RNA–Protein interactions for RNA: ENST00000503670.5

DDR1-251, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-251ENST00000503670 U2AF1Q01081 240 aaKnown RBP eCLIP11.92□□□□□ -0.5
DDR1-251ENST00000503670 PDE3BQ13370 1112 aa11.92□□□□□ -0.5
DDR1-251ENST00000503670 KRT27Q7Z3Y8 459 aa11.92□□□□□ -0.5
DDR1-251ENST00000503670 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
DDR1-251ENST00000503670 TNS2Q63HR2 1409 aa11.92□□□□□ -0.5
DDR1-251ENST00000503670 SHANK3Q9BYB0 1731 aa11.91□□□□□ -0.5
DDR1-251ENST00000503670 ZCRB1Q8TBF4 217 aaKnown RBP11.91□□□□□ -0.5
DDR1-251ENST00000503670 FCHSD2O94868 740 aa11.9□□□□□ -0.5
DDR1-251ENST00000503670 WDR43Q15061 677 aaKnown RBP eCLIP11.9□□□□□ -0.5
DDR1-251ENST00000503670 ILDR2Q71H61 639 aa11.9□□□□□ -0.5
DDR1-251ENST00000503670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.9□□□□□ -0.5
DDR1-251ENST00000503670 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
DDR1-251ENST00000503670 AMOTQ4VCS5 1084 aa11.89□□□□□ -0.51
DDR1-251ENST00000503670 PLEKHO1Q53GL0 409 aaPredicted RBP11.89□□□□□ -0.51
DDR1-251ENST00000503670 PNNQ9H307 717 aaKnown RBP11.89□□□□□ -0.51
DDR1-251ENST00000503670 MRS2Q9HD23 443 aa11.89□□□□□ -0.51
DDR1-251ENST00000503670 PCDH11XQ9BZA7 1347 aa11.88□□□□□ -0.51
DDR1-251ENST00000503670 PCDH11YQ9BZA8 1340 aa11.88□□□□□ -0.51
DDR1-251ENST00000503670 CCDC184Q52MB2 194 aa11.88□□□□□ -0.51
DDR1-251ENST00000503670 MARCH10Q8NA82 808 aaPredicted RBP11.88□□□□□ -0.51
DDR1-251ENST00000503670 DDX54Q8TDD1 881 aaKnown RBP11.88□□□□□ -0.51
DDR1-251ENST00000503670 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
DDR1-251ENST00000503670 NEFMP07197 916 aa11.87□□□□□ -0.51
DDR1-251ENST00000503670 PRKAR2BP31323 418 aa11.87□□□□□ -0.51
DDR1-251ENST00000503670 FAM196AQ6ZSG2 479 aa11.87□□□□□ -0.51
DDR1-251ENST00000503670 SBF2Q86WG5 1849 aa11.86□□□□□ -0.51
DDR1-251ENST00000503670 EP400Q96L91 3159 aa11.86□□□□□ -0.51
DDR1-251ENST00000503670 FAM182BQ5T319 152 aa11.86□□□□□ -0.51
DDR1-251ENST00000503670 IFNL2Q8IZJ0 200 aa11.86□□□□□ -0.51
DDR1-251ENST00000503670 KAT6BQ8WYB5 2073 aa11.86□□□□□ -0.51
DDR1-251ENST00000503670 CCER2I3L3R5 266 aa11.85□□□□□ -0.51
DDR1-251ENST00000503670 CYP27B1O15528 508 aa11.85□□□□□ -0.51
DDR1-251ENST00000503670 C1orf141Q5JVX7 400 aa11.85□□□□□ -0.51
DDR1-251ENST00000503670 ZNF530Q6P9A1 599 aaPredicted RBP11.85□□□□□ -0.51
DDR1-251ENST00000503670 MIER1Q8N108 512 aa11.85□□□□□ -0.51
DDR1-251ENST00000503670 ADAMTS8Q9UP79 889 aa11.85□□□□□ -0.51
DDR1-251ENST00000503670 BCL9O00512 1426 aa11.85□□□□□ -0.51
DDR1-251ENST00000503670 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
DDR1-251ENST00000503670 PHKG2P15735 406 aa11.84□□□□□ -0.51
DDR1-251ENST00000503670 MTHFSDQ2M296 383 aaKnown RBP11.84□□□□□ -0.51
DDR1-251ENST00000503670 GAS2L2Q8NHY3 880 aa11.84□□□□□ -0.51
DDR1-251ENST00000503670 PNISRQ8TF01 805 aaKnown RBP11.84□□□□□ -0.51
DDR1-251ENST00000503670 PHACTR3Q96KR7 559 aa11.84□□□□□ -0.51
DDR1-251ENST00000503670 MAPK8IP3Q9UPT6 1336 aa11.84□□□□□ -0.51
DDR1-251ENST00000503670 DOT1LQ8TEK3 1739 aa11.83□□□□□ -0.52
DDR1-251ENST00000503670 HSP90AB1P08238 724 aaKnown RBP11.83□□□□□ -0.52
DDR1-251ENST00000503670 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
DDR1-251ENST00000503670 AKAP4Q5JQC9 854 aa11.83□□□□□ -0.52
DDR1-251ENST00000503670 PLEKHF1Q96S99 279 aa11.83□□□□□ -0.52
DDR1-251ENST00000503670 DLG5Q8TDM6 1919 aa11.82□□□□□ -0.52
DDR1-251ENST00000503670 NHSQ6T4R5 1651 aa11.82□□□□□ -0.52
DDR1-251ENST00000503670 RUNDC1Q96C34 613 aa11.82□□□□□ -0.52
DDR1-251ENST00000503670 SCN11AQ9UI33 1791 aa11.82□□□□□ -0.52
DDR1-251ENST00000503670 ITGB4P16144 1822 aa11.81□□□□□ -0.52
DDR1-251ENST00000503670 CCDC146Q8IYE0 955 aa11.81□□□□□ -0.52
DDR1-251ENST00000503670 DCAF5Q96JK2 942 aa11.81□□□□□ -0.52
DDR1-251ENST00000503670 MAP3K5Q99683 1374 aa11.8□□□□□ -0.52
DDR1-251ENST00000503670 TOGARAM1Q9Y4F4 1720 aa11.8□□□□□ -0.52
DDR1-251ENST00000503670 GNAT3A8MTJ3 354 aa11.8□□□□□ -0.52
DDR1-251ENST00000503670 TRIM37O94972 964 aa11.8□□□□□ -0.52
DDR1-251ENST00000503670 CCDC125Q86Z20 511 aa11.8□□□□□ -0.52
DDR1-251ENST00000503670 FAM9BQ8IZU0 186 aa11.8□□□□□ -0.52
DDR1-251ENST00000503670 ACSBG1Q96GR2 724 aa11.8□□□□□ -0.52
DDR1-251ENST00000503670 TNS1Q9HBL0 1735 aaKnown RBP11.8□□□□□ -0.52
DDR1-251ENST00000503670 ADAMTS7Q9UKP4 1686 aa11.79□□□□□ -0.52
DDR1-251ENST00000503670 SF3B2Q13435 895 aaKnown RBP11.79□□□□□ -0.52
DDR1-251ENST00000503670 NFE2L2Q16236 605 aa11.79□□□□□ -0.52
DDR1-251ENST00000503670 MPRIPQ6WCQ1 1025 aa11.79□□□□□ -0.52
DDR1-251ENST00000503670 BCL11BQ9C0K0 894 aaPredicted RBP11.79□□□□□ -0.52
DDR1-251ENST00000503670 BTAF1O14981 1849 aa11.79□□□□□ -0.52
DDR1-251ENST00000503670 KDM6AO15550 1401 aaPredicted RBP11.78□□□□□ -0.52
DDR1-251ENST00000503670 ERVV-2B6SEH9 535 aa11.78□□□□□ -0.52
DDR1-251ENST00000503670 HTATSF1O43719 755 aaKnown RBP11.78□□□□□ -0.52
DDR1-251ENST00000503670 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
DDR1-251ENST00000503670 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
DDR1-251ENST00000503670 UPF1Q92900 1129 aaKnown RBP eCLIP11.78□□□□□ -0.52
DDR1-251ENST00000503670 SYTL4Q96C24 671 aaPredicted RBP11.78□□□□□ -0.52
DDR1-251ENST00000503670 RNMTO43148 476 aaKnown RBP11.77□□□□□ -0.53
DDR1-251ENST00000503670 KCNQ2O43526 872 aa11.77□□□□□ -0.53
DDR1-251ENST00000503670 TMPOP42166 694 aaKnown RBP11.77□□□□□ -0.53
DDR1-251ENST00000503670 APAF1O14727 1248 aa11.76□□□□□ -0.53
DDR1-251ENST00000503670 RIPK4P57078 832 aa11.76□□□□□ -0.53
DDR1-251ENST00000503670 CABP4P57796 275 aa11.76□□□□□ -0.53
DDR1-251ENST00000503670 LMOD3Q0VAK6 560 aa11.76□□□□□ -0.53
DDR1-251ENST00000503670 LGR6Q9HBX8 967 aa11.76□□□□□ -0.53
DDR1-251ENST00000503670 TMOD3Q9NYL9 352 aa11.76□□□□□ -0.53
DDR1-251ENST00000503670 SIPA1L3O60292 1781 aaPredicted RBP11.75□□□□□ -0.53
DDR1-251ENST00000503670 APBA3O96018 575 aa11.75□□□□□ -0.53
DDR1-251ENST00000503670 NEUROD2Q15784 382 aa11.75□□□□□ -0.53
DDR1-251ENST00000503670 PTF1AQ7RTS3 328 aa11.75□□□□□ -0.53
DDR1-251ENST00000503670 IL17REQ8NFR9 667 aa11.75□□□□□ -0.53
DDR1-251ENST00000503670 MRC1P22897 1456 aa11.75□□□□□ -0.53
DDR1-251ENST00000503670 RGPD3A6NKT7 1758 aaPredicted RBP11.74□□□□□ -0.53
DDR1-251ENST00000503670 RGPD4Q7Z3J3 1758 aa11.74□□□□□ -0.53
DDR1-251ENST00000503670 SOCS7O14512 581 aa11.74□□□□□ -0.53
DDR1-251ENST00000503670 BAG6P46379 1132 aa11.74□□□□□ -0.53
DDR1-251ENST00000503670 TEFQ10587 303 aa11.74□□□□□ -0.53
DDR1-251ENST00000503670 MCM10Q7L590 875 aa11.74□□□□□ -0.53
DDR1-251ENST00000503670 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
DDR1-251ENST00000503670 PIGBQ92521 554 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms