RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 RAPGEF4Q8WZA2 1011 aa19.14■□□□□ 0.65
SHANK2-217ENST00000498519 CCNL1Q9UK58 526 aaPredicted RBP19.14■□□□□ 0.65
SHANK2-217ENST00000498519 PNPLA7Q6ZV29 1317 aa19.14■□□□□ 0.65
SHANK2-217ENST00000498519 LTN1O94822 1766 aa19.14■□□□□ 0.65
SHANK2-217ENST00000498519 TMF1P82094 1093 aa19.13■□□□□ 0.65
SHANK2-217ENST00000498519 CDCA8Q53HL2 280 aa19.13■□□□□ 0.65
SHANK2-217ENST00000498519 USP47Q96K76 1375 aa19.13■□□□□ 0.65
SHANK2-217ENST00000498519 FAM208AQ9UK61 1670 aaKnown RBP19.12■□□□□ 0.65
SHANK2-217ENST00000498519 BTAF1O14981 1849 aa19.11■□□□□ 0.65
SHANK2-217ENST00000498519 MSH5O43196 834 aa19.1■□□□□ 0.65
SHANK2-217ENST00000498519 GRIN3BO60391 1043 aa19.1■□□□□ 0.65
SHANK2-217ENST00000498519 TATP17735 454 aaPredicted RBP19.1■□□□□ 0.65
SHANK2-217ENST00000498519 FLAD1Q8NFF5 587 aa19.1■□□□□ 0.65
SHANK2-217ENST00000498519 C1QTNF8P60827 252 aa19.09■□□□□ 0.65
SHANK2-217ENST00000498519 NBPF6Q5VWK0 638 aa19.09■□□□□ 0.65
SHANK2-217ENST00000498519 PELP1Q8IZL8 1130 aaKnown RBP19.09■□□□□ 0.65
SHANK2-217ENST00000498519 NBPF4Q96M43 638 aa19.09■□□□□ 0.65
SHANK2-217ENST00000498519 KIF24Q5T7B8 1368 aa19.08■□□□□ 0.65
SHANK2-217ENST00000498519 PCDH11XQ9BZA7 1347 aa19.08■□□□□ 0.65
SHANK2-217ENST00000498519 PCDH11YQ9BZA8 1340 aa19.08■□□□□ 0.65
SHANK2-217ENST00000498519 FYB1O15117 783 aa19.08■□□□□ 0.64
SHANK2-217ENST00000498519 RRS1Q15050 365 aaKnown RBP19.08■□□□□ 0.64
SHANK2-217ENST00000498519 NSD2O96028 1365 aa19.07■□□□□ 0.64
SHANK2-217ENST00000498519 MEGF6O75095 1541 aa19.06■□□□□ 0.64
SHANK2-217ENST00000498519 KCNQ4P56696 695 aa19.06■□□□□ 0.64
SHANK2-217ENST00000498519 GGNBP2Q9H3C7 697 aa19.06■□□□□ 0.64
SHANK2-217ENST00000498519 SENP3-EIF4A1A0A087X0R7 540 aa19.05■□□□□ 0.64
SHANK2-217ENST00000498519 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
SHANK2-217ENST00000498519 FBLN1P23142 703 aa19.05■□□□□ 0.64
SHANK2-217ENST00000498519 INSRP06213 1382 aa19.05■□□□□ 0.64
SHANK2-217ENST00000498519 FLT4P35916 1363 aa19.05■□□□□ 0.64
SHANK2-217ENST00000498519 SMARCC1Q92922 1105 aaPredicted RBP19.04■□□□□ 0.64
SHANK2-217ENST00000498519 COL23A1Q86Y22 540 aaPredicted RBP19.03■□□□□ 0.64
SHANK2-217ENST00000498519 USHBP1Q8N6Y0 703 aa19.02■□□□□ 0.64
SHANK2-217ENST00000498519 CD2APQ9Y5K6 639 aa19.02■□□□□ 0.64
SHANK2-217ENST00000498519 GOLGB1Q14789 3259 aaKnown RBP19.02■□□□□ 0.64
SHANK2-217ENST00000498519 QSER1Q2KHR3 1735 aa19.02■□□□□ 0.63
SHANK2-217ENST00000498519 HSP90AB2PQ58FF8 381 aa19.01■□□□□ 0.63
SHANK2-217ENST00000498519 NLGN2Q8NFZ4 835 aa19.01■□□□□ 0.63
SHANK2-217ENST00000498519 MPRIPQ6WCQ1 1025 aa19■□□□□ 0.63
SHANK2-217ENST00000498519 PALLDQ8WX93 1383 aa19■□□□□ 0.63
SHANK2-217ENST00000498519 NSD3Q9BZ95 1437 aa18.99■□□□□ 0.63
SHANK2-217ENST00000498519 AK7Q96M32 723 aa18.98■□□□□ 0.63
SHANK2-217ENST00000498519 SPG7Q9UQ90 795 aa18.98■□□□□ 0.63
SHANK2-217ENST00000498519 KAT6BQ8WYB5 2073 aa18.97■□□□□ 0.63
SHANK2-217ENST00000498519 DOT1LQ8TEK3 1739 aa18.97■□□□□ 0.63
SHANK2-217ENST00000498519 MSL1Q68DK7 614 aa18.96■□□□□ 0.63
SHANK2-217ENST00000498519 LY75O60449 1722 aa18.96■□□□□ 0.63
SHANK2-217ENST00000498519 CHD4Q14839 1912 aa18.96■□□□□ 0.63
SHANK2-217ENST00000498519 CYP27B1O15528 508 aa18.95■□□□□ 0.62
SHANK2-217ENST00000498519 YBX3P16989 372 aaKnown RBP eCLIP18.95■□□□□ 0.62
SHANK2-217ENST00000498519 NKX1-1Q15270 411 aaPredicted RBP18.95■□□□□ 0.62
SHANK2-217ENST00000498519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.95■□□□□ 0.626e-6■□□□□ 8.9
SHANK2-217ENST00000498519 COL24A1Q17RW2 1714 aa18.94■□□□□ 0.62
SHANK2-217ENST00000498519 PPM1GO15355 546 aaPredicted RBP18.93■□□□□ 0.62
SHANK2-217ENST00000498519 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
SHANK2-217ENST00000498519 SSFA2P28290 1259 aa18.92■□□□□ 0.62
SHANK2-217ENST00000498519 PIGBQ92521 554 aa18.92■□□□□ 0.62
SHANK2-217ENST00000498519 EMILIN1Q9Y6C2 1016 aa18.92■□□□□ 0.62
SHANK2-217ENST00000498519 WASHC2AQ641Q2 1341 aa18.92■□□□□ 0.62
SHANK2-217ENST00000498519 TMOD3Q9NYL9 352 aa18.91■□□□□ 0.62
SHANK2-217ENST00000498519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.9■□□□□ 0.62
SHANK2-217ENST00000498519 CARD14Q9BXL6 1004 aa18.9■□□□□ 0.62
SHANK2-217ENST00000498519 SHANK3Q9BYB0 1731 aa18.9■□□□□ 0.62
SHANK2-217ENST00000498519 LOC102724428A0A0B4J2F2 783 aa18.89■□□□□ 0.61
SHANK2-217ENST00000498519 SIK1P57059 783 aa18.89■□□□□ 0.61
SHANK2-217ENST00000498519 IFNL2Q8IZJ0 200 aa18.89■□□□□ 0.61
SHANK2-217ENST00000498519 GPBP1L1Q9HC44 474 aaPredicted RBP18.89■□□□□ 0.61
SHANK2-217ENST00000498519 PLEKHG2Q9H7P9 1386 aa18.89■□□□□ 0.61
SHANK2-217ENST00000498519 PHF14O94880 888 aa18.88■□□□□ 0.61
SHANK2-217ENST00000498519 NCAPD2Q15021 1401 aa18.88■□□□□ 0.61
SHANK2-217ENST00000498519 ATP10DQ9P241 1426 aa18.86■□□□□ 0.61
SHANK2-217ENST00000498519 TRIM26Q12899 539 aaPredicted RBP18.86■□□□□ 0.61
SHANK2-217ENST00000498519 EYA1Q99502 592 aa18.86■□□□□ 0.61
SHANK2-217ENST00000498519 C5P01031 1676 aa18.85■□□□□ 0.61
SHANK2-217ENST00000498519 ATP6V1AP38606 617 aa18.85■□□□□ 0.61
SHANK2-217ENST00000498519 TUBGCP6Q96RT7 1819 aa18.84■□□□□ 0.61
SHANK2-217ENST00000498519 RGPD2P0DJD1 1756 aa18.84■□□□□ 0.61
SHANK2-217ENST00000498519 IGSF1Q8N6C5 1336 aa18.84■□□□□ 0.61
SHANK2-217ENST00000498519 GNPATO15228 680 aa18.84■□□□□ 0.61
SHANK2-217ENST00000498519 HSP90AB1P08238 724 aaKnown RBP18.84■□□□□ 0.61
SHANK2-217ENST00000498519 PHKG2P15735 406 aa18.84■□□□□ 0.61
SHANK2-217ENST00000498519 LINC00116Q8NCU8 138 aa18.83■□□□□ 0.6
SHANK2-217ENST00000498519 POLKQ9UBT6 870 aa18.83■□□□□ 0.6
SHANK2-217ENST00000498519 ASAP1Q9ULH1 1129 aa18.82■□□□□ 0.6
SHANK2-217ENST00000498519 C4BP0C0L5 1744 aa18.82■□□□□ 0.6
SHANK2-217ENST00000498519 ERVV-2B6SEH9 535 aa18.81■□□□□ 0.6
SHANK2-217ENST00000498519 NLGN1Q8N2Q7 840 aa18.81■□□□□ 0.6
SHANK2-217ENST00000498519 RTCBQ9Y3I0 505 aaKnown RBP18.81■□□□□ 0.6
SHANK2-217ENST00000498519 KIF20BQ96Q89 1820 aa18.81■□□□□ 0.6
SHANK2-217ENST00000498519 ADRA2BP18089 450 aa18.8■□□□□ 0.6
SHANK2-217ENST00000498519 TRAPPC3LQ5T215 181 aa18.8■□□□□ 0.6
SHANK2-217ENST00000498519 AMIGO3Q86WK7 504 aa18.8■□□□□ 0.6
SHANK2-217ENST00000498519 ATG3Q9NT62 314 aa18.8■□□□□ 0.6
SHANK2-217ENST00000498519 ADCY9O60503 1353 aa18.8■□□□□ 0.6
SHANK2-217ENST00000498519 TGFB2P61812 414 aa18.79■□□□□ 0.6
SHANK2-217ENST00000498519 DCAF5Q96JK2 942 aa18.79■□□□□ 0.6
SHANK2-217ENST00000498519 PKD1L3Q7Z443 1732 aa18.79■□□□□ 0.6
SHANK2-217ENST00000498519 CLSPNQ9HAW4 1339 aa18.78■□□□□ 0.6
SHANK2-217ENST00000498519 MMP10P09238 476 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms