RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 IRF6O14896 467 aa13.51□□□□□ -0.25
PRPF3-206ENST00000493553 HNRNPUQ00839 825 aaKnown RBP eCLIP13.51□□□□□ -0.25
PRPF3-206ENST00000493553 NLRP13Q86W25 1043 aa13.51□□□□□ -0.25
PRPF3-206ENST00000493553 IL21Q9HBE4 155 aa13.51□□□□□ -0.25
PRPF3-206ENST00000493553 DAXXQ9UER7 740 aaPredicted RBP13.51□□□□□ -0.25
PRPF3-206ENST00000493553 ARHGEF40Q8TER5 1519 aa13.5□□□□□ -0.25
PRPF3-206ENST00000493553 NPC1L1Q9UHC9 1359 aa13.5□□□□□ -0.25
PRPF3-206ENST00000493553 SLC10A3P09131 477 aa13.5□□□□□ -0.25
PRPF3-206ENST00000493553 IFT172Q9UG01 1749 aa13.5□□□□□ -0.25
PRPF3-206ENST00000493553 DISP3Q9P2K9 1392 aa13.49□□□□□ -0.25
PRPF3-206ENST00000493553 ZBED9Q6R2W3 1325 aa13.49□□□□□ -0.25
PRPF3-206ENST00000493553 CFAP70Q5T0N1 1121 aa13.49□□□□□ -0.25
PRPF3-206ENST00000493553 KNSTRNQ9Y448 316 aa13.49□□□□□ -0.25
PRPF3-206ENST00000493553 UGGT1Q9NYU2 1555 aa13.49□□□□□ -0.25
PRPF3-206ENST00000493553 PARD3Q8TEW0 1356 aa13.48□□□□□ -0.25
PRPF3-206ENST00000493553 CENPJQ9HC77 1338 aaPredicted RBP13.48□□□□□ -0.25
PRPF3-206ENST00000493553 PER1O15534 1290 aaPredicted RBP13.48□□□□□ -0.25
PRPF3-206ENST00000493553 CFHP08603 1231 aa13.48□□□□□ -0.25
PRPF3-206ENST00000493553 IDI1Q13907 227 aa13.48□□□□□ -0.25
PRPF3-206ENST00000493553 KMT5BQ4FZB7 885 aa13.48□□□□□ -0.25
PRPF3-206ENST00000493553 ERVK-7P63135 1459 aa13.47□□□□□ -0.25
PRPF3-206ENST00000493553 SYNMO15061 1565 aa13.46□□□□□ -0.25
PRPF3-206ENST00000493553 ACTN4O43707 911 aaKnown RBP13.46□□□□□ -0.25
PRPF3-206ENST00000493553 FAM9BQ8IZU0 186 aa13.46□□□□□ -0.25
PRPF3-206ENST00000493553 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRPF3-206ENST00000493553 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
PRPF3-206ENST00000493553 PANK3Q9H999 370 aa13.46□□□□□ -0.25
PRPF3-206ENST00000493553 PPLO60437 1756 aa13.45□□□□□ -0.26
PRPF3-206ENST00000493553 RGS20O76081 388 aa13.45□□□□□ -0.26
PRPF3-206ENST00000493553 PCDHB3Q9Y5E6 796 aa13.45□□□□□ -0.26
PRPF3-206ENST00000493553 TSPOAP1O95153 1857 aa13.44□□□□□ -0.26
PRPF3-206ENST00000493553 ERICH6BQ5W0A0 696 aa13.44□□□□□ -0.26
PRPF3-206ENST00000493553 PNISRQ8TF01 805 aaKnown RBP13.44□□□□□ -0.26
PRPF3-206ENST00000493553 CCDC102AQ96A19 550 aa13.44□□□□□ -0.26
PRPF3-206ENST00000493553 PREX1Q8TCU6 1659 aa13.44□□□□□ -0.26
PRPF3-206ENST00000493553 MYO3AQ8NEV4 1616 aa13.43□□□□□ -0.26
PRPF3-206ENST00000493553 ZMYND10O75800 440 aa13.43□□□□□ -0.26
PRPF3-206ENST00000493553 ZC3H15Q8WU90 426 aaKnown RBP13.43□□□□□ -0.26
PRPF3-206ENST00000493553 KIF13AQ9H1H9 1805 aa13.43□□□□□ -0.26
PRPF3-206ENST00000493553 MROH2AA6NES4 1674 aa13.43□□□□□ -0.26
PRPF3-206ENST00000493553 NEXMIFQ5QGS0 1516 aa13.43□□□□□ -0.26
PRPF3-206ENST00000493553 NINLQ9Y2I6 1382 aa13.43□□□□□ -0.26
PRPF3-206ENST00000493553 COPS2P61201 443 aa13.42□□□□□ -0.26
PRPF3-206ENST00000493553 BARGINQ6ZT62 677 aa13.42□□□□□ -0.26
PRPF3-206ENST00000493553 SULF1Q8IWU6 871 aa13.42□□□□□ -0.26
PRPF3-206ENST00000493553 ZNF516Q92618 1163 aa13.42□□□□□ -0.26
PRPF3-206ENST00000493553 EVC2Q86UK5 1308 aa13.41□□□□□ -0.26
PRPF3-206ENST00000493553 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
PRPF3-206ENST00000493553 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
PRPF3-206ENST00000493553 LRPPRCP42704 1394 aaKnown RBP13.41□□□□□ -0.26
PRPF3-206ENST00000493553 DDX11L8A8MPP1 907 aa13.4□□□□□ -0.26
PRPF3-206ENST00000493553 RDH13Q8NBN7 331 aa13.4□□□□□ -0.26
PRPF3-206ENST00000493553 KDM5AP29375 1690 aaKnown RBP13.4□□□□□ -0.26
PRPF3-206ENST00000493553 ASXL1Q8IXJ9 1541 aa13.39□□□□□ -0.27
PRPF3-206ENST00000493553 TMEM131LA2VDJ0 1609 aa13.39□□□□□ -0.27
PRPF3-206ENST00000493553 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
PRPF3-206ENST00000493553 ZPR1O75312 459 aa13.39□□□□□ -0.27
PRPF3-206ENST00000493553 BLOC1S3Q6QNY0 202 aa13.39□□□□□ -0.27
PRPF3-206ENST00000493553 ZMYM3Q14202 1370 aa13.38□□□□□ -0.27
PRPF3-206ENST00000493553 PDE3BQ13370 1112 aa13.38□□□□□ -0.27
PRPF3-206ENST00000493553 CCDC184Q52MB2 194 aa13.38□□□□□ -0.27
PRPF3-206ENST00000493553 NGEFQ8N5V2 710 aa13.37□□□□□ -0.27
PRPF3-206ENST00000493553 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
PRPF3-206ENST00000493553 TRAK1Q9UPV9 953 aa13.37□□□□□ -0.27
PRPF3-206ENST00000493553 CFAP65Q6ZU64 1925 aaKnown RBP13.37□□□□□ -0.27
PRPF3-206ENST00000493553 FBXO31Q5XUX0 539 aaPredicted RBP13.36□□□□□ -0.27
PRPF3-206ENST00000493553 TNRQ92752 1358 aa13.35□□□□□ -0.27
PRPF3-206ENST00000493553 MDM2Q00987 491 aaPredicted RBP13.35□□□□□ -0.27
PRPF3-206ENST00000493553 SUPT16HQ9Y5B9 1047 aaKnown RBP13.35□□□□□ -0.27
PRPF3-206ENST00000493553 A2ML1A8K2U0 1454 aa13.35□□□□□ -0.27
PRPF3-206ENST00000493553 NSD2O96028 1365 aa13.34□□□□□ -0.27
PRPF3-206ENST00000493553 RIMS2Q9UQ26 1411 aa13.34□□□□□ -0.27
PRPF3-206ENST00000493553 GCGRP47871 477 aa13.34□□□□□ -0.27
PRPF3-206ENST00000493553 CC2D1BQ5T0F9 858 aaKnown RBP13.34□□□□□ -0.27
PRPF3-206ENST00000493553 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
PRPF3-206ENST00000493553 CLTCQ00610 1675 aaKnown RBP13.34□□□□□ -0.27
PRPF3-206ENST00000493553 ATAD2Q6PL18 1390 aa13.33□□□□□ -0.27
PRPF3-206ENST00000493553 SMG6Q86US8 1419 aaKnown RBP13.33□□□□□ -0.28
PRPF3-206ENST00000493553 NR1I2O75469 434 aa13.33□□□□□ -0.28
PRPF3-206ENST00000493553 MLECQ14165 292 aa13.33□□□□□ -0.28
PRPF3-206ENST00000493553 NKX2-3Q8TAU0 364 aa13.33□□□□□ -0.28
PRPF3-206ENST00000493553 NLRP1Q9C000 1473 aa13.33□□□□□ -0.28
PRPF3-206ENST00000493553 YTHDC2Q9H6S0 1430 aaKnown RBP13.32□□□□□ -0.28
PRPF3-206ENST00000493553 CLCN1P35523 988 aa13.32□□□□□ -0.28
PRPF3-206ENST00000493553 WDR43Q15061 677 aaKnown RBP eCLIP13.32□□□□□ -0.28
PRPF3-206ENST00000493553 TMEM132EQ6IEE7 984 aa13.32□□□□□ -0.28
PRPF3-206ENST00000493553 BCANQ96GW7 911 aa13.32□□□□□ -0.28
PRPF3-206ENST00000493553 GPCPD1Q9NPB8 672 aa13.32□□□□□ -0.28
PRPF3-206ENST00000493553 POGKQ9P215 609 aa13.32□□□□□ -0.28
PRPF3-206ENST00000493553 CGNL1Q0VF96 1302 aa13.32□□□□□ -0.28
PRPF3-206ENST00000493553 DLC1Q96QB1 1528 aa13.31□□□□□ -0.28
PRPF3-206ENST00000493553 CD46P15529 392 aa13.31□□□□□ -0.28
PRPF3-206ENST00000493553 PPP2R1AP30153 589 aa13.31□□□□□ -0.28
PRPF3-206ENST00000493553 TMUB1Q9BVT8 246 aa13.31□□□□□ -0.28
PRPF3-206ENST00000493553 ABCC11Q96J66 1382 aa13.31□□□□□ -0.28
PRPF3-206ENST00000493553 CNGB1Q14028 1251 aaPredicted RBP13.3□□□□□ -0.28
PRPF3-206ENST00000493553 PPP1R18Q6NYC8 613 aa13.3□□□□□ -0.28
PRPF3-206ENST00000493553 TERF2IPQ9NYB0 399 aa13.3□□□□□ -0.28
PRPF3-206ENST00000493553 NUDCQ9Y266 331 aa13.3□□□□□ -0.28
PRPF3-206ENST00000493553 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms