RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 ZNF837Q96EG3 531 aaPredicted RBP12.48□□□□□ -0.41
COL12A1-209ENST00000493109 GIGYF1O75420 1035 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-209ENST00000493109 PNMA1Q8ND90 353 aa12.47□□□□□ -0.41
COL12A1-209ENST00000493109 CELA2BP08218 269 aaPredicted RBP12.46□□□□□ -0.41
COL12A1-209ENST00000493109 GJD4Q96KN9 370 aaPredicted RBP12.46□□□□□ -0.41
COL12A1-209ENST00000493109 DNMT3AQ9Y6K1 912 aaPredicted RBP12.46□□□□□ -0.41
COL12A1-209ENST00000493109 GPR25O00155 361 aa12.44□□□□□ -0.42
COL12A1-209ENST00000493109 FBXO45P0C2W1 286 aa12.44□□□□□ -0.42
COL12A1-209ENST00000493109 ATP5J2-PTCD1G3V325 749 aa12.43□□□□□ -0.42
COL12A1-209ENST00000493109 MARSP56192 900 aaKnown RBP12.43□□□□□ -0.42
COL12A1-209ENST00000493109 DBN1Q16643 649 aa12.43□□□□□ -0.42
COL12A1-209ENST00000493109 ZBBXA8MT70 800 aa12.42□□□□□ -0.42
COL12A1-209ENST00000493109 GPAT2Q6NUI2 795 aa12.42□□□□□ -0.42
COL12A1-209ENST00000493109 TRIM22Q8IYM9 498 aa12.42□□□□□ -0.42
COL12A1-209ENST00000493109 PCDHB9Q9Y5E1 797 aa12.41□□□□□ -0.42
COL12A1-209ENST00000493109 A0A1W2PRU2 124 aa12.4□□□□□ -0.42
COL12A1-209ENST00000493109 MEN1O00255 615 aa12.4□□□□□ -0.42
COL12A1-209ENST00000493109 ERVK-9P63128 1117 aa12.4□□□□□ -0.42
COL12A1-209ENST00000493109 KANK3Q6NY19 840 aa12.4□□□□□ -0.42
COL12A1-209ENST00000493109 GPR37L1O60883 481 aa12.39□□□□□ -0.43
COL12A1-209ENST00000493109 GPC1P35052 558 aa12.39□□□□□ -0.43
COL12A1-209ENST00000493109 SCTRP47872 440 aa12.39□□□□□ -0.43
COL12A1-209ENST00000493109 SCARF2Q96GP6 870 aaPredicted RBP12.39□□□□□ -0.43
COL12A1-209ENST00000493109 MBIPQ9NS73 344 aa12.39□□□□□ -0.43
COL12A1-209ENST00000493109 POU4F2Q12837 409 aa12.37□□□□□ -0.43
COL12A1-209ENST00000493109 GOPCQ9HD26 462 aa12.37□□□□□ -0.43
COL12A1-209ENST00000493109 IGF1RP08069 1367 aa12.37□□□□□ -0.43
COL12A1-209ENST00000493109 MAP3K10Q02779 954 aa12.36□□□□□ -0.43
COL12A1-209ENST00000493109 CC2D2BQ6DHV5 1058 aa12.36□□□□□ -0.43
COL12A1-209ENST00000493109 GRIP2Q9C0E4 1043 aa12.36□□□□□ -0.43
COL12A1-209ENST00000493109 DYRK1BQ9Y463 629 aa12.36□□□□□ -0.43
COL12A1-209ENST00000493109 ITGB2P05107 769 aa12.35□□□□□ -0.43
COL12A1-209ENST00000493109 TMEM259Q4ZIN3 620 aa12.35□□□□□ -0.43
COL12A1-209ENST00000493109 RIPOR1Q6ZS17 1223 aa12.35□□□□□ -0.43
COL12A1-209ENST00000493109 GTPBP3Q969Y2 492 aaKnown RBP12.35□□□□□ -0.43
COL12A1-209ENST00000493109 GMCL1Q96IK5 515 aa12.35□□□□□ -0.43
COL12A1-209ENST00000493109 ACDQ96AP0 544 aa12.34□□□□□ -0.43
COL12A1-209ENST00000493109 CNTNAP5Q8WYK1 1306 aa12.34□□□□□ -0.43
COL12A1-209ENST00000493109 THBS1P07996 1170 aa12.33□□□□□ -0.44
COL12A1-209ENST00000493109 PCMTD1Q96MG8 357 aaPredicted RBP12.33□□□□□ -0.44
COL12A1-209ENST00000493109 OSBPL3Q9H4L5 887 aa12.33□□□□□ -0.44
COL12A1-209ENST00000493109 TRAK2O60296 914 aa12.32□□□□□ -0.44
COL12A1-209ENST00000493109 IGHA1P01876 353 aa12.32□□□□□ -0.44
COL12A1-209ENST00000493109 CLN3Q13286 438 aa12.32□□□□□ -0.44
COL12A1-209ENST00000493109 NBPF10Q6P3W6 841 aaKnown RBP12.32□□□□□ -0.44
COL12A1-209ENST00000493109 NBPF15Q8N660 670 aa12.32□□□□□ -0.44
COL12A1-209ENST00000493109 GAS2L1Q99501 681 aaPredicted RBP12.31□□□□□ -0.44
COL12A1-209ENST00000493109 SPATA31C2B4DYI2 1134 aa12.3□□□□□ -0.44
COL12A1-209ENST00000493109 FOXK2Q01167 660 aa12.3□□□□□ -0.44
COL12A1-209ENST00000493109 ARHGEF10LQ9HCE6 1279 aa12.3□□□□□ -0.44
COL12A1-209ENST00000493109 BCRP11274 1271 aa12.29□□□□□ -0.44
COL12A1-209ENST00000493109 NR1H3Q13133 447 aa12.29□□□□□ -0.44
COL12A1-209ENST00000493109 SLC27A3Q5K4L6 730 aa12.29□□□□□ -0.44
COL12A1-209ENST00000493109 PLA2G4EQ3MJ16 856 aa12.28□□□□□ -0.44
COL12A1-209ENST00000493109 DCAF5Q96JK2 942 aa12.28□□□□□ -0.44
COL12A1-209ENST00000493109 CYP2U1Q7Z449 544 aa12.27□□□□□ -0.45
COL12A1-209ENST00000493109 CCDC125Q86Z20 511 aa12.27□□□□□ -0.45
COL12A1-209ENST00000493109 NLRP3Q96P20 1036 aa12.27□□□□□ -0.45
COL12A1-209ENST00000493109 ENAMQ9NRM1 1142 aa12.27□□□□□ -0.45
COL12A1-209ENST00000493109 RAB6BQ9NRW1 208 aa12.27□□□□□ -0.45
COL12A1-209ENST00000493109 PCDHB11Q9Y5F2 797 aa12.27□□□□□ -0.45
COL12A1-209ENST00000493109 RNF20Q5VTR2 975 aa12.26□□□□□ -0.45
COL12A1-209ENST00000493109 H7C1W4 665 aa12.25□□□□□ -0.45
COL12A1-209ENST00000493109 FOXR1Q6PIV2 292 aa12.25□□□□□ -0.45
COL12A1-209ENST00000493109 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
COL12A1-209ENST00000493109 WASLO00401 505 aaPredicted RBP12.24□□□□□ -0.45
COL12A1-209ENST00000493109 IL2RAP01589 272 aa12.24□□□□□ -0.45
COL12A1-209ENST00000493109 WDR44Q5JSH3 913 aa12.24□□□□□ -0.45
COL12A1-209ENST00000493109 MTMR14Q8NCE2 650 aa12.24□□□□□ -0.45
COL12A1-209ENST00000493109 TIMMDC1Q9NPL8 285 aa12.24□□□□□ -0.45
COL12A1-209ENST00000493109 IL27Q8NEV9 243 aa12.23□□□□□ -0.45
COL12A1-209ENST00000493109 NUCKS1Q9H1E3 243 aaKnown RBP12.23□□□□□ -0.45
COL12A1-209ENST00000493109 HRH3Q9Y5N1 445 aa12.23□□□□□ -0.45
COL12A1-209ENST00000493109 MX2P20592 715 aa12.22□□□□□ -0.45
COL12A1-209ENST00000493109 TAS1R3Q7RTX0 852 aa12.22□□□□□ -0.45
COL12A1-209ENST00000493109 NEDD1Q8NHV4 660 aa12.22□□□□□ -0.45
COL12A1-209ENST00000493109 TRERF1Q96PN7 1200 aa12.22□□□□□ -0.45
COL12A1-209ENST00000493109 PHF20L1A8MW92 1017 aa12.21□□□□□ -0.45
COL12A1-209ENST00000493109 F11P03951 625 aa12.21□□□□□ -0.45
COL12A1-209ENST00000493109 PROCP04070 461 aa12.21□□□□□ -0.45
COL12A1-209ENST00000493109 UBAP2LQ14157 1087 aaKnown RBP12.21□□□□□ -0.45
COL12A1-209ENST00000493109 SPOCK3Q9BQ16 436 aa12.21□□□□□ -0.45
COL12A1-209ENST00000493109 CDCA7Q9BWT1 371 aaPredicted RBP12.21□□□□□ -0.45
COL12A1-209ENST00000493109 OIP5O43482 229 aa12.2□□□□□ -0.46
COL12A1-209ENST00000493109 MCCD1P59942 119 aaPredicted RBP12.2□□□□□ -0.46
COL12A1-209ENST00000493109 C1orf229Q6ZS94 237 aaPredicted RBP12.2□□□□□ -0.46
COL12A1-209ENST00000493109 CCDC85AQ96PX6 553 aaPredicted RBP12.2□□□□□ -0.46
COL12A1-209ENST00000493109 SNRPNP63162 240 aaKnown RBP12.19□□□□□ -0.46
COL12A1-209ENST00000493109 BEND7Q8N7W2 519 aaPredicted RBP12.19□□□□□ -0.46
COL12A1-209ENST00000493109 CNKSR1Q969H4 720 aa12.19□□□□□ -0.46
COL12A1-209ENST00000493109 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
COL12A1-209ENST00000493109 LRRC4BQ9NT99 713 aa12.19□□□□□ -0.46
COL12A1-209ENST00000493109 SHISA8B8ZZ34 492 aa12.18□□□□□ -0.46
COL12A1-209ENST00000493109 CENPCQ03188 943 aa12.18□□□□□ -0.46
COL12A1-209ENST00000493109 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
COL12A1-209ENST00000493109 SOCS7O14512 581 aa12.17□□□□□ -0.46
COL12A1-209ENST00000493109 MSTNO14793 375 aa12.17□□□□□ -0.46
COL12A1-209ENST00000493109 GNRH1P01148 92 aa12.17□□□□□ -0.46
COL12A1-209ENST00000493109 NEUROD2Q15784 382 aa12.17□□□□□ -0.46
COL12A1-209ENST00000493109 GPAMQ9HCL2 828 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms