RNA–Protein interactions for RNA: ENST00000494245.1

STX1A-212, Transcript of syntaxin 1A, humanhuman

TSL 4

Gene STX1A, Length 565 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-212ENST00000494245 FAM98CQ17RN3 349 aaKnown RBP28.38■■■□□ 2.13
STX1A-212ENST00000494245 POTEAQ6S8J7 498 aa28.38■■■□□ 2.13
STX1A-212ENST00000494245 LRRC37A3O60309 1634 aa28.38■■■□□ 2.13
STX1A-212ENST00000494245 ADAMTS8Q9UP79 889 aa28.37■■■□□ 2.13
STX1A-212ENST00000494245 ONECUT3O60422 494 aaPredicted RBP28.36■■■□□ 2.13
STX1A-212ENST00000494245 NEFMP07197 916 aa28.36■■■□□ 2.13
STX1A-212ENST00000494245 PRKAR2BP31323 418 aa28.35■■■□□ 2.13
STX1A-212ENST00000494245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.34■■■□□ 2.13
STX1A-212ENST00000494245 SHANK3Q9BYB0 1731 aa28.34■■■□□ 2.13
STX1A-212ENST00000494245 TNS2Q63HR2 1409 aa28.34■■■□□ 2.13
STX1A-212ENST00000494245 A0A0G2JS52 829 aa28.32■■■□□ 2.12
STX1A-212ENST00000494245 MYT1Q01538 1121 aa28.32■■■□□ 2.12
STX1A-212ENST00000494245 AMOTQ4VCS5 1084 aa28.32■■■□□ 2.12
STX1A-212ENST00000494245 PLEKHO1Q53GL0 409 aaPredicted RBP28.32■■■□□ 2.12
STX1A-212ENST00000494245 FAM9BQ8IZU0 186 aa28.32■■■□□ 2.12
STX1A-212ENST00000494245 SPG7Q9UQ90 795 aa28.31■■■□□ 2.12
STX1A-212ENST00000494245 MAPK8IP3Q9UPT6 1336 aa28.31■■■□□ 2.12
STX1A-212ENST00000494245 BRWD3Q6RI45 1802 aa28.3■■■□□ 2.12
STX1A-212ENST00000494245 EXOC5O00471 708 aa28.3■■■□□ 2.12
STX1A-212ENST00000494245 DDB1Q16531 1140 aa28.3■■■□□ 2.12
STX1A-212ENST00000494245 ZCRB1Q8TBF4 217 aaKnown RBP28.3■■■□□ 2.12
STX1A-212ENST00000494245 PLEKHF1Q96S99 279 aa28.3■■■□□ 2.12
STX1A-212ENST00000494245 RUNDC1Q96C34 613 aa28.29■■■□□ 2.12
STX1A-212ENST00000494245 SEPT12Q8IYM1 358 aa28.28■■■□□ 2.12
STX1A-212ENST00000494245 PCDH11XQ9BZA7 1347 aa28.27■■■□□ 2.12
STX1A-212ENST00000494245 PCDH11YQ9BZA8 1340 aa28.27■■■□□ 2.12
STX1A-212ENST00000494245 RGS12O14924 1447 aa28.26■■■□□ 2.12
STX1A-212ENST00000494245 GAS2L2Q8NHY3 880 aa28.26■■■□□ 2.11
STX1A-212ENST00000494245 DLG5Q8TDM6 1919 aa28.25■■■□□ 2.11
STX1A-212ENST00000494245 CCDC146Q8IYE0 955 aa28.24■■■□□ 2.11
STX1A-212ENST00000494245 PDE3BQ13370 1112 aa28.23■■■□□ 2.11
STX1A-212ENST00000494245 PHACTR3Q96KR7 559 aa28.23■■■□□ 2.11
STX1A-212ENST00000494245 ZNF530Q6P9A1 599 aaPredicted RBP28.22■■■□□ 2.11
STX1A-212ENST00000494245 VIRMAQ69YN4 1812 aaKnown RBP28.22■■■□□ 2.11
STX1A-212ENST00000494245 MTHFSDQ2M296 383 aaKnown RBP28.21■■■□□ 2.11
STX1A-212ENST00000494245 C1orf141Q5JVX7 400 aa28.2■■■□□ 2.1
STX1A-212ENST00000494245 IFNL2Q8IZJ0 200 aa28.2■■■□□ 2.1
STX1A-212ENST00000494245 NFE2L2Q16236 605 aa28.19■■■□□ 2.1
STX1A-212ENST00000494245 AKAP4Q5JQC9 854 aa28.19■■■□□ 2.1
STX1A-212ENST00000494245 DDX54Q8TDD1 881 aaKnown RBP28.18■■■□□ 2.1
STX1A-212ENST00000494245 CYP27B1O15528 508 aa28.17■■■□□ 2.1
STX1A-212ENST00000494245 HSP90AB1P08238 724 aaKnown RBP28.17■■■□□ 2.1
STX1A-212ENST00000494245 PHKG2P15735 406 aa28.17■■■□□ 2.1
STX1A-212ENST00000494245 KRT27Q7Z3Y8 459 aa28.17■■■□□ 2.1
STX1A-212ENST00000494245 MAP3K5Q99683 1374 aa28.16■■■□□ 2.1
STX1A-212ENST00000494245 SCN11AQ9UI33 1791 aa28.16■■■□□ 2.1
STX1A-212ENST00000494245 TMPOP42166 694 aaKnown RBP28.15■■■□□ 2.1
STX1A-212ENST00000494245 ADAMTS7Q9UKP4 1686 aa28.14■■■□□ 2.1
STX1A-212ENST00000494245 APAF1O14727 1248 aa28.14■■■□□ 2.1
STX1A-212ENST00000494245 MARCH10Q8NA82 808 aaPredicted RBP28.14■■■□□ 2.1
STX1A-212ENST00000494245 GNAT3A8MTJ3 354 aa28.13■■■□□ 2.09
STX1A-212ENST00000494245 LMOD3Q0VAK6 560 aa28.13■■■□□ 2.09
STX1A-212ENST00000494245 NKX1-1Q15270 411 aaPredicted RBP28.13■■■□□ 2.09
STX1A-212ENST00000494245 BCL9O00512 1426 aa28.12■■■□□ 2.09
STX1A-212ENST00000494245 HTATSF1O43719 755 aaKnown RBP28.12■■■□□ 2.09
STX1A-212ENST00000494245 NCBP3Q53F19 620 aaKnown RBP28.12■■■□□ 2.09
STX1A-212ENST00000494245 NGEFQ8N5V2 710 aa28.12■■■□□ 2.09
STX1A-212ENST00000494245 DOT1LQ8TEK3 1739 aa28.12■■■□□ 2.09
STX1A-212ENST00000494245 RIPK4P57078 832 aa28.1■■■□□ 2.09
STX1A-212ENST00000494245 RTF1Q92541 710 aaKnown RBP28.1■■■□□ 2.09
STX1A-212ENST00000494245 DCAF5Q96JK2 942 aa28.1■■■□□ 2.09
STX1A-212ENST00000494245 SBF2Q86WG5 1849 aa28.1■■■□□ 2.09
STX1A-212ENST00000494245 TOGARAM1Q9Y4F4 1720 aa28.09■■■□□ 2.09
STX1A-212ENST00000494245 KAT6BQ8WYB5 2073 aa28.07■■■□□ 2.08
STX1A-212ENST00000494245 ITGB4P16144 1822 aa28.07■■■□□ 2.08
STX1A-212ENST00000494245 RRP7AQ9Y3A4 280 aaKnown RBP28.07■■■□□ 2.08
STX1A-212ENST00000494245 KDM6AO15550 1401 aaPredicted RBP28.07■■■□□ 2.08
STX1A-212ENST00000494245 NEUROD2Q15784 382 aa28.06■■■□□ 2.08
STX1A-212ENST00000494245 FAM196AQ6ZSG2 479 aa28.06■■■□□ 2.08
STX1A-212ENST00000494245 NHSQ6T4R5 1651 aa28.06■■■□□ 2.08
STX1A-212ENST00000494245 RNMTO43148 476 aaKnown RBP28.04■■■□□ 2.08
STX1A-212ENST00000494245 CCDC27Q2M243 656 aa28.04■■■□□ 2.08
STX1A-212ENST00000494245 MPRIPQ6WCQ1 1025 aa28.04■■■□□ 2.08
STX1A-212ENST00000494245 MRC1P22897 1456 aa28.03■■■□□ 2.08
STX1A-212ENST00000494245 CEMIPQ8WUJ3 1361 aa28.03■■■□□ 2.08
STX1A-212ENST00000494245 SIPA1L3O60292 1781 aaPredicted RBP28.03■■■□□ 2.08
STX1A-212ENST00000494245 ERVV-2B6SEH9 535 aa28.02■■■□□ 2.08
STX1A-212ENST00000494245 FAM182BQ5T319 152 aa28.01■■■□□ 2.07
STX1A-212ENST00000494245 IL17REQ8NFR9 667 aa28■■■□□ 2.07
STX1A-212ENST00000494245 TRIM35Q9UPQ4 493 aa28■■■□□ 2.07
STX1A-212ENST00000494245 MCM10Q7L590 875 aa27.99■■■□□ 2.07
STX1A-212ENST00000494245 LGR6Q9HBX8 967 aa27.99■■■□□ 2.07
STX1A-212ENST00000494245 TEFQ10587 303 aa27.98■■■□□ 2.07
STX1A-212ENST00000494245 CALD1Q05682 793 aaKnown RBP27.97■■■□□ 2.07
STX1A-212ENST00000494245 DCTN1Q14203 1278 aa27.97■■■□□ 2.07
STX1A-212ENST00000494245 CABP4P57796 275 aa27.96■■■□□ 2.07
STX1A-212ENST00000494245 HNRNPUQ00839 825 aaKnown RBP eCLIP27.96■■■□□ 2.07
STX1A-212ENST00000494245 SLC52A2Q9HAB3 445 aa27.96■■■□□ 2.07
STX1A-212ENST00000494245 BTAF1O14981 1849 aa27.95■■■□□ 2.07
STX1A-212ENST00000494245 WWC1Q8IX03 1113 aa27.95■■■□□ 2.06
STX1A-212ENST00000494245 ACSBG1Q96GR2 724 aa27.95■■■□□ 2.06
STX1A-212ENST00000494245 TMOD3Q9NYL9 352 aa27.95■■■□□ 2.06
STX1A-212ENST00000494245 SALL2Q9Y467 1007 aaPredicted RBP27.94■■■□□ 2.06
STX1A-212ENST00000494245 SENP3-EIF4A1A0A087X0R7 540 aa27.93■■■□□ 2.06
STX1A-212ENST00000494245 PRIM1P49642 420 aaKnown RBP27.93■■■□□ 2.06
STX1A-212ENST00000494245 SYTL4Q96C24 671 aaPredicted RBP27.93■■■□□ 2.06
STX1A-212ENST00000494245 TNS1Q9HBL0 1735 aaKnown RBP27.92■■■□□ 2.06
STX1A-212ENST00000494245 PAPPAQ13219 1627 aa27.92■■■□□ 2.06
STX1A-212ENST00000494245 WDR63Q8IWG1 891 aa27.91■■■□□ 2.06
STX1A-212ENST00000494245 THUMPD2Q9BTF0 503 aaKnown RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms