RNA–Protein interactions for RNA: ENST00000494227.3

RN7SL538P-201, Transcript of RNA, 7SL, cytoplasmic 538, pseudogene, humanhuman

BASIC

Gene RN7SL538P, Length 304 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL538P-201ENST00000494227 ABTB2Q8N961 1025 aa12□□□□□ -0.49
RN7SL538P-201ENST00000494227 OVOS2A0A0J9YW53 1432 aa12□□□□□ -0.49
RN7SL538P-201ENST00000494227 OVOS2Q6IE36 1432 aa12□□□□□ -0.49
RN7SL538P-201ENST00000494227 MON2Q7Z3U7 1717 aa12□□□□□ -0.49
RN7SL538P-201ENST00000494227 SOX12O15370 315 aa11.99□□□□□ -0.49
RN7SL538P-201ENST00000494227 WDR43Q15061 677 aaKnown RBP eCLIP11.99□□□□□ -0.49
RN7SL538P-201ENST00000494227 CFAP53Q96M91 514 aa11.99□□□□□ -0.49
RN7SL538P-201ENST00000494227 RBM42Q9BTD8 480 aaKnown RBP11.99□□□□□ -0.49
RN7SL538P-201ENST00000494227 AATKQ6ZMQ8 1374 aa11.99□□□□□ -0.49
RN7SL538P-201ENST00000494227 COL18A1P39060 1754 aa11.99□□□□□ -0.49
RN7SL538P-201ENST00000494227 RGPD5Q99666 1765 aa11.98□□□□□ -0.49
RN7SL538P-201ENST00000494227 INSRP06213 1382 aa11.98□□□□□ -0.49
RN7SL538P-201ENST00000494227 USP19O94966 1318 aa11.98□□□□□ -0.49
RN7SL538P-201ENST00000494227 PPM1GO15355 546 aaPredicted RBP11.98□□□□□ -0.49
RN7SL538P-201ENST00000494227 SLIT3O75094 1523 aa11.97□□□□□ -0.49
RN7SL538P-201ENST00000494227 OVOS2A0A0G2JMS6 1433 aa11.97□□□□□ -0.49
RN7SL538P-201ENST00000494227 CPDO75976 1380 aa11.97□□□□□ -0.49
RN7SL538P-201ENST00000494227 BARGINQ6ZT62 677 aa11.97□□□□□ -0.49
RN7SL538P-201ENST00000494227 CCDC146Q8IYE0 955 aa11.97□□□□□ -0.49
RN7SL538P-201ENST00000494227 PAPPAQ13219 1627 aa11.97□□□□□ -0.49
RN7SL538P-201ENST00000494227 COL3A1P02461 1466 aaPredicted RBP11.96□□□□□ -0.49
RN7SL538P-201ENST00000494227 DIAPH1O60610 1272 aaKnown RBP11.96□□□□□ -0.49
RN7SL538P-201ENST00000494227 SALL2Q9Y467 1007 aaPredicted RBP11.96□□□□□ -0.49
RN7SL538P-201ENST00000494227 MAP3K19Q56UN5 1328 aa11.95□□□□□ -0.5
RN7SL538P-201ENST00000494227 IL13P35225 146 aa11.95□□□□□ -0.5
RN7SL538P-201ENST00000494227 TCP11L2Q8N4U5 519 aa11.95□□□□□ -0.5
RN7SL538P-201ENST00000494227 ZBED9Q6R2W3 1325 aa11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 U2SURPO15042 1029 aaKnown RBP11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 KCNQ2O43526 872 aa11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 U2AF1L5P0DN76 240 aaPredicted RBP11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 U2AF1Q01081 240 aaKnown RBP eCLIP11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 PDE3BQ13370 1112 aa11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 HSP90AB2PQ58FF8 381 aa11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 SPON1Q9HCB6 807 aa11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 PPP1R1BQ9UD71 204 aaPredicted RBP11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 CRB1P82279 1406 aa11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 CHD4Q14839 1912 aa11.94□□□□□ -0.5
RN7SL538P-201ENST00000494227 KIF20BQ96Q89 1820 aa11.93□□□□□ -0.5
RN7SL538P-201ENST00000494227 APAF1O14727 1248 aa11.93□□□□□ -0.5
RN7SL538P-201ENST00000494227 NHSQ6T4R5 1651 aa11.93□□□□□ -0.5
RN7SL538P-201ENST00000494227 ANKRD26Q9UPS8 1709 aa11.92□□□□□ -0.5
RN7SL538P-201ENST00000494227 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
RN7SL538P-201ENST00000494227 EIF4A2Q14240 407 aaKnown RBP11.92□□□□□ -0.5
RN7SL538P-201ENST00000494227 NUDCQ9Y266 331 aa11.92□□□□□ -0.5
RN7SL538P-201ENST00000494227 TUBGCP6Q96RT7 1819 aa11.91□□□□□ -0.5
RN7SL538P-201ENST00000494227 GCP02774 474 aa11.91□□□□□ -0.5
RN7SL538P-201ENST00000494227 PTGER2P43116 358 aa11.91□□□□□ -0.5
RN7SL538P-201ENST00000494227 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
RN7SL538P-201ENST00000494227 PLEKHF1Q96S99 279 aa11.91□□□□□ -0.5
RN7SL538P-201ENST00000494227 ZBTB7CA1YPR0 619 aa11.9□□□□□ -0.5
RN7SL538P-201ENST00000494227 AMPHP49418 695 aa11.9□□□□□ -0.5
RN7SL538P-201ENST00000494227 EVA1CP58658 441 aa11.9□□□□□ -0.5
RN7SL538P-201ENST00000494227 NBPF14Q5TI25 921 aa11.9□□□□□ -0.5
RN7SL538P-201ENST00000494227 ZNF784Q8NCA9 323 aaPredicted RBP11.9□□□□□ -0.5
RN7SL538P-201ENST00000494227 NFAT5O94916 1531 aa11.9□□□□□ -0.5
RN7SL538P-201ENST00000494227 BTAF1O14981 1849 aa11.89□□□□□ -0.51
RN7SL538P-201ENST00000494227 HMOX1P09601 288 aa11.89□□□□□ -0.51
RN7SL538P-201ENST00000494227 HOXC9P31274 260 aa11.89□□□□□ -0.51
RN7SL538P-201ENST00000494227 MKRN4PQ13434 485 aaPredicted RBP11.89□□□□□ -0.51
RN7SL538P-201ENST00000494227 ARHGEF25Q86VW2 580 aa11.89□□□□□ -0.51
RN7SL538P-201ENST00000494227 PROM2Q8N271 834 aa11.89□□□□□ -0.51
RN7SL538P-201ENST00000494227 CDCA7LQ96GN5 454 aa11.89□□□□□ -0.51
RN7SL538P-201ENST00000494227 RRP7AQ9Y3A4 280 aaKnown RBP11.89□□□□□ -0.51
RN7SL538P-201ENST00000494227 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
RN7SL538P-201ENST00000494227 KCNH5Q8NCM2 988 aa11.88□□□□□ -0.51
RN7SL538P-201ENST00000494227 IP6K1Q92551 441 aa11.88□□□□□ -0.51
RN7SL538P-201ENST00000494227 RSPH6AQ9H0K4 717 aa11.88□□□□□ -0.51
RN7SL538P-201ENST00000494227 ZNF521Q96K83 1311 aa11.87□□□□□ -0.51
RN7SL538P-201ENST00000494227 SHANK3Q9BYB0 1731 aa11.87□□□□□ -0.51
RN7SL538P-201ENST00000494227 FCHSD2O94868 740 aa11.87□□□□□ -0.51
RN7SL538P-201ENST00000494227 MARCH10Q8NA82 808 aaPredicted RBP11.87□□□□□ -0.51
RN7SL538P-201ENST00000494227 PHACTR3Q96KR7 559 aa11.87□□□□□ -0.51
RN7SL538P-201ENST00000494227 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
RN7SL538P-201ENST00000494227 ABCC6O95255 1503 aa11.86□□□□□ -0.51
RN7SL538P-201ENST00000494227 PRKAR2BP31323 418 aa11.86□□□□□ -0.51
RN7SL538P-201ENST00000494227 LTV1Q96GA3 475 aaPredicted RBP11.86□□□□□ -0.51
RN7SL538P-201ENST00000494227 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
RN7SL538P-201ENST00000494227 THRAP3Q9Y2W1 955 aaKnown RBP11.86□□□□□ -0.51
RN7SL538P-201ENST00000494227 FLT4P35916 1363 aa11.86□□□□□ -0.51
RN7SL538P-201ENST00000494227 LTN1O94822 1766 aa11.85□□□□□ -0.51
RN7SL538P-201ENST00000494227 NEUROD2Q15784 382 aa11.85□□□□□ -0.51
RN7SL538P-201ENST00000494227 EYA1Q99502 592 aa11.85□□□□□ -0.51
RN7SL538P-201ENST00000494227 SGIP1Q9BQI5 828 aa11.85□□□□□ -0.51
RN7SL538P-201ENST00000494227 AXIN2Q9Y2T1 843 aa11.85□□□□□ -0.51
RN7SL538P-201ENST00000494227 BCL9O00512 1426 aa11.85□□□□□ -0.51
RN7SL538P-201ENST00000494227 COL24A1Q17RW2 1714 aa11.84□□□□□ -0.51
RN7SL538P-201ENST00000494227 TMPOP42166 694 aaKnown RBP11.84□□□□□ -0.51
RN7SL538P-201ENST00000494227 DDB1Q16531 1140 aa11.84□□□□□ -0.51
RN7SL538P-201ENST00000494227 SULT6B1Q6IMI4 303 aa11.84□□□□□ -0.51
RN7SL538P-201ENST00000494227 BCL11BQ9C0K0 894 aaPredicted RBP11.84□□□□□ -0.51
RN7SL538P-201ENST00000494227 USP54Q70EL1 1684 aa11.84□□□□□ -0.51
RN7SL538P-201ENST00000494227 KIF24Q5T7B8 1368 aa11.83□□□□□ -0.52
RN7SL538P-201ENST00000494227 PLSCR1O15162 318 aa11.83□□□□□ -0.52
RN7SL538P-201ENST00000494227 WWC1Q8IX03 1113 aa11.83□□□□□ -0.52
RN7SL538P-201ENST00000494227 WDR17Q8IZU2 1322 aa11.83□□□□□ -0.52
RN7SL538P-201ENST00000494227 QSER1Q2KHR3 1735 aa11.83□□□□□ -0.52
RN7SL538P-201ENST00000494227 MAP2P11137 1827 aaKnown RBP11.82□□□□□ -0.52
RN7SL538P-201ENST00000494227 NBPF6Q5VWK0 638 aa11.82□□□□□ -0.52
RN7SL538P-201ENST00000494227 TOM1L2Q6ZVM7 507 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms