RNA–Protein interactions for RNA: ENST00000504311.5

MATR3-209, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-209ENST00000504311 PCDHB11Q9Y5F2 797 aa8.42□□□□□ -1.06
MATR3-209ENST00000504311 USP17L3A6NCW0 530 aa8.41□□□□□ -1.06
MATR3-209ENST00000504311 USP17L4A6NCW7 530 aa8.41□□□□□ -1.06
MATR3-209ENST00000504311 LZTS3O60299 673 aaPredicted RBP8.41□□□□□ -1.06
MATR3-209ENST00000504311 NCOA4Q13772 614 aa8.41□□□□□ -1.06
MATR3-209ENST00000504311 OXLD1Q5BKU9 147 aa8.41□□□□□ -1.06
MATR3-209ENST00000504311 INTS6LQ5JSJ4 861 aaKnown RBP8.41□□□□□ -1.06
MATR3-209ENST00000504311 USP17L2Q6R6M4 530 aa8.41□□□□□ -1.06
MATR3-209ENST00000504311 USP17L1Q7RTZ2 530 aa8.41□□□□□ -1.06
MATR3-209ENST00000504311 CCDC125Q86Z20 511 aa8.41□□□□□ -1.06
MATR3-209ENST00000504311 PBXIP1Q96AQ6 731 aa8.41□□□□□ -1.06
MATR3-209ENST00000504311 FSHRP23945 695 aa8.4□□□□□ -1.06
MATR3-209ENST00000504311 EML3Q32P44 896 aa8.4□□□□□ -1.06
MATR3-209ENST00000504311 TRIM46Q7Z4K8 759 aa8.4□□□□□ -1.06
MATR3-209ENST00000504311 PLEKHM2Q8IWE5 1019 aa8.4□□□□□ -1.06
MATR3-209ENST00000504311 CDCA7Q9BWT1 371 aaPredicted RBP8.4□□□□□ -1.06
MATR3-209ENST00000504311 ESF1Q9H501 851 aaKnown RBP8.4□□□□□ -1.06
MATR3-209ENST00000504311 MKRN1Q9UHC7 482 aaKnown RBP8.4□□□□□ -1.06
MATR3-209ENST00000504311 CHIC2Q9UKJ5 165 aa8.4□□□□□ -1.06
MATR3-209ENST00000504311 WASF2Q9Y6W5 498 aa8.4□□□□□ -1.06
MATR3-209ENST00000504311 ERVH48-1M5A8F1 160 aa8.39□□□□□ -1.07
MATR3-209ENST00000504311 ADH1CP00326 375 aa8.39□□□□□ -1.07
MATR3-209ENST00000504311 USP4Q13107 963 aa8.39□□□□□ -1.07
MATR3-209ENST00000504311 NR5A1Q13285 461 aa8.39□□□□□ -1.07
MATR3-209ENST00000504311 BMP1P13497 986 aa8.38□□□□□ -1.07
MATR3-209ENST00000504311 DHX9Q08211 1270 aaKnown RBP8.38□□□□□ -1.07
MATR3-209ENST00000504311 KANK4Q5T7N3 995 aaPredicted RBP8.38□□□□□ -1.07
MATR3-209ENST00000504311 SIRT1Q96EB6 747 aa8.38□□□□□ -1.07
MATR3-209ENST00000504311 NOD1Q9Y239 953 aa8.38□□□□□ -1.07
MATR3-209ENST00000504311 ERBB4Q15303 1308 aa8.37□□□□□ -1.07
MATR3-209ENST00000504311 CAPN5O15484 640 aaPredicted RBP8.37□□□□□ -1.07
MATR3-209ENST00000504311 SRPK2P78362 688 aaKnown RBP8.37□□□□□ -1.07
MATR3-209ENST00000504311 SUZ12Q15022 739 aaKnown RBP8.37□□□□□ -1.07
MATR3-209ENST00000504311 CCDC116Q8IYX3 515 aa8.37□□□□□ -1.07
MATR3-209ENST00000504311 TRIM52Q96A61 297 aa8.37□□□□□ -1.07
MATR3-209ENST00000504311 TMPRSS4Q9NRS4 437 aa8.37□□□□□ -1.07
MATR3-209ENST00000504311 MYCP01106 439 aaPredicted RBP8.36□□□□□ -1.07
MATR3-209ENST00000504311 RASA1P20936 1047 aa8.36□□□□□ -1.07
MATR3-209ENST00000504311 VEGFBP49765 207 aa8.36□□□□□ -1.07
MATR3-209ENST00000504311 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
MATR3-209ENST00000504311 ATP5J2-PTCD1G3V325 749 aa8.35□□□□□ -1.07
MATR3-209ENST00000504311 NR3C2P08235 984 aa8.35□□□□□ -1.07
MATR3-209ENST00000504311 NNTQ13423 1086 aa8.35□□□□□ -1.07
MATR3-209ENST00000504311 PPP1R26Q5T8A7 1209 aaPredicted RBP8.35□□□□□ -1.07
MATR3-209ENST00000504311 TRIM50Q86XT4 487 aa8.35□□□□□ -1.07
MATR3-209ENST00000504311 CYLDQ9NQC7 956 aa8.34□□□□□ -1.07
MATR3-209ENST00000504311 PGPEP1Q9NXJ5 209 aa8.34□□□□□ -1.07
MATR3-209ENST00000504311 ATG7O95352 703 aa8.33□□□□□ -1.08
MATR3-209ENST00000504311 CSB-PGBD3P0DP91 1061 aa8.33□□□□□ -1.08
MATR3-209ENST00000504311 ATP1A2P50993 1020 aa8.33□□□□□ -1.08
MATR3-209ENST00000504311 CC2D2BQ6DHV5 1058 aa8.33□□□□□ -1.08
MATR3-209ENST00000504311 OGFOD1Q8N543 542 aa8.33□□□□□ -1.08
MATR3-209ENST00000504311 EMILIN1Q9Y6C2 1016 aa8.33□□□□□ -1.08
MATR3-209ENST00000504311 SCTRP47872 440 aa8.32□□□□□ -1.08
MATR3-209ENST00000504311 GTF2IP78347 998 aa8.32□□□□□ -1.08
MATR3-209ENST00000504311 PSME1Q06323 249 aa8.32□□□□□ -1.08
MATR3-209ENST00000504311 ZNF784Q8NCA9 323 aaPredicted RBP8.32□□□□□ -1.08
MATR3-209ENST00000504311 DNAAF2Q9NVR5 837 aaKnown RBP8.32□□□□□ -1.08
MATR3-209ENST00000504311 ERVK-9P63128 1117 aa8.31□□□□□ -1.08
MATR3-209ENST00000504311 KCNMA1Q12791 1236 aa8.31□□□□□ -1.08
MATR3-209ENST00000504311 RETREG2Q8NC44 543 aa8.31□□□□□ -1.08
MATR3-209ENST00000504311 RBM19Q9Y4C8 960 aaKnown RBP8.31□□□□□ -1.08
MATR3-209ENST00000504311 FAM196BA6NMK8 535 aa8.3□□□□□ -1.08
MATR3-209ENST00000504311 ZBTB7BO15156 539 aaPredicted RBP8.3□□□□□ -1.08
MATR3-209ENST00000504311 VSIG8P0DPA2 414 aa8.3□□□□□ -1.08
MATR3-209ENST00000504311 PDIA4P13667 645 aaKnown RBP8.3□□□□□ -1.08
MATR3-209ENST00000504311 CLDN10P78369 228 aa8.3□□□□□ -1.08
MATR3-209ENST00000504311 CRTC2Q53ET0 693 aaPredicted RBP8.3□□□□□ -1.08
MATR3-209ENST00000504311 LARGE2Q8N3Y3 721 aa8.3□□□□□ -1.08
MATR3-209ENST00000504311 ZNF594Q96JF6 807 aaPredicted RBP8.3□□□□□ -1.08
MATR3-209ENST00000504311 ZFP42Q96MM3 310 aa8.3□□□□□ -1.08
MATR3-209ENST00000504311 PCDHGA11Q9Y5H2 935 aa8.3□□□□□ -1.08
MATR3-209ENST00000504311 USP17L15C9J2P7 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 USP17L10C9JJH3 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 USP17L13C9JLJ4 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 USP17L12C9JPN9 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 USP17L11C9JVI0 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 USP17L21D6R901 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 USP17L18D6R9N7 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 USP17L22D6RA61 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 USP17L17D6RBQ6 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 USP17L19D6RCP7 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 USP17L20D6RJB6 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 LILRA1O75019 489 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 ZIC2O95409 532 aaPredicted RBP8.29□□□□□ -1.08
MATR3-209ENST00000504311 ADD1P35611 737 aaKnown RBP8.29□□□□□ -1.08
MATR3-209ENST00000504311 WDR4P57081 412 aaKnown RBP8.29□□□□□ -1.08
MATR3-209ENST00000504311 PDE4CQ08493 712 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 USP17L24Q0WX57 530 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 PTK7Q13308 1070 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
MATR3-209ENST00000504311 NOVA2Q9UNW9 492 aaKnown RBP8.29□□□□□ -1.08
MATR3-209ENST00000504311 CCDC102BQ68D86 513 aa8.28□□□□□ -1.08
MATR3-209ENST00000504311 ANKMY2Q8IV38 441 aa8.28□□□□□ -1.08
MATR3-209ENST00000504311 ITPKCQ96DU7 683 aa8.28□□□□□ -1.08
MATR3-209ENST00000504311 OSBPL3Q9H4L5 887 aa8.28□□□□□ -1.08
MATR3-209ENST00000504311 DPYDQ12882 1025 aa8.27□□□□□ -1.09
MATR3-209ENST00000504311 ELOAQ14241 798 aaKnown RBP8.27□□□□□ -1.09
MATR3-209ENST00000504311 TPCN2Q8NHX9 752 aa8.27□□□□□ -1.09
MATR3-209ENST00000504311 CBLBQ13191 982 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms