RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 CCDC27Q2M243 656 aa6.22□□□□□ -1.41
CALD1-224ENST00000498254 TSGA10IPQ3SY00 556 aa6.22□□□□□ -1.41
CALD1-224ENST00000498254 LINC01559Q495D7 138 aa6.22□□□□□ -1.41
CALD1-224ENST00000498254 PTCRAQ6ISU1 281 aaPredicted RBP6.22□□□□□ -1.41
CALD1-224ENST00000498254 SND1Q7KZF4 910 aaKnown RBP eCLIP6.22□□□□□ -1.41
CALD1-224ENST00000498254 CYP4X1Q8N118 509 aa6.22□□□□□ -1.41
CALD1-224ENST00000498254 TMEM151AQ8N4L1 468 aa6.22□□□□□ -1.41
CALD1-224ENST00000498254 GMPR2Q9P2T1 348 aaKnown RBP6.22□□□□□ -1.41
CALD1-224ENST00000498254 FAM196BA6NMK8 535 aa6.21□□□□□ -1.42
CALD1-224ENST00000498254 TERTO14746 1132 aaKnown RBP6.21□□□□□ -1.42
CALD1-224ENST00000498254 PTK7Q13308 1070 aa6.21□□□□□ -1.42
CALD1-224ENST00000498254 AGERQ15109 404 aa6.21□□□□□ -1.42
CALD1-224ENST00000498254 CTC1Q2NKJ3 1217 aa6.21□□□□□ -1.42
CALD1-224ENST00000498254 EML3Q32P44 896 aa6.21□□□□□ -1.42
CALD1-224ENST00000498254 OXLD1Q5BKU9 147 aa6.21□□□□□ -1.42
CALD1-224ENST00000498254 B4GALNT3Q6L9W6 998 aa6.21□□□□□ -1.42
CALD1-224ENST00000498254 DZIP3Q86Y13 1208 aaKnown RBP6.21□□□□□ -1.42
CALD1-224ENST00000498254 GPSM3Q9Y4H4 160 aa6.21□□□□□ -1.42
CALD1-224ENST00000498254 ATP5J2-PTCD1G3V325 749 aa6.2□□□□□ -1.42
CALD1-224ENST00000498254 SMCPP49901 116 aaPredicted RBP6.2□□□□□ -1.42
CALD1-224ENST00000498254 OGFOD1Q8N543 542 aa6.2□□□□□ -1.42
CALD1-224ENST00000498254 FAM200AQ8TCP9 573 aa6.2□□□□□ -1.42
CALD1-224ENST00000498254 GPKOWQ92917 476 aaPredicted RBP eCLIP6.2□□□□□ -1.42
CALD1-224ENST00000498254 SLAIN2Q9P270 581 aa6.2□□□□□ -1.42
CALD1-224ENST00000498254 LGR5O75473 907 aa6.19□□□□□ -1.42
CALD1-224ENST00000498254 SCNN1AP37088 669 aa6.19□□□□□ -1.42
CALD1-224ENST00000498254 CLDN10P78369 228 aa6.19□□□□□ -1.42
CALD1-224ENST00000498254 DPYDQ12882 1025 aa6.19□□□□□ -1.42
CALD1-224ENST00000498254 PHLDB3Q6NSJ2 640 aa6.19□□□□□ -1.42
CALD1-224ENST00000498254 SH3BP5LQ7L8J4 393 aa6.19□□□□□ -1.42
CALD1-224ENST00000498254 ANKMY2Q8IV38 441 aa6.19□□□□□ -1.42
CALD1-224ENST00000498254 PHTF2Q8N3S3 785 aa6.19□□□□□ -1.42
CALD1-224ENST00000498254 FOXJ1Q92949 421 aa6.19□□□□□ -1.42
CALD1-224ENST00000498254 DOLKQ9UPQ8 538 aa6.19□□□□□ -1.42
CALD1-224ENST00000498254 FCF1Q9Y324 198 aaKnown RBP6.19□□□□□ -1.42
CALD1-224ENST00000498254 LCE2CQ5TA81 110 aa6.18□□□□□ -1.42
CALD1-224ENST00000498254 CCER1Q8TC90 406 aaPredicted RBP6.18□□□□□ -1.42
CALD1-224ENST00000498254 BAP1Q92560 729 aa6.18□□□□□ -1.42
CALD1-224ENST00000498254 ZNF592Q92610 1267 aa6.18□□□□□ -1.42
CALD1-224ENST00000498254 CCDC85AQ96PX6 553 aaPredicted RBP6.18□□□□□ -1.42
CALD1-224ENST00000498254 GIGYF1O75420 1035 aaPredicted RBP6.17□□□□□ -1.42
CALD1-224ENST00000498254 ATP2B4P23634 1241 aa6.17□□□□□ -1.42
CALD1-224ENST00000498254 SERPINB4P48594 390 aa6.17□□□□□ -1.42
CALD1-224ENST00000498254 RAB15P59190 212 aa6.17□□□□□ -1.42
CALD1-224ENST00000498254 DNAAF2Q9NVR5 837 aaKnown RBP6.17□□□□□ -1.42
CALD1-224ENST00000498254 KIAA1024Q9UPX6 916 aa6.17□□□□□ -1.42
CALD1-224ENST00000498254 GNEQ9Y223 722 aaKnown RBP6.17□□□□□ -1.42
CALD1-224ENST00000498254 NOD1Q9Y239 953 aa6.17□□□□□ -1.42
CALD1-224ENST00000498254 TTC24A2A3L6 582 aaPredicted RBP6.16□□□□□ -1.42
CALD1-224ENST00000498254 PRMT3O60678 531 aa6.16□□□□□ -1.42
CALD1-224ENST00000498254 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
CALD1-224ENST00000498254 SSFA2P28290 1259 aa6.16□□□□□ -1.42
CALD1-224ENST00000498254 MCCD1P59942 119 aaPredicted RBP6.16□□□□□ -1.42
CALD1-224ENST00000498254 GTF2IP78347 998 aa6.16□□□□□ -1.42
CALD1-224ENST00000498254 PSME1Q06323 249 aa6.16□□□□□ -1.42
CALD1-224ENST00000498254 FAM69CQ0P6D2 419 aa6.16□□□□□ -1.42
CALD1-224ENST00000498254 MAP7D1Q3KQU3 841 aa6.16□□□□□ -1.42
CALD1-224ENST00000498254 TXNDC2Q86VQ3 553 aa6.16□□□□□ -1.42
CALD1-224ENST00000498254 SLC10A4Q96EP9 437 aa6.16□□□□□ -1.42
CALD1-224ENST00000498254 CDCA7Q9BWT1 371 aaPredicted RBP6.16□□□□□ -1.42
CALD1-224ENST00000498254 GDF11O95390 407 aa6.15□□□□□ -1.42
CALD1-224ENST00000498254 ERFEQ4G0M1 354 aa6.15□□□□□ -1.42
CALD1-224ENST00000498254 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.42
CALD1-224ENST00000498254 TRIM50Q86XT4 487 aa6.15□□□□□ -1.42
CALD1-224ENST00000498254 CLP1Q92989 425 aaKnown RBP6.15□□□□□ -1.42
CALD1-224ENST00000498254 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.42
CALD1-224ENST00000498254 SFI1A8K8P3 1242 aa6.14□□□□□ -1.43
CALD1-224ENST00000498254 ZBTB24O43167 697 aaPredicted RBP6.14□□□□□ -1.43
CALD1-224ENST00000498254 LZTS3O60299 673 aaPredicted RBP6.14□□□□□ -1.43
CALD1-224ENST00000498254 ARID4AP29374 1257 aaPredicted RBP6.14□□□□□ -1.43
CALD1-224ENST00000498254 ATP1A2P50993 1020 aa6.14□□□□□ -1.43
CALD1-224ENST00000498254 SH3RF1Q7Z6J0 888 aa6.14□□□□□ -1.43
CALD1-224ENST00000498254 BPHLQ86WA6 291 aaPredicted RBP6.14□□□□□ -1.43
CALD1-224ENST00000498254 ZNF511Q8NB15 262 aa6.14□□□□□ -1.43
CALD1-224ENST00000498254 TPCN2Q8NHX9 752 aa6.14□□□□□ -1.43
CALD1-224ENST00000498254 SLC16A10Q8TF71 515 aa6.14□□□□□ -1.43
CALD1-224ENST00000498254 PRIMPOLQ96LW4 560 aa6.14□□□□□ -1.43
CALD1-224ENST00000498254 CHIC2Q9UKJ5 165 aa6.14□□□□□ -1.43
CALD1-224ENST00000498254 RBM19Q9Y4C8 960 aaKnown RBP6.14□□□□□ -1.43
CALD1-224ENST00000498254 PCDHB11Q9Y5F2 797 aa6.14□□□□□ -1.43
CALD1-224ENST00000498254 WNT7AO00755 349 aa6.13□□□□□ -1.43
CALD1-224ENST00000498254 IGHA1P01876 353 aa6.13□□□□□ -1.43
CALD1-224ENST00000498254 SMPD1P17405 629 aa6.13□□□□□ -1.43
CALD1-224ENST00000498254 CCDC102BQ68D86 513 aa6.13□□□□□ -1.43
CALD1-224ENST00000498254 SNIP1Q8TAD8 396 aaKnown RBP6.13□□□□□ -1.43
CALD1-224ENST00000498254 ATP13A2Q9NQ11 1180 aa6.13□□□□□ -1.43
CALD1-224ENST00000498254 BIN2Q9UBW5 565 aaPredicted RBP6.13□□□□□ -1.43
CALD1-224ENST00000498254 ZBTB7BO15156 539 aaPredicted RBP6.12□□□□□ -1.43
CALD1-224ENST00000498254 ABL1P00519 1130 aa6.12□□□□□ -1.43
CALD1-224ENST00000498254 SNRPBP14678 240 aaKnown RBP6.12□□□□□ -1.43
CALD1-224ENST00000498254 SWI5Q1ZZU3 235 aa6.12□□□□□ -1.43
CALD1-224ENST00000498254 KRTAP4-12Q9BQ66 201 aa6.12□□□□□ -1.43
CALD1-224ENST00000498254 SENP2Q9HC62 589 aa6.12□□□□□ -1.43
CALD1-224ENST00000498254 ANO2Q9NQ90 1003 aa6.12□□□□□ -1.43
CALD1-224ENST00000498254 SOWAHDA6NJG2 315 aa6.11□□□□□ -1.43
CALD1-224ENST00000498254 SEC13P55735 322 aa6.11□□□□□ -1.43
CALD1-224ENST00000498254 SH3BP2P78314 561 aa6.11□□□□□ -1.43
CALD1-224ENST00000498254 ZNF211Q13398 564 aaPredicted RBP6.11□□□□□ -1.43
CALD1-224ENST00000498254 SIX5Q8N196 739 aa6.11□□□□□ -1.43
CALD1-224ENST00000498254 LARGE2Q8N3Y3 721 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms