV-2B6SEH9 535 aa18.32■□□□□ 0.52
DDR1-253ENST00000504651 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
DDR1-253ENST00000504651 CABP4P57796 275 aa18.32■□□□□ 0.52
DDR1-253ENST00000504651 TEFQ10587 303 aa18.32■□□□□ 0.52
DDR1-253ENST00000504651 IL17REQ8NFR9 667 aa18.32■□□□□ 0.52
DDR1-253ENST00000504651 TMOD3Q9NYL9 352 aa18.32■□□□□ 0.52
DDR1-253ENST00000504651 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
DDR1-253ENST00000504651 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
DDR1-253ENST00000504651 TRIM37O94972 964 aa18.31■□□□□ 0.52
DDR1-253ENST00000504651 THUMPD2Q9BTF0 503 aaKnown RBP18.31■□□□□ 0.52
DDR1-253ENST00000504651 KDM3BQ7LBC6 1761 aa18.3■□□□□ 0.52
DDR1-253ENST00000504651 KCNQ2O43526 872 aa18.3■□□□□ 0.52
DDR1-253ENST00000504651 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
DDR1-253ENST00000504651 HNRNPUQ00839 825 aaKnown RBP eCLIP18.29■□□□□ 0.52
DDR1-253ENST00000504651 CCDC27Q2M243 656 aa18.29■□□□□ 0.52
DDR1-253ENST00000504651 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms