RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ARMC2Q8NEN0 867 aa6.22□□□□□ -1.41
PTPN12-212ENST00000494248 RHOQP17081 205 aa6.21□□□□□ -1.42
PTPN12-212ENST00000494248 TTLL12Q14166 644 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-212ENST00000494248 PRPF38BQ5VTL8 546 aaKnown RBP6.21□□□□□ -1.42
PTPN12-212ENST00000494248 RIC3Q7Z5B4 369 aa6.21□□□□□ -1.42
PTPN12-212ENST00000494248 TSC1Q92574 1164 aa6.21□□□□□ -1.42
PTPN12-212ENST00000494248 TMPRSS4Q9NRS4 437 aa6.21□□□□□ -1.42
PTPN12-212ENST00000494248 AMHR2Q16671 573 aa6.2□□□□□ -1.42
PTPN12-212ENST00000494248 TRIM22Q8IYM9 498 aa6.2□□□□□ -1.42
PTPN12-212ENST00000494248 OCSTAMPQ9BR26 566 aa6.2□□□□□ -1.42
PTPN12-212ENST00000494248 LIMD1Q9UGP4 676 aa6.2□□□□□ -1.42
PTPN12-212ENST00000494248 LILRA1O75019 489 aa6.19□□□□□ -1.42
PTPN12-212ENST00000494248 LRP8Q14114 963 aa6.19□□□□□ -1.42
PTPN12-212ENST00000494248 LCE4AQ5TA78 99 aa6.19□□□□□ -1.42
PTPN12-212ENST00000494248 C1orf229Q6ZS94 237 aaPredicted RBP6.19□□□□□ -1.42
PTPN12-212ENST00000494248 LYSMD3Q7Z3D4 306 aa6.19□□□□□ -1.42
PTPN12-212ENST00000494248 SHISA8B8ZZ34 492 aa6.18□□□□□ -1.42
PTPN12-212ENST00000494248 OIP5O43482 229 aa6.18□□□□□ -1.42
PTPN12-212ENST00000494248 CHRNA4P43681 627 aa6.18□□□□□ -1.42
PTPN12-212ENST00000494248 PRICKLE2Q7Z3G6 844 aa6.18□□□□□ -1.42
PTPN12-212ENST00000494248 ZNF784Q8NCA9 323 aaPredicted RBP6.18□□□□□ -1.42
PTPN12-212ENST00000494248 GTPBP3Q969Y2 492 aaKnown RBP6.18□□□□□ -1.42
PTPN12-212ENST00000494248 ADH1AP07327 375 aa6.17□□□□□ -1.42
PTPN12-212ENST00000494248 PTGIRP43119 386 aa6.17□□□□□ -1.42
PTPN12-212ENST00000494248 RTL5Q5HYW3 569 aaPredicted RBP6.17□□□□□ -1.42
PTPN12-212ENST00000494248 MKL2Q9ULH7 1088 aa6.17□□□□□ -1.42
PTPN12-212ENST00000494248 LILRB3O75022 631 aa6.16□□□□□ -1.42
PTPN12-212ENST00000494248 HOXB4P17483 251 aaPredicted RBP6.16□□□□□ -1.42
PTPN12-212ENST00000494248 DHX9Q08211 1270 aaKnown RBP6.16□□□□□ -1.42
PTPN12-212ENST00000494248 RSPO4Q2I0M5 234 aaPredicted RBP6.16□□□□□ -1.42
PTPN12-212ENST00000494248 SUV39H2Q9H5I1 410 aa6.16□□□□□ -1.42
PTPN12-212ENST00000494248 LRRC4BQ9NT99 713 aa6.16□□□□□ -1.42
PTPN12-212ENST00000494248 GPKOWQ92917 476 aaPredicted RBP eCLIP6.15□□□□□ -1.42
PTPN12-212ENST00000494248 SLC10A4Q96EP9 437 aa6.15□□□□□ -1.42
PTPN12-212ENST00000494248 ARHGAP9Q9BRR9 750 aa6.15□□□□□ -1.42
PTPN12-212ENST00000494248 COL17A1Q9UMD9 1497 aaPredicted RBP6.15□□□□□ -1.43
PTPN12-212ENST00000494248 RNF144AP50876 292 aaPredicted RBP6.14□□□□□ -1.43
PTPN12-212ENST00000494248 GRIN2CQ14957 1233 aa6.14□□□□□ -1.43
PTPN12-212ENST00000494248 DIXDC1Q155Q3 683 aa6.14□□□□□ -1.43
PTPN12-212ENST00000494248 PDXDC2PQ6P474 469 aa6.14□□□□□ -1.43
PTPN12-212ENST00000494248 RIPOR1Q6ZS17 1223 aa6.14□□□□□ -1.43
PTPN12-212ENST00000494248 PARP9Q8IXQ6 854 aa6.14□□□□□ -1.43
PTPN12-212ENST00000494248 GMCL1Q96IK5 515 aa6.14□□□□□ -1.43
PTPN12-212ENST00000494248 NUTM2BA6NNL0 878 aaPredicted RBP6.13□□□□□ -1.43
PTPN12-212ENST00000494248 NUTM2EB1AL46 878 aaPredicted RBP6.13□□□□□ -1.43
PTPN12-212ENST00000494248 THBS1P07996 1170 aa6.13□□□□□ -1.43
PTPN12-212ENST00000494248 MX2P20592 715 aa6.13□□□□□ -1.43
PTPN12-212ENST00000494248 NUTM2DQ5VT03 806 aaPredicted RBP6.13□□□□□ -1.43
PTPN12-212ENST00000494248 NUTM2AQ8IVF1 878 aaPredicted RBP6.13□□□□□ -1.43
PTPN12-212ENST00000494248 KDM2AQ9Y2K7 1162 aa6.13□□□□□ -1.43
PTPN12-212ENST00000494248 ERVH48-1M5A8F1 160 aa6.12□□□□□ -1.43
PTPN12-212ENST00000494248 HYAL3O43820 417 aaPredicted RBP6.12□□□□□ -1.43
PTPN12-212ENST00000494248 RAB15P59190 212 aa6.12□□□□□ -1.43
PTPN12-212ENST00000494248 CTDSPL2Q05D32 466 aa6.12□□□□□ -1.43
PTPN12-212ENST00000494248 NKAPLQ5M9Q1 402 aa6.12□□□□□ -1.43
PTPN12-212ENST00000494248 MYSM1Q5VVJ2 828 aa6.12□□□□□ -1.43
PTPN12-212ENST00000494248 LINC00114Q6XXX2 140 aa6.12□□□□□ -1.43
PTPN12-212ENST00000494248 CDV3Q9UKY7 258 aaKnown RBP6.12□□□□□ -1.43
PTPN12-212ENST00000494248 FOXR1Q6PIV2 292 aa6.11□□□□□ -1.43
PTPN12-212ENST00000494248 BARGINQ6ZT62 677 aa6.11□□□□□ -1.43
PTPN12-212ENST00000494248 OXCT2Q9BYC2 517 aaPredicted RBP6.11□□□□□ -1.43
PTPN12-212ENST00000494248 ZBTB33Q86T24 672 aa6.1□□□□□ -1.43
PTPN12-212ENST00000494248 CCER1Q8TC90 406 aaPredicted RBP6.1□□□□□ -1.43
PTPN12-212ENST00000494248 LRRN4Q8WUT4 740 aa6.1□□□□□ -1.43
PTPN12-212ENST00000494248 GAS2L1Q99501 681 aaPredicted RBP6.1□□□□□ -1.43
PTPN12-212ENST00000494248 FKBPLQ9UIM3 349 aa6.1□□□□□ -1.43
PTPN12-212ENST00000494248 DYRK1BQ9Y463 629 aa6.1□□□□□ -1.43
PTPN12-212ENST00000494248 POU4F2Q12837 409 aa6.09□□□□□ -1.43
PTPN12-212ENST00000494248 TUSC1Q2TAM9 212 aa6.09□□□□□ -1.43
PTPN12-212ENST00000494248 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.09□□□□□ -1.43
PTPN12-212ENST00000494248 HELBQ8NG08 1087 aaPredicted RBP6.09□□□□□ -1.43
PTPN12-212ENST00000494248 ADAM32Q8TC27 787 aa6.09□□□□□ -1.43
PTPN12-212ENST00000494248 DYRK3O43781 588 aa6.08□□□□□ -1.44
PTPN12-212ENST00000494248 JAG1P78504 1218 aa6.08□□□□□ -1.44
PTPN12-212ENST00000494248 KLRG1Q96E93 195 aa6.08□□□□□ -1.44
PTPN12-212ENST00000494248 RRAGCQ9HB90 399 aa6.08□□□□□ -1.44
PTPN12-212ENST00000494248 CYLDQ9NQC7 956 aa6.08□□□□□ -1.44
PTPN12-212ENST00000494248 TULP1O00294 542 aaPredicted RBP6.07□□□□□ -1.44
PTPN12-212ENST00000494248 ZMYND10O75800 440 aa6.07□□□□□ -1.44
PTPN12-212ENST00000494248 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
PTPN12-212ENST00000494248 FBXO31Q5XUX0 539 aaPredicted RBP6.07□□□□□ -1.44
PTPN12-212ENST00000494248 EDARADDQ8WWZ3 215 aa6.07□□□□□ -1.44
PTPN12-212ENST00000494248 TRERF1Q96PN7 1200 aa6.07□□□□□ -1.44
PTPN12-212ENST00000494248 ESPNB1AK53 854 aa6.06□□□□□ -1.44
PTPN12-212ENST00000494248 H7C1W4 665 aa6.06□□□□□ -1.44
PTPN12-212ENST00000494248 NR6A1Q15406 480 aa6.06□□□□□ -1.44
PTPN12-212ENST00000494248 PRSS36Q5K4E3 855 aa6.06□□□□□ -1.44
PTPN12-212ENST00000494248 MAP2K3P46734 347 aa6.05□□□□□ -1.44
PTPN12-212ENST00000494248 UBAP2LQ14157 1087 aaKnown RBP6.05□□□□□ -1.44
PTPN12-212ENST00000494248 NUCKS1Q9H1E3 243 aaKnown RBP6.05□□□□□ -1.44
PTPN12-212ENST00000494248 NSFL1CQ9UNZ2 370 aaKnown RBP6.05□□□□□ -1.44
PTPN12-212ENST00000494248 A0A1W2PRU2 124 aa6.04□□□□□ -1.44
PTPN12-212ENST00000494248 MEN1O00255 615 aa6.04□□□□□ -1.44
PTPN12-212ENST00000494248 C2CD2LO14523 706 aa6.04□□□□□ -1.44
PTPN12-212ENST00000494248 GATA4P43694 442 aa6.04□□□□□ -1.44
PTPN12-212ENST00000494248 PLCB2Q00722 1185 aa6.04□□□□□ -1.44
PTPN12-212ENST00000494248 NBPF10Q6P3W6 841 aaKnown RBP6.04□□□□□ -1.44
PTPN12-212ENST00000494248 NBPF15Q8N660 670 aa6.04□□□□□ -1.44
PTPN12-212ENST00000494248 GRIP2Q9C0E4 1043 aa6.04□□□□□ -1.44
PTPN12-212ENST00000494248 TRIM66O15016 1216 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms