RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 IL2RBP14784 551 aa25.9■■□□□ 1.74
LINC01550-201ENST00000499006 GJD4Q96KN9 370 aaPredicted RBP25.9■■□□□ 1.74
LINC01550-201ENST00000499006 QTRT2Q9H974 415 aaKnown RBP25.89■■□□□ 1.73
LINC01550-201ENST00000499006 THSD7AQ9UPZ6 1657 aa25.89■■□□□ 1.73
LINC01550-201ENST00000499006 MAPK8IP3Q9UPT6 1336 aa25.88■■□□□ 1.73
LINC01550-201ENST00000499006 TATP17735 454 aaPredicted RBP25.87■■□□□ 1.73
LINC01550-201ENST00000499006 RGS17Q9UGC6 210 aaPredicted RBP25.87■■□□□ 1.73
LINC01550-201ENST00000499006 LRRC37A3O60309 1634 aa25.87■■□□□ 1.73
LINC01550-201ENST00000499006 APAF1O14727 1248 aa25.85■■□□□ 1.73
LINC01550-201ENST00000499006 NEFMP07197 916 aa25.85■■□□□ 1.73
LINC01550-201ENST00000499006 CDCA7Q9BWT1 371 aaPredicted RBP25.85■■□□□ 1.73
LINC01550-201ENST00000499006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.85■■□□□ 1.73
LINC01550-201ENST00000499006 MTHFSDQ2M296 383 aaKnown RBP25.84■■□□□ 1.73
LINC01550-201ENST00000499006 AMOTQ4VCS5 1084 aa25.84■■□□□ 1.73
LINC01550-201ENST00000499006 PLEKHO1Q53GL0 409 aaPredicted RBP25.83■■□□□ 1.73
LINC01550-201ENST00000499006 TMPOP42166 694 aaKnown RBP25.82■■□□□ 1.72
LINC01550-201ENST00000499006 FAM98CQ17RN3 349 aaKnown RBP25.82■■□□□ 1.72
LINC01550-201ENST00000499006 ONECUT3O60422 494 aaPredicted RBP25.81■■□□□ 1.72
LINC01550-201ENST00000499006 NFE2L2Q16236 605 aa25.81■■□□□ 1.72
LINC01550-201ENST00000499006 GAS2L2Q8NHY3 880 aa25.81■■□□□ 1.72
LINC01550-201ENST00000499006 SPG7Q9UQ90 795 aa25.8■■□□□ 1.72
LINC01550-201ENST00000499006 TNS2Q63HR2 1409 aa25.8■■□□□ 1.72
LINC01550-201ENST00000499006 ZCRB1Q8TBF4 217 aaKnown RBP25.79■■□□□ 1.72
LINC01550-201ENST00000499006 BRWD3Q6RI45 1802 aa25.79■■□□□ 1.72
LINC01550-201ENST00000499006 NCBP3Q53F19 620 aaKnown RBP25.79■■□□□ 1.72
LINC01550-201ENST00000499006 PHF23Q9BUL5 403 aaPredicted RBP25.79■■□□□ 1.72
LINC01550-201ENST00000499006 SCN11AQ9UI33 1791 aa25.78■■□□□ 1.72
LINC01550-201ENST00000499006 ADAMTS7Q9UKP4 1686 aa25.78■■□□□ 1.72
LINC01550-201ENST00000499006 RBM6P78332 1123 aaKnown RBP25.78■■□□□ 1.72
LINC01550-201ENST00000499006 RRP7AQ9Y3A4 280 aaKnown RBP25.78■■□□□ 1.72
LINC01550-201ENST00000499006 SENP3-EIF4A1A0A087X0R7 540 aa25.77■■□□□ 1.72
LINC01550-201ENST00000499006 RIPK4P57078 832 aa25.76■■□□□ 1.71
LINC01550-201ENST00000499006 HNRNPUQ00839 825 aaKnown RBP eCLIP25.76■■□□□ 1.71
LINC01550-201ENST00000499006 ZNF530Q6P9A1 599 aaPredicted RBP25.76■■□□□ 1.71
LINC01550-201ENST00000499006 NGEFQ8N5V2 710 aa25.76■■□□□ 1.71
LINC01550-201ENST00000499006 PCDH11XQ9BZA7 1347 aa25.75■■□□□ 1.71
LINC01550-201ENST00000499006 PCDH11YQ9BZA8 1340 aa25.75■■□□□ 1.71
LINC01550-201ENST00000499006 EXOC5O00471 708 aa25.75■■□□□ 1.71
LINC01550-201ENST00000499006 CYP27B1O15528 508 aa25.75■■□□□ 1.71
LINC01550-201ENST00000499006 NEUROD2Q15784 382 aa25.75■■□□□ 1.71
LINC01550-201ENST00000499006 POTEAQ6S8J7 498 aa25.75■■□□□ 1.71
LINC01550-201ENST00000499006 DDB1Q16531 1140 aa25.74■■□□□ 1.71
LINC01550-201ENST00000499006 AKAP4Q5JQC9 854 aa25.74■■□□□ 1.71
LINC01550-201ENST00000499006 TRIM35Q9UPQ4 493 aa25.74■■□□□ 1.71
LINC01550-201ENST00000499006 MAP3K5Q99683 1374 aa25.74■■□□□ 1.71
LINC01550-201ENST00000499006 CCDC27Q2M243 656 aa25.73■■□□□ 1.71
LINC01550-201ENST00000499006 PHKG2P15735 406 aa25.72■■□□□ 1.71
LINC01550-201ENST00000499006 IFNL2Q8IZJ0 200 aa25.72■■□□□ 1.71
LINC01550-201ENST00000499006 GNAT3A8MTJ3 354 aa25.72■■□□□ 1.71
LINC01550-201ENST00000499006 C1orf141Q5JVX7 400 aa25.72■■□□□ 1.71
LINC01550-201ENST00000499006 HTATSF1O43719 755 aaKnown RBP25.71■■□□□ 1.71
LINC01550-201ENST00000499006 RXRBP28702 533 aa25.71■■□□□ 1.71
LINC01550-201ENST00000499006 SALL2Q9Y467 1007 aaPredicted RBP25.7■■□□□ 1.7
LINC01550-201ENST00000499006 TOGARAM1Q9Y4F4 1720 aa25.7■■□□□ 1.7
LINC01550-201ENST00000499006 ZNF521Q96K83 1311 aa25.69■■□□□ 1.7
LINC01550-201ENST00000499006 SIPA1L3O60292 1781 aaPredicted RBP25.69■■□□□ 1.7
LINC01550-201ENST00000499006 LMOD3Q0VAK6 560 aa25.69■■□□□ 1.7
LINC01550-201ENST00000499006 NKX1-1Q15270 411 aaPredicted RBP25.69■■□□□ 1.7
LINC01550-201ENST00000499006 SEPT12Q8IYM1 358 aa25.69■■□□□ 1.7
LINC01550-201ENST00000499006 DDX54Q8TDD1 881 aaKnown RBP25.69■■□□□ 1.7
LINC01550-201ENST00000499006 YTHDC1Q96MU7 727 aaKnown RBP25.69■■□□□ 1.7
LINC01550-201ENST00000499006 WWC1Q8IX03 1113 aa25.68■■□□□ 1.7
LINC01550-201ENST00000499006 ITGB4P16144 1822 aa25.68■■□□□ 1.7
LINC01550-201ENST00000499006 KDM6AO15550 1401 aaPredicted RBP25.68■■□□□ 1.7
LINC01550-201ENST00000499006 A0A0G2JS52 829 aa25.67■■□□□ 1.7
LINC01550-201ENST00000499006 MYT1Q01538 1121 aa25.67■■□□□ 1.7
LINC01550-201ENST00000499006 ZBED9Q6R2W3 1325 aa25.67■■□□□ 1.7
LINC01550-201ENST00000499006 CEMIPQ8WUJ3 1361 aa25.67■■□□□ 1.7
LINC01550-201ENST00000499006 KAT6BQ8WYB5 2073 aa25.66■■□□□ 1.7
LINC01550-201ENST00000499006 HSP90AB1P08238 724 aaKnown RBP25.66■■□□□ 1.7
LINC01550-201ENST00000499006 MARCH10Q8NA82 808 aaPredicted RBP25.66■■□□□ 1.7
LINC01550-201ENST00000499006 IL17REQ8NFR9 667 aa25.66■■□□□ 1.7
LINC01550-201ENST00000499006 DOT1LQ8TEK3 1739 aa25.65■■□□□ 1.7
LINC01550-201ENST00000499006 SBF2Q86WG5 1849 aa25.65■■□□□ 1.7
LINC01550-201ENST00000499006 DCTN1Q14203 1278 aa25.65■■□□□ 1.7
LINC01550-201ENST00000499006 MPRIPQ6WCQ1 1025 aa25.65■■□□□ 1.7
LINC01550-201ENST00000499006 MCM10Q7L590 875 aa25.65■■□□□ 1.7
LINC01550-201ENST00000499006 RTF1Q92541 710 aaKnown RBP25.65■■□□□ 1.7
LINC01550-201ENST00000499006 RGS12O14924 1447 aa25.65■■□□□ 1.7
LINC01550-201ENST00000499006 DCAF5Q96JK2 942 aa25.64■■□□□ 1.69
LINC01550-201ENST00000499006 LGR6Q9HBX8 967 aa25.64■■□□□ 1.69
LINC01550-201ENST00000499006 RNMTO43148 476 aaKnown RBP25.63■■□□□ 1.69
LINC01550-201ENST00000499006 MRC1P22897 1456 aa25.62■■□□□ 1.69
LINC01550-201ENST00000499006 PDE3BQ13370 1112 aa25.62■■□□□ 1.69
LINC01550-201ENST00000499006 THUMPD2Q9BTF0 503 aaKnown RBP25.62■■□□□ 1.69
LINC01550-201ENST00000499006 WDR63Q8IWG1 891 aa25.61■■□□□ 1.69
LINC01550-201ENST00000499006 EP400Q96L91 3159 aa25.6■■□□□ 1.69
LINC01550-201ENST00000499006 BCL9O00512 1426 aa25.59■■□□□ 1.69
LINC01550-201ENST00000499006 KDM3BQ7LBC6 1761 aa25.57■■□□□ 1.68
LINC01550-201ENST00000499006 KRT27Q7Z3Y8 459 aa25.57■■□□□ 1.68
LINC01550-201ENST00000499006 IL16Q14005 1332 aa25.56■■□□□ 1.68
LINC01550-201ENST00000499006 ERVV-2B6SEH9 535 aa25.56■■□□□ 1.68
LINC01550-201ENST00000499006 CALD1Q05682 793 aaKnown RBP25.56■■□□□ 1.68
LINC01550-201ENST00000499006 NHSQ6T4R5 1651 aa25.55■■□□□ 1.68
LINC01550-201ENST00000499006 GOLGA2Q08379 1002 aa25.54■■□□□ 1.68
LINC01550-201ENST00000499006 SLC52A2Q9HAB3 445 aa25.54■■□□□ 1.68
LINC01550-201ENST00000499006 PAPPAQ13219 1627 aa25.54■■□□□ 1.68
LINC01550-201ENST00000499006 ZNF853P0CG23 659 aa25.53■■□□□ 1.68
LINC01550-201ENST00000499006 SPINK5Q9NQ38 1064 aaPredicted RBP25.53■■□□□ 1.68
LINC01550-201ENST00000499006 TEFQ10587 303 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms