RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 TNS2Q63HR2 1409 aa21.42■■□□□ 1.02
CBX4-204ENST00000495122 CARD10Q9BWT7 1032 aa21.42■■□□□ 1.02
CBX4-204ENST00000495122 BTAF1O14981 1849 aa21.41■■□□□ 1.02
CBX4-204ENST00000495122 APBA3O96018 575 aa21.41■■□□□ 1.02
CBX4-204ENST00000495122 DDB1Q16531 1140 aa21.41■■□□□ 1.02
CBX4-204ENST00000495122 BCL9O00512 1426 aa21.4■■□□□ 1.02
CBX4-204ENST00000495122 ZNF521Q96K83 1311 aa21.4■■□□□ 1.02
CBX4-204ENST00000495122 CDCA7Q9BWT1 371 aaPredicted RBP21.39■■□□□ 1.01
CBX4-204ENST00000495122 CASZ1Q86V15 1759 aa21.38■■□□□ 1.01
CBX4-204ENST00000495122 ERBB3P21860 1342 aa21.38■■□□□ 1.01
CBX4-204ENST00000495122 FYB1O15117 783 aa21.38■■□□□ 1.01
CBX4-204ENST00000495122 CSB-PGBD3P0DP91 1061 aa21.38■■□□□ 1.01
CBX4-204ENST00000495122 PPP4R2Q9NY27 417 aa21.37■■□□□ 1.01
CBX4-204ENST00000495122 MTHFSP49914 203 aa21.36■■□□□ 1.01
CBX4-204ENST00000495122 COL3A1P02461 1466 aaPredicted RBP21.35■■□□□ 1.01
CBX4-204ENST00000495122 R3HDM1Q15032 1099 aaKnown RBP21.35■■□□□ 1.01
CBX4-204ENST00000495122 MARCH10Q8NA82 808 aaPredicted RBP21.35■■□□□ 1.01
CBX4-204ENST00000495122 DOT1LQ8TEK3 1739 aa21.35■■□□□ 1.01
CBX4-204ENST00000495122 MAP2P11137 1827 aaKnown RBP21.34■■□□□ 1.01
CBX4-204ENST00000495122 GOLGA2Q08379 1002 aa21.33■■□□□ 1.01
CBX4-204ENST00000495122 RUNDC1Q96C34 613 aa21.33■■□□□ 1.01
CBX4-204ENST00000495122 RCAN3Q9UKA8 241 aa21.33■■□□□ 1.01
CBX4-204ENST00000495122 ANKRD24Q8TF21 1146 aa21.31■■□□□ 1
CBX4-204ENST00000495122 PNNQ9H307 717 aaKnown RBP21.3■■□□□ 1
CBX4-204ENST00000495122 GGNBP2Q9H3C7 697 aa21.3■■□□□ 1
CBX4-204ENST00000495122 CCDC27Q2M243 656 aa21.29■■□□□ 1
CBX4-204ENST00000495122 PTF1AQ7RTS3 328 aa21.29■■□□□ 1
CBX4-204ENST00000495122 BCL11BQ9C0K0 894 aaPredicted RBP21.29■■□□□ 1
CBX4-204ENST00000495122 PAPPAQ13219 1627 aa21.29■■□□□ 1
CBX4-204ENST00000495122 E9PSI1 815 aa21.28■■□□□ 1
CBX4-204ENST00000495122 EXOC5O00471 708 aa21.28■■□□□ 1
CBX4-204ENST00000495122 PLSCR1O15162 318 aa21.28■■□□□ 1
CBX4-204ENST00000495122 RRP1P56182 461 aaKnown RBP21.28■■□□□ 1
CBX4-204ENST00000495122 TRMT2AQ8IZ69 625 aaKnown RBP21.28■■□□□ 1
CBX4-204ENST00000495122 COG3Q96JB2 828 aa21.28■■□□□ 1
CBX4-204ENST00000495122 NLRP2Q9NX02 1062 aa21.28■■□□□ 1
CBX4-204ENST00000495122 QSER1Q2KHR3 1735 aa21.28■■□□□ 1
CBX4-204ENST00000495122 TUBGCP6Q96RT7 1819 aa21.27■■□□□ 1
CBX4-204ENST00000495122 LY75O60449 1722 aa21.27■■□□□ 1
CBX4-204ENST00000495122 APAF1O14727 1248 aa21.27■■□□□ 1
CBX4-204ENST00000495122 TNNT2P45379 298 aaPredicted RBP21.27■■□□□ 1
CBX4-204ENST00000495122 IP6K1Q92551 441 aa21.27■■□□□ 1
CBX4-204ENST00000495122 RTL1A6NKG5 1358 aa21.26■□□□□ 0.99
CBX4-204ENST00000495122 SLFN5Q08AF3 891 aa21.26■□□□□ 0.99
CBX4-204ENST00000495122 MAP3K19Q56UN5 1328 aa21.26■□□□□ 0.99
CBX4-204ENST00000495122 IL2RBP14784 551 aa21.25■□□□□ 0.99
CBX4-204ENST00000495122 DUSP27Q5VZP5 1158 aa21.25■□□□□ 0.99
CBX4-204ENST00000495122 SALL2Q9Y467 1007 aaPredicted RBP21.25■□□□□ 0.99
CBX4-204ENST00000495122 NBPF14Q5TI25 921 aa21.24■□□□□ 0.99
CBX4-204ENST00000495122 CDCA7LQ96GN5 454 aa21.24■□□□□ 0.99
CBX4-204ENST00000495122 HOXC9P31274 260 aa21.23■□□□□ 0.99
CBX4-204ENST00000495122 CCDC146Q8IYE0 955 aa21.23■□□□□ 0.99
CBX4-204ENST00000495122 PKD1L3Q7Z443 1732 aa21.23■□□□□ 0.99
CBX4-204ENST00000495122 ITGB4P16144 1822 aa21.22■□□□□ 0.99
CBX4-204ENST00000495122 WDR63Q8IWG1 891 aa21.22■□□□□ 0.99
CBX4-204ENST00000495122 DIAPH1O60610 1272 aaKnown RBP21.21■□□□□ 0.99
CBX4-204ENST00000495122 FBLN1P23142 703 aa21.21■□□□□ 0.99
CBX4-204ENST00000495122 MEGF6O75095 1541 aa21.2■□□□□ 0.98
CBX4-204ENST00000495122 IRX6P78412 446 aaPredicted RBP21.2■□□□□ 0.98
CBX4-204ENST00000495122 LTV1Q96GA3 475 aaPredicted RBP21.2■□□□□ 0.98
CBX4-204ENST00000495122 U2AF1L5P0DN76 240 aaPredicted RBP21.19■□□□□ 0.98
CBX4-204ENST00000495122 U2AF1Q01081 240 aaKnown RBP eCLIP21.19■□□□□ 0.983e-8■□□□□ 10.9
CBX4-204ENST00000495122 WWC1Q8IX03 1113 aa21.19■□□□□ 0.98
CBX4-204ENST00000495122 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.19■□□□□ 0.98
CBX4-204ENST00000495122 ANO8Q9HCE9 1232 aaPredicted RBP21.19■□□□□ 0.98
CBX4-204ENST00000495122 KCNQ2O43526 872 aa21.18■□□□□ 0.98
CBX4-204ENST00000495122 AMPHP49418 695 aa21.18■□□□□ 0.98
CBX4-204ENST00000495122 PROM2Q8N271 834 aa21.18■□□□□ 0.98
CBX4-204ENST00000495122 TOGARAM1Q9Y4F4 1720 aa21.18■□□□□ 0.98
CBX4-204ENST00000495122 POLKQ9UBT6 870 aa21.17■□□□□ 0.98
CBX4-204ENST00000495122 COL24A1Q17RW2 1714 aa21.17■□□□□ 0.98
CBX4-204ENST00000495122 TAF1LQ8IZX4 1826 aa21.17■□□□□ 0.98
CBX4-204ENST00000495122 FCHSD2O94868 740 aa21.16■□□□□ 0.98
CBX4-204ENST00000495122 RRS1Q15050 365 aaKnown RBP21.16■□□□□ 0.98
CBX4-204ENST00000495122 KIF24Q5T7B8 1368 aa21.15■□□□□ 0.98
CBX4-204ENST00000495122 SENP3-EIF4A1A0A087X0R7 540 aa21.15■□□□□ 0.98
CBX4-204ENST00000495122 TXNRD1Q16881 649 aa21.15■□□□□ 0.98
CBX4-204ENST00000495122 ACSBG1Q96GR2 724 aa21.15■□□□□ 0.98
CBX4-204ENST00000495122 MAPK8IP3Q9UPT6 1336 aa21.14■□□□□ 0.97
CBX4-204ENST00000495122 PLEKHF1Q96S99 279 aa21.14■□□□□ 0.97
CBX4-204ENST00000495122 FLT4P35916 1363 aa21.13■□□□□ 0.97
CBX4-204ENST00000495122 IL16Q14005 1332 aa21.13■□□□□ 0.97
CBX4-204ENST00000495122 C5P01031 1676 aa21.12■□□□□ 0.97
CBX4-204ENST00000495122 NEFMP07197 916 aa21.11■□□□□ 0.97
CBX4-204ENST00000495122 CT47B1P0C2W7 299 aaPredicted RBP21.11■□□□□ 0.97
CBX4-204ENST00000495122 MYH16Q9H6N6 1097 aa21.11■□□□□ 0.97
CBX4-204ENST00000495122 U2SURPO15042 1029 aaKnown RBP21.1■□□□□ 0.97
CBX4-204ENST00000495122 NCAPD2Q15021 1401 aa21.1■□□□□ 0.97
CBX4-204ENST00000495122 NBPF6Q5VWK0 638 aa21.09■□□□□ 0.97
CBX4-204ENST00000495122 NBPF4Q96M43 638 aa21.09■□□□□ 0.97
CBX4-204ENST00000495122 SPON1Q9HCB6 807 aa21.09■□□□□ 0.97
CBX4-204ENST00000495122 DDX54Q8TDD1 881 aaKnown RBP21.08■□□□□ 0.97
CBX4-204ENST00000495122 TMPOP42166 694 aaKnown RBP21.07■□□□□ 0.96
CBX4-204ENST00000495122 HSP90AB2PQ58FF8 381 aa21.07■□□□□ 0.96
CBX4-204ENST00000495122 CCDC136Q96JN2 1154 aa21.07■□□□□ 0.96
CBX4-204ENST00000495122 PDGFDQ9GZP0 370 aaPredicted RBP21.07■□□□□ 0.96
CBX4-204ENST00000495122 STK32BQ9NY57 414 aa21.07■□□□□ 0.96
CBX4-204ENST00000495122 VIRMAQ69YN4 1812 aaKnown RBP21.06■□□□□ 0.96
CBX4-204ENST00000495122 IL13P35225 146 aa21.06■□□□□ 0.96
CBX4-204ENST00000495122 SLC15A2Q16348 729 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms