RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 TAF7LQ5H9L4 462 aa12.25□□□□□ -0.45
LINC00488-201ENST00000494582 CHMP4AQ9BY43 222 aa12.25□□□□□ -0.45
LINC00488-201ENST00000494582 PTCH1Q13635 1447 aa12.25□□□□□ -0.45
LINC00488-201ENST00000494582 ERICH4A6NGS2 130 aa12.25□□□□□ -0.45
LINC00488-201ENST00000494582 PTGS1P23219 599 aa12.25□□□□□ -0.45
LINC00488-201ENST00000494582 CCDC183Q5T5S1 534 aa12.25□□□□□ -0.45
LINC00488-201ENST00000494582 DCTPP1Q9H773 170 aa12.25□□□□□ -0.45
LINC00488-201ENST00000494582 CNPY2Q9Y2B0 182 aa12.25□□□□□ -0.45
LINC00488-201ENST00000494582 TRAPPC8Q9Y2L5 1435 aa12.24□□□□□ -0.45
LINC00488-201ENST00000494582 APBB1O00213 710 aa12.24□□□□□ -0.45
LINC00488-201ENST00000494582 ELL2O00472 640 aaPredicted RBP12.24□□□□□ -0.45
LINC00488-201ENST00000494582 GIMAP6Q6P9H5 292 aa12.24□□□□□ -0.45
LINC00488-201ENST00000494582 ABCC4O15439 1325 aa12.24□□□□□ -0.45
LINC00488-201ENST00000494582 TULP2O00295 520 aa12.24□□□□□ -0.45
LINC00488-201ENST00000494582 VAMP4O75379 141 aa12.24□□□□□ -0.45
LINC00488-201ENST00000494582 BRPF1P55201 1214 aaPredicted RBP12.24□□□□□ -0.45
LINC00488-201ENST00000494582 LRMPQ12912 555 aa12.24□□□□□ -0.45
LINC00488-201ENST00000494582 CERS3Q8IU89 383 aa12.24□□□□□ -0.45
LINC00488-201ENST00000494582 C16orf45Q96MC5 204 aaPredicted RBP12.24□□□□□ -0.45
LINC00488-201ENST00000494582 THUMPD2Q9BTF0 503 aaKnown RBP12.24□□□□□ -0.45
LINC00488-201ENST00000494582 COL3A1P02461 1466 aaPredicted RBP12.23□□□□□ -0.45
LINC00488-201ENST00000494582 UGGT1Q9NYU2 1555 aa12.23□□□□□ -0.45
LINC00488-201ENST00000494582 MYO3AQ8NEV4 1616 aa12.23□□□□□ -0.45
LINC00488-201ENST00000494582 USP32Q8NFA0 1604 aa12.23□□□□□ -0.45
LINC00488-201ENST00000494582 MAP3K4Q9Y6R4 1608 aa12.23□□□□□ -0.45
LINC00488-201ENST00000494582 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
LINC00488-201ENST00000494582 MX1P20591 662 aa12.23□□□□□ -0.45
LINC00488-201ENST00000494582 JPH4Q96JJ6 628 aa12.23□□□□□ -0.45
LINC00488-201ENST00000494582 TRERF1Q96PN7 1200 aa12.23□□□□□ -0.45
LINC00488-201ENST00000494582 SRCIN1Q9C0H9 1055 aa12.23□□□□□ -0.45
LINC00488-201ENST00000494582 ARHGAP5Q13017 1502 aa12.23□□□□□ -0.45
LINC00488-201ENST00000494582 TIGD1Q96MW7 591 aa12.22□□□□□ -0.45
LINC00488-201ENST00000494582 TRAK1Q9UPV9 953 aa12.22□□□□□ -0.45
LINC00488-201ENST00000494582 INO80Q9ULG1 1556 aaPredicted RBP12.22□□□□□ -0.45
LINC00488-201ENST00000494582 RPAP1Q9BWH6 1393 aaPredicted RBP12.22□□□□□ -0.45
LINC00488-201ENST00000494582 KMT5BQ4FZB7 885 aa12.22□□□□□ -0.45
LINC00488-201ENST00000494582 CARMIL2Q6F5E8 1435 aa12.22□□□□□ -0.45
LINC00488-201ENST00000494582 ERC2O15083 957 aa12.21□□□□□ -0.45
LINC00488-201ENST00000494582 SLC20A2Q08357 652 aa12.21□□□□□ -0.45
LINC00488-201ENST00000494582 SYCP1Q15431 976 aa12.21□□□□□ -0.45
LINC00488-201ENST00000494582 FAM53CQ9NYF3 392 aa12.21□□□□□ -0.45
LINC00488-201ENST00000494582 SMTNL1A8MU46 457 aa12.2□□□□□ -0.46
LINC00488-201ENST00000494582 DTNBO60941 627 aa12.2□□□□□ -0.46
LINC00488-201ENST00000494582 REC8O95072 547 aa12.2□□□□□ -0.46
LINC00488-201ENST00000494582 TMEM87AQ8NBN3 555 aa12.2□□□□□ -0.46
LINC00488-201ENST00000494582 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC00488-201ENST00000494582 NRBP1Q9UHY1 535 aa12.2□□□□□ -0.46
LINC00488-201ENST00000494582 V9GYY5 206 aaPredicted RBP12.2□□□□□ -0.46
LINC00488-201ENST00000494582 ARHGAP45Q92619 1136 aa12.2□□□□□ -0.46
LINC00488-201ENST00000494582 CCDC66A2RUB6 948 aa12.19□□□□□ -0.46
LINC00488-201ENST00000494582 RBM6P78332 1123 aaKnown RBP12.19□□□□□ -0.46
LINC00488-201ENST00000494582 DNAJC2Q99543 621 aaKnown RBP12.19□□□□□ -0.46
LINC00488-201ENST00000494582 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
LINC00488-201ENST00000494582 ATP10DQ9P241 1426 aa12.19□□□□□ -0.46
LINC00488-201ENST00000494582 ZC3H13Q5T200 1668 aaKnown RBP12.19□□□□□ -0.46
LINC00488-201ENST00000494582 TRIM6-TRIM34B2RNG4 842 aa12.19□□□□□ -0.46
LINC00488-201ENST00000494582 TSHZ3Q63HK5 1081 aa12.19□□□□□ -0.46
LINC00488-201ENST00000494582 KRT222Q8N1A0 295 aa12.19□□□□□ -0.46
LINC00488-201ENST00000494582 ZBTB9Q96C00 473 aa12.19□□□□□ -0.46
LINC00488-201ENST00000494582 INTS4Q96HW7 963 aaKnown RBP12.19□□□□□ -0.46
LINC00488-201ENST00000494582 TRIM34Q9BYJ4 488 aa12.19□□□□□ -0.46
LINC00488-201ENST00000494582 RTL1A6NKG5 1358 aa12.19□□□□□ -0.46
LINC00488-201ENST00000494582 TNNT1P13805 278 aa12.18□□□□□ -0.46
LINC00488-201ENST00000494582 KRT24Q2M2I5 525 aa12.18□□□□□ -0.46
LINC00488-201ENST00000494582 CCDC186Q7Z3E2 898 aa12.18□□□□□ -0.46
LINC00488-201ENST00000494582 ERBB3P21860 1342 aa12.18□□□□□ -0.46
LINC00488-201ENST00000494582 YEATS2Q9ULM3 1422 aa12.18□□□□□ -0.46
LINC00488-201ENST00000494582 GGNBP2Q9H3C7 697 aa12.18□□□□□ -0.46
LINC00488-201ENST00000494582 MYOM2P54296 1465 aa12.18□□□□□ -0.46
LINC00488-201ENST00000494582 QRICH2Q9H0J4 1663 aa12.18□□□□□ -0.46
LINC00488-201ENST00000494582 CASC1Q6TDU7 716 aa12.17□□□□□ -0.46
LINC00488-201ENST00000494582 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
LINC00488-201ENST00000494582 ZNF446Q9NWS9 450 aa12.17□□□□□ -0.46
LINC00488-201ENST00000494582 TMEM132EQ6IEE7 984 aa12.17□□□□□ -0.46
LINC00488-201ENST00000494582 FBXO38Q6PIJ6 1188 aa12.17□□□□□ -0.46
LINC00488-201ENST00000494582 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
LINC00488-201ENST00000494582 FIBPO43427 364 aa12.16□□□□□ -0.46
LINC00488-201ENST00000494582 UBE2HP62256 183 aa12.16□□□□□ -0.46
LINC00488-201ENST00000494582 ANKRD44Q8N8A2 993 aa12.16□□□□□ -0.46
LINC00488-201ENST00000494582 IFT57Q9NWB7 429 aa12.16□□□□□ -0.46
LINC00488-201ENST00000494582 ARHGEF40Q8TER5 1519 aa12.16□□□□□ -0.46
LINC00488-201ENST00000494582 FBLN2P98095 1184 aa12.16□□□□□ -0.46
LINC00488-201ENST00000494582 CCDC112Q8NEF3 446 aa12.16□□□□□ -0.46
LINC00488-201ENST00000494582 ZNF215Q9UL58 517 aaPredicted RBP12.16□□□□□ -0.46
LINC00488-201ENST00000494582 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC00488-201ENST00000494582 TPM3P06753 285 aa12.15□□□□□ -0.46
LINC00488-201ENST00000494582 HNRNPH2P55795 449 aaKnown RBP12.15□□□□□ -0.46
LINC00488-201ENST00000494582 CEP85Q6P2H3 762 aa12.15□□□□□ -0.46
LINC00488-201ENST00000494582 LUZP1Q86V48 1076 aa12.15□□□□□ -0.46
LINC00488-201ENST00000494582 C8orf58Q8NAV2 365 aa12.15□□□□□ -0.46
LINC00488-201ENST00000494582 LARP6Q9BRS8 491 aaKnown RBP12.15□□□□□ -0.46
LINC00488-201ENST00000494582 FEZ2Q9UHY8 353 aaPredicted RBP12.15□□□□□ -0.46
LINC00488-201ENST00000494582 USP27XA6NNY8 438 aa12.15□□□□□ -0.46
LINC00488-201ENST00000494582 MCM2P49736 904 aa12.15□□□□□ -0.46
LINC00488-201ENST00000494582 ZSCAN25Q6NSZ9 544 aa12.15□□□□□ -0.46
LINC00488-201ENST00000494582 ZNF397Q8NF99 534 aaPredicted RBP12.15□□□□□ -0.46
LINC00488-201ENST00000494582 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
LINC00488-201ENST00000494582 PHACTR3Q96KR7 559 aa12.15□□□□□ -0.46
LINC00488-201ENST00000494582 MBIPQ9NS73 344 aa12.15□□□□□ -0.46
LINC00488-201ENST00000494582 CALCOCO1Q9P1Z2 691 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms