RNA–Protein interactions for RNA: ENST00000497163.1

CPS1-209, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-209ENST00000497163 DDRGK1Q96HY6 314 aa8.03□□□□□ -1.12
CPS1-209ENST00000497163 KDM4CQ9H3R0 1056 aa8.03□□□□□ -1.12
CPS1-209ENST00000497163 GMCL1Q96IK5 515 aa8.02□□□□□ -1.13
CPS1-209ENST00000497163 GPBP1L1Q9HC44 474 aaPredicted RBP8.02□□□□□ -1.13
CPS1-209ENST00000497163 PRICKLE2Q7Z3G6 844 aa8.01□□□□□ -1.13
CPS1-209ENST00000497163 TRIM22Q8IYM9 498 aa8.01□□□□□ -1.13
CPS1-209ENST00000497163 ZNF837Q96EG3 531 aaPredicted RBP8.01□□□□□ -1.13
CPS1-209ENST00000497163 CYLDQ9NQC7 956 aa8.01□□□□□ -1.13
CPS1-209ENST00000497163 RHOQP17081 205 aa8□□□□□ -1.13
CPS1-209ENST00000497163 GPC1P35052 558 aa8□□□□□ -1.13
CPS1-209ENST00000497163 MAP3K10Q02779 954 aa8□□□□□ -1.13
CPS1-209ENST00000497163 TRIM34Q9BYJ4 488 aa8□□□□□ -1.13
CPS1-209ENST00000497163 MBIPQ9NS73 344 aa8□□□□□ -1.13
CPS1-209ENST00000497163 DBN1Q16643 649 aa7.99□□□□□ -1.13
CPS1-209ENST00000497163 RFC5P40937 340 aa7.98□□□□□ -1.13
CPS1-209ENST00000497163 ENAMQ9NRM1 1142 aa7.98□□□□□ -1.13
CPS1-209ENST00000497163 IGF1RP08069 1367 aa7.97□□□□□ -1.13
CPS1-209ENST00000497163 ATP5J2-PTCD1G3V325 749 aa7.97□□□□□ -1.13
CPS1-209ENST00000497163 GIGYF1O75420 1035 aaPredicted RBP7.97□□□□□ -1.13
CPS1-209ENST00000497163 TRIM52Q96A61 297 aa7.97□□□□□ -1.13
CPS1-209ENST00000497163 DYRK1BQ9Y463 629 aa7.97□□□□□ -1.13
CPS1-209ENST00000497163 GPR25O00155 361 aa7.96□□□□□ -1.14
CPS1-209ENST00000497163 ITGB2P05107 769 aa7.96□□□□□ -1.14
CPS1-209ENST00000497163 ATP1B4Q9UN42 357 aaPredicted RBP7.96□□□□□ -1.14
CPS1-209ENST00000497163 CNTNAP5Q8WYK1 1306 aa7.96□□□□□ -1.14
CPS1-209ENST00000497163 A0A1W2PRU2 124 aa7.95□□□□□ -1.14
CPS1-209ENST00000497163 ZBBXA8MT70 800 aa7.95□□□□□ -1.14
CPS1-209ENST00000497163 ERVK-9P63128 1117 aa7.95□□□□□ -1.14
CPS1-209ENST00000497163 CCDC125Q86Z20 511 aa7.95□□□□□ -1.14
CPS1-209ENST00000497163 DCAF5Q96JK2 942 aa7.95□□□□□ -1.14
CPS1-209ENST00000497163 PHF20L1A8MW92 1017 aa7.94□□□□□ -1.14
CPS1-209ENST00000497163 BCRP11274 1271 aa7.94□□□□□ -1.14
CPS1-209ENST00000497163 PLA2G4EQ3MJ16 856 aa7.94□□□□□ -1.14
CPS1-209ENST00000497163 FOXR1Q6PIV2 292 aa7.94□□□□□ -1.14
CPS1-209ENST00000497163 ACDQ96AP0 544 aa7.94□□□□□ -1.14
CPS1-209ENST00000497163 GRIP2Q9C0E4 1043 aa7.94□□□□□ -1.14
CPS1-209ENST00000497163 LRRC4BQ9NT99 713 aa7.94□□□□□ -1.14
CPS1-209ENST00000497163 H7C1W4 665 aa7.93□□□□□ -1.14
CPS1-209ENST00000497163 MEN1O00255 615 aa7.93□□□□□ -1.14
CPS1-209ENST00000497163 POU4F2Q12837 409 aa7.93□□□□□ -1.14
CPS1-209ENST00000497163 CC2D2BQ6DHV5 1058 aa7.93□□□□□ -1.14
CPS1-209ENST00000497163 GTPBP3Q969Y2 492 aaKnown RBP7.93□□□□□ -1.14
CPS1-209ENST00000497163 GJD4Q96KN9 370 aaPredicted RBP7.93□□□□□ -1.14
CPS1-209ENST00000497163 SPATA31C2B4DYI2 1134 aa7.92□□□□□ -1.14
CPS1-209ENST00000497163 FBXO45P0C2W1 286 aa7.92□□□□□ -1.14
CPS1-209ENST00000497163 WDR44Q5JSH3 913 aa7.92□□□□□ -1.14
CPS1-209ENST00000497163 RIPOR1Q6ZS17 1223 aa7.92□□□□□ -1.14
CPS1-209ENST00000497163 BEND7Q8N7W2 519 aaPredicted RBP7.92□□□□□ -1.14
CPS1-209ENST00000497163 GOPCQ9HD26 462 aa7.92□□□□□ -1.14
CPS1-209ENST00000497163 PCDHB9Q9Y5E1 797 aa7.92□□□□□ -1.14
CPS1-209ENST00000497163 MSTNO14793 375 aa7.91□□□□□ -1.14
CPS1-209ENST00000497163 CLN3Q13286 438 aa7.91□□□□□ -1.14
CPS1-209ENST00000497163 TMEM259Q4ZIN3 620 aa7.91□□□□□ -1.14
CPS1-209ENST00000497163 NBPF10Q6P3W6 841 aaKnown RBP7.91□□□□□ -1.14
CPS1-209ENST00000497163 NBPF15Q8N660 670 aa7.91□□□□□ -1.14
CPS1-209ENST00000497163 GAS2L1Q99501 681 aaPredicted RBP7.9□□□□□ -1.14
CPS1-209ENST00000497163 SPOCK3Q9BQ16 436 aa7.9□□□□□ -1.14
CPS1-209ENST00000497163 TRAK2O60296 914 aa7.89□□□□□ -1.15
CPS1-209ENST00000497163 ADAM23O75077 832 aa7.89□□□□□ -1.15
CPS1-209ENST00000497163 PROCP04070 461 aa7.89□□□□□ -1.15
CPS1-209ENST00000497163 SCTRP47872 440 aa7.89□□□□□ -1.15
CPS1-209ENST00000497163 SLC27A3Q5K4L6 730 aa7.89□□□□□ -1.15
CPS1-209ENST00000497163 RNF20Q5VTR2 975 aa7.89□□□□□ -1.15
CPS1-209ENST00000497163 NEDD1Q8NHV4 660 aa7.89□□□□□ -1.15
CPS1-209ENST00000497163 TRERF1Q96PN7 1200 aa7.89□□□□□ -1.15
CPS1-209ENST00000497163 OIP5O43482 229 aa7.88□□□□□ -1.15
CPS1-209ENST00000497163 THBS1P07996 1170 aa7.88□□□□□ -1.15
CPS1-209ENST00000497163 MX2P20592 715 aa7.88□□□□□ -1.15
CPS1-209ENST00000497163 MCCD1P59942 119 aaPredicted RBP7.88□□□□□ -1.15
CPS1-209ENST00000497163 CYP2U1Q7Z449 544 aa7.88□□□□□ -1.15
CPS1-209ENST00000497163 NLRP3Q96P20 1036 aa7.88□□□□□ -1.15
CPS1-209ENST00000497163 OSBPL3Q9H4L5 887 aa7.88□□□□□ -1.15
CPS1-209ENST00000497163 F11P03951 625 aa7.87□□□□□ -1.15
CPS1-209ENST00000497163 PODNQ7Z5L7 613 aa7.87□□□□□ -1.15
CPS1-209ENST00000497163 WASLO00401 505 aaPredicted RBP7.86□□□□□ -1.15
CPS1-209ENST00000497163 NUCKS1Q9H1E3 243 aaKnown RBP7.86□□□□□ -1.15
CPS1-209ENST00000497163 TIMMDC1Q9NPL8 285 aa7.86□□□□□ -1.15
CPS1-209ENST00000497163 NR1H3Q13133 447 aa7.85□□□□□ -1.15
CPS1-209ENST00000497163 TAS1R3Q7RTX0 852 aa7.85□□□□□ -1.15
CPS1-209ENST00000497163 CFHR5Q9BXR6 569 aa7.85□□□□□ -1.15
CPS1-209ENST00000497163 ARHGEF10LQ9HCE6 1279 aa7.85□□□□□ -1.15
CPS1-209ENST00000497163 NSFL1CQ9UNZ2 370 aaKnown RBP7.85□□□□□ -1.15
CPS1-209ENST00000497163 GPR37L1O60883 481 aa7.84□□□□□ -1.15
CPS1-209ENST00000497163 MAP2K3P46734 347 aa7.84□□□□□ -1.15
CPS1-209ENST00000497163 PCMTD1Q96MG8 357 aaPredicted RBP7.84□□□□□ -1.15
CPS1-209ENST00000497163 OXCT2Q9BYC2 517 aaPredicted RBP7.84□□□□□ -1.15
CPS1-209ENST00000497163 HRH3Q9Y5N1 445 aa7.84□□□□□ -1.15
CPS1-209ENST00000497163 SNRPNP63162 240 aaKnown RBP7.83□□□□□ -1.16
CPS1-209ENST00000497163 UBAP2LQ14157 1087 aaKnown RBP7.83□□□□□ -1.16
CPS1-209ENST00000497163 XP32Q5T750 250 aa7.83□□□□□ -1.16
CPS1-209ENST00000497163 C1orf229Q6ZS94 237 aaPredicted RBP7.83□□□□□ -1.16
CPS1-209ENST00000497163 ESYT1Q9BSJ8 1104 aa7.83□□□□□ -1.16
CPS1-209ENST00000497163 PCDHB11Q9Y5F2 797 aa7.83□□□□□ -1.16
CPS1-209ENST00000497163 SHISA8B8ZZ34 492 aa7.82□□□□□ -1.16
CPS1-209ENST00000497163 GNRH1P01148 92 aa7.82□□□□□ -1.16
CPS1-209ENST00000497163 IL2RAP01589 272 aa7.82□□□□□ -1.16
CPS1-209ENST00000497163 ZNF592Q92610 1267 aa7.82□□□□□ -1.16
CPS1-209ENST00000497163 KRBA1A5PL33 1030 aa7.81□□□□□ -1.16
CPS1-209ENST00000497163 CENPCQ03188 943 aa7.81□□□□□ -1.16
CPS1-209ENST00000497163 CNKSR1Q969H4 720 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms