RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 TTLL8A6PVC2 850 aa7.91□□□□□ -1.14
CD46-217ENST00000493796 SOBPA7XYQ1 873 aa7.91□□□□□ -1.14
CD46-217ENST00000493796 MAN1A2O60476 641 aa7.91□□□□□ -1.14
CD46-217ENST00000493796 MYCP01106 439 aaPredicted RBP7.91□□□□□ -1.14
CD46-217ENST00000493796 OXLD1Q5BKU9 147 aa7.91□□□□□ -1.14
CD46-217ENST00000493796 HDGFL1Q5TGJ6 251 aa7.91□□□□□ -1.14
CD46-217ENST00000493796 CYP2U1Q7Z449 544 aa7.91□□□□□ -1.14
CD46-217ENST00000493796 ZNF775Q96BV0 537 aaPredicted RBP7.91□□□□□ -1.14
CD46-217ENST00000493796 INSM2Q96T92 566 aaPredicted RBP7.91□□□□□ -1.14
CD46-217ENST00000493796 ESF1Q9H501 851 aaKnown RBP7.91□□□□□ -1.14
CD46-217ENST00000493796 CTSOP43234 321 aaPredicted RBP7.9□□□□□ -1.14
CD46-217ENST00000493796 USP4Q13107 963 aa7.9□□□□□ -1.14
CD46-217ENST00000493796 NFATC2IPQ8NCF5 419 aa7.9□□□□□ -1.14
CD46-217ENST00000493796 DNMT3LQ9UJW3 386 aa7.9□□□□□ -1.14
CD46-217ENST00000493796 POLMQ9NP87 494 aaPredicted RBP7.89□□□□□ -1.15
CD46-217ENST00000493796 A0A1W2PRU2 124 aa7.88□□□□□ -1.15
CD46-217ENST00000493796 SKIP12755 728 aa7.88□□□□□ -1.15
CD46-217ENST00000493796 GLMNQ92990 594 aa7.88□□□□□ -1.15
CD46-217ENST00000493796 SIRT1Q96EB6 747 aa7.88□□□□□ -1.15
CD46-217ENST00000493796 UCN2Q96RP3 112 aa7.88□□□□□ -1.15
CD46-217ENST00000493796 FIGNL2A6NMB9 653 aa7.87□□□□□ -1.15
CD46-217ENST00000493796 GNRH1P01148 92 aa7.87□□□□□ -1.15
CD46-217ENST00000493796 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.87□□□□□ -1.152e-8■■□□□ 13.6
CD46-217ENST00000493796 FOXD4L5Q5VV16 416 aaPredicted RBP7.87□□□□□ -1.15
CD46-217ENST00000493796 RNF217Q8TC41 542 aa7.87□□□□□ -1.15
CD46-217ENST00000493796 ARHGEF10LQ9HCE6 1279 aa7.87□□□□□ -1.15
CD46-217ENST00000493796 MEN1O00255 615 aa7.86□□□□□ -1.15
CD46-217ENST00000493796 LZTS3O60299 673 aaPredicted RBP7.86□□□□□ -1.15
CD46-217ENST00000493796 RNF144AP50876 292 aaPredicted RBP7.86□□□□□ -1.15
CD46-217ENST00000493796 CLN3Q13286 438 aa7.86□□□□□ -1.15
CD46-217ENST00000493796 USP17L5A8MUK1 530 aa7.85□□□□□ -1.15
CD46-217ENST00000493796 EML3Q32P44 896 aa7.85□□□□□ -1.15
CD46-217ENST00000493796 TBC1D9Q6ZT07 1266 aa7.85□□□□□ -1.15
CD46-217ENST00000493796 CALR3Q96L12 384 aaKnown RBP7.85□□□□□ -1.15
CD46-217ENST00000493796 RAB6BQ9NRW1 208 aa7.85□□□□□ -1.15
CD46-217ENST00000493796 NXF1Q9UBU9 619 aaKnown RBP7.85□□□□□ -1.15
CD46-217ENST00000493796 TERTO14746 1132 aaKnown RBP7.84□□□□□ -1.15
CD46-217ENST00000493796 GPC1P35052 558 aa7.84□□□□□ -1.15
CD46-217ENST00000493796 NCOA4Q13772 614 aa7.84□□□□□ -1.15
CD46-217ENST00000493796 NLRP3Q96P20 1036 aa7.84□□□□□ -1.15
CD46-217ENST00000493796 ZMYND15Q9H091 742 aa7.84□□□□□ -1.15
CD46-217ENST00000493796 ATP9BO43861 1147 aa7.83□□□□□ -1.16
CD46-217ENST00000493796 IL2RAP01589 272 aa7.83□□□□□ -1.16
CD46-217ENST00000493796 NFX1Q12986 1120 aaKnown RBP7.83□□□□□ -1.16
CD46-217ENST00000493796 PLEKHM2Q8IWE5 1019 aa7.83□□□□□ -1.16
CD46-217ENST00000493796 NPAS3Q8IXF0 933 aa7.83□□□□□ -1.16
CD46-217ENST00000493796 DEPDC4Q8N2C3 294 aa7.83□□□□□ -1.16
CD46-217ENST00000493796 CNKSR1Q969H4 720 aa7.83□□□□□ -1.16
CD46-217ENST00000493796 ESYT1Q9BSJ8 1104 aa7.83□□□□□ -1.16
CD46-217ENST00000493796 ZNF777Q9ULD5 760 aaPredicted RBP7.83□□□□□ -1.16
CD46-217ENST00000493796 HRH3Q9Y5N1 445 aa7.83□□□□□ -1.16
CD46-217ENST00000493796 STAU1O95793 577 aaKnown RBP7.82□□□□□ -1.16
CD46-217ENST00000493796 PTSQ03393 145 aa7.82□□□□□ -1.16
CD46-217ENST00000493796 ESCO1Q5FWF5 840 aa7.82□□□□□ -1.16
CD46-217ENST00000493796 TREML4Q6UXN2 200 aa7.82□□□□□ -1.16
CD46-217ENST00000493796 LYSMD3Q7Z3D4 306 aa7.82□□□□□ -1.16
CD46-217ENST00000493796 XAGE2Q96GT9 111 aa7.82□□□□□ -1.16
CD46-217ENST00000493796 ETNK1Q9HBU6 452 aa7.82□□□□□ -1.16
CD46-217ENST00000493796 NOD1Q9Y239 953 aa7.82□□□□□ -1.16
CD46-217ENST00000493796 PCDHGA11Q9Y5H2 935 aa7.82□□□□□ -1.16
CD46-217ENST00000493796 USP17L3A6NCW0 530 aa7.81□□□□□ -1.16
CD46-217ENST00000493796 USP17L4A6NCW7 530 aa7.81□□□□□ -1.16
CD46-217ENST00000493796 SCNN1DP51172 638 aa7.81□□□□□ -1.16
CD46-217ENST00000493796 USP17L2Q6R6M4 530 aa7.81□□□□□ -1.16
CD46-217ENST00000493796 USP17L1Q7RTZ2 530 aa7.81□□□□□ -1.16
CD46-217ENST00000493796 GRIP2Q9C0E4 1043 aa7.81□□□□□ -1.16
CD46-217ENST00000493796 H3BM21 787 aa7.8□□□□□ -1.16
CD46-217ENST00000493796 PPFIA3O75145 1194 aa7.8□□□□□ -1.16
CD46-217ENST00000493796 WFS1O76024 890 aa7.8□□□□□ -1.16
CD46-217ENST00000493796 VEGFBP49765 207 aa7.8□□□□□ -1.16
CD46-217ENST00000493796 GDF10P55107 478 aa7.8□□□□□ -1.16
CD46-217ENST00000493796 GTF2IP78347 998 aa7.8□□□□□ -1.16
CD46-217ENST00000493796 CENPCQ03188 943 aa7.8□□□□□ -1.16
CD46-217ENST00000493796 SLC27A3Q5K4L6 730 aa7.8□□□□□ -1.16
CD46-217ENST00000493796 LCE2AQ5TA79 106 aaPredicted RBP7.8□□□□□ -1.16
CD46-217ENST00000493796 PRICKLE2Q7Z3G6 844 aa7.8□□□□□ -1.16
CD46-217ENST00000493796 TFIP11Q9UBB9 837 aaKnown RBP7.8□□□□□ -1.16
CD46-217ENST00000493796 SLC35F4A4IF30 521 aa7.79□□□□□ -1.16
CD46-217ENST00000493796 PALM3A6NDB9 673 aaPredicted RBP7.79□□□□□ -1.16
CD46-217ENST00000493796 SLC16A10Q8TF71 515 aa7.79□□□□□ -1.16
CD46-217ENST00000493796 PPP1R12CQ9BZL4 782 aa7.79□□□□□ -1.16
CD46-217ENST00000493796 FHDC1Q9C0D6 1143 aaPredicted RBP7.79□□□□□ -1.16
CD46-217ENST00000493796 MAFBQ9Y5Q3 323 aaPredicted RBP7.79□□□□□ -1.16
CD46-217ENST00000493796 SENP3-EIF4A1A0A087X0R7 540 aa7.78□□□□□ -1.16
CD46-217ENST00000493796 TMEM229AB2RXF0 380 aa7.78□□□□□ -1.16
CD46-217ENST00000493796 SPATA31C2B4DYI2 1134 aa7.78□□□□□ -1.16
CD46-217ENST00000493796 WASLO00401 505 aaPredicted RBP7.78□□□□□ -1.16
CD46-217ENST00000493796 INHAP05111 366 aa7.78□□□□□ -1.16
CD46-217ENST00000493796 RHOQP17081 205 aa7.78□□□□□ -1.16
CD46-217ENST00000493796 CCDC155Q8N6L0 562 aa7.78□□□□□ -1.16
CD46-217ENST00000493796 POU4F2Q12837 409 aa7.77□□□□□ -1.17
CD46-217ENST00000493796 LCE2CQ5TA81 110 aa7.77□□□□□ -1.17
CD46-217ENST00000493796 TRIM50Q86XT4 487 aa7.77□□□□□ -1.17
CD46-217ENST00000493796 ZSCAN10Q96SZ4 725 aaPredicted RBP7.77□□□□□ -1.17
CD46-217ENST00000493796 MKRN1Q9UHC7 482 aaKnown RBP7.77□□□□□ -1.17
CD46-217ENST00000493796 TLR1Q15399 786 aa7.76□□□□□ -1.17
CD46-217ENST00000493796 NBPF10Q6P3W6 841 aaKnown RBP7.76□□□□□ -1.17
CD46-217ENST00000493796 NBPF15Q8N660 670 aa7.76□□□□□ -1.17
CD46-217ENST00000493796 ATP1A2P50993 1020 aa7.75□□□□□ -1.17
CD46-217ENST00000493796 CLDN10P78369 228 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms