RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 POTEHQ6S545 545 aa7.92□□□□□ -1.14
SND1-216ENST00000492840 SH3BP5LQ7L8J4 393 aa7.92□□□□□ -1.14
SND1-216ENST00000492840 MKNK1Q9BUB5 465 aa7.92□□□□□ -1.14
SND1-216ENST00000492840 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.92□□□□□ -1.14
SND1-216ENST00000492840 LGR5O75473 907 aa7.91□□□□□ -1.14
SND1-216ENST00000492840 FKBP4Q02790 459 aaKnown RBP eCLIP7.91□□□□□ -1.14
SND1-216ENST00000492840 SF3B2Q13435 895 aaKnown RBP7.91□□□□□ -1.14
SND1-216ENST00000492840 MTMR3Q13615 1198 aa7.91□□□□□ -1.14
SND1-216ENST00000492840 TSNAXIP1Q2TAA8 658 aa7.91□□□□□ -1.14
SND1-216ENST00000492840 NAALADL2Q58DX5 795 aa7.91□□□□□ -1.14
SND1-216ENST00000492840 ZBTB33Q86T24 672 aa7.91□□□□□ -1.14
SND1-216ENST00000492840 DZIP3Q86Y13 1208 aaKnown RBP7.91□□□□□ -1.14
SND1-216ENST00000492840 RGL4Q8IZJ4 473 aa7.91□□□□□ -1.14
SND1-216ENST00000492840 PCDHGA11Q9Y5H2 935 aa7.91□□□□□ -1.14
SND1-216ENST00000492840 SMARCA4P51532 1647 aa7.91□□□□□ -1.14
SND1-216ENST00000492840 APLP1P51693 650 aa7.9□□□□□ -1.14
SND1-216ENST00000492840 PSME1Q06323 249 aa7.9□□□□□ -1.14
SND1-216ENST00000492840 EAPPQ56P03 285 aaPredicted RBP7.9□□□□□ -1.14
SND1-216ENST00000492840 MAMSTRQ6ZN01 415 aa7.9□□□□□ -1.14
SND1-216ENST00000492840 BCL11AQ9H165 835 aa7.9□□□□□ -1.14
SND1-216ENST00000492840 PCDHB3Q9Y5E6 796 aa7.9□□□□□ -1.14
SND1-216ENST00000492840 GIGYF1O75420 1035 aaPredicted RBP7.89□□□□□ -1.15
SND1-216ENST00000492840 WEE1P30291 646 aa7.89□□□□□ -1.15
SND1-216ENST00000492840 PBX2P40425 430 aa7.89□□□□□ -1.15
SND1-216ENST00000492840 MMP16P51512 607 aa7.89□□□□□ -1.15
SND1-216ENST00000492840 FKBP5Q13451 457 aaPredicted RBP7.89□□□□□ -1.15
SND1-216ENST00000492840 CAPN12Q6ZSI9 719 aa7.89□□□□□ -1.15
SND1-216ENST00000492840 UBXN4Q92575 508 aa7.89□□□□□ -1.15
SND1-216ENST00000492840 MRPL58Q14197 206 aaKnown RBP7.88□□□□□ -1.15
SND1-216ENST00000492840 SF3A1Q15459 793 aaKnown RBP7.88□□□□□ -1.15
SND1-216ENST00000492840 VARS2Q5ST30 1063 aaKnown RBP7.88□□□□□ -1.15
SND1-216ENST00000492840 MRPL50Q8N5N7 158 aaKnown RBP7.88□□□□□ -1.15
SND1-216ENST00000492840 FAM160A2Q8N612 972 aaPredicted RBP7.88□□□□□ -1.15
SND1-216ENST00000492840 PURBQ96QR8 312 aaKnown RBP7.88□□□□□ -1.15
SND1-216ENST00000492840 HINFPQ9BQA5 517 aa7.88□□□□□ -1.15
SND1-216ENST00000492840 PRDM9Q9NQV7 894 aa7.88□□□□□ -1.15
SND1-216ENST00000492840 ARAP1Q96P48 1450 aa7.87□□□□□ -1.15
SND1-216ENST00000492840 PTCD1O75127 700 aaKnown RBP7.87□□□□□ -1.15
SND1-216ENST00000492840 P4HBP07237 508 aaKnown RBP7.87□□□□□ -1.15
SND1-216ENST00000492840 CYB5RLQ6IPT4 315 aa7.87□□□□□ -1.15
SND1-216ENST00000492840 CARD14Q9BXL6 1004 aa7.87□□□□□ -1.15
SND1-216ENST00000492840 M0R2N6 131 aa7.86□□□□□ -1.15
SND1-216ENST00000492840 ERCC5P28715 1186 aaPredicted RBP7.86□□□□□ -1.15
SND1-216ENST00000492840 SH3RF1Q7Z6J0 888 aa7.86□□□□□ -1.15
SND1-216ENST00000492840 TSEN2Q8NCE0 465 aaKnown RBP7.86□□□□□ -1.15
SND1-216ENST00000492840 BACH2Q9BYV9 841 aa7.86□□□□□ -1.15
SND1-216ENST00000492840 UNC93B1Q9H1C4 597 aa7.86□□□□□ -1.15
SND1-216ENST00000492840 CEP164Q9UPV0 1460 aa7.86□□□□□ -1.15
SND1-216ENST00000492840 PEG3Q9GZU2 1588 aa7.85□□□□□ -1.15
SND1-216ENST00000492840 ERBB3P21860 1342 aa7.85□□□□□ -1.15
SND1-216ENST00000492840 MAGEB6P1A0A0J9YX57 407 aa7.85□□□□□ -1.15
SND1-216ENST00000492840 HDLBPQ00341 1268 aaKnown RBP7.85□□□□□ -1.15
SND1-216ENST00000492840 RNF20Q5VTR2 975 aa7.85□□□□□ -1.15
SND1-216ENST00000492840 HELQQ8TDG4 1101 aa7.85□□□□□ -1.15
SND1-216ENST00000492840 COL26A1Q96A83 441 aa7.85□□□□□ -1.15
SND1-216ENST00000492840 SPATA32Q96LK8 384 aa7.85□□□□□ -1.15
SND1-216ENST00000492840 SPSB2Q99619 263 aa7.85□□□□□ -1.15
SND1-216ENST00000492840 PPP1R1BQ9UD71 204 aaPredicted RBP7.85□□□□□ -1.15
SND1-216ENST00000492840 HPS5Q9UPZ3 1129 aa7.85□□□□□ -1.15
SND1-216ENST00000492840 SCAMP3O14828 347 aaKnown RBP7.84□□□□□ -1.15
SND1-216ENST00000492840 SMARCA5O60264 1052 aaPredicted RBP7.84□□□□□ -1.15
SND1-216ENST00000492840 NPR3P17342 541 aa7.84□□□□□ -1.15
SND1-216ENST00000492840 CANXP27824 592 aaKnown RBP7.84□□□□□ -1.15
SND1-216ENST00000492840 PPP4CP60510 307 aa7.84□□□□□ -1.15
SND1-216ENST00000492840 ERFEQ4G0M1 354 aa7.84□□□□□ -1.15
SND1-216ENST00000492840 TMC7Q7Z402 723 aa7.84□□□□□ -1.15
SND1-216ENST00000492840 RBCK1Q9BYM8 510 aa7.84□□□□□ -1.15
SND1-216ENST00000492840 CADPSQ9ULU8 1353 aa7.84□□□□□ -1.16
SND1-216ENST00000492840 TK2O00142 265 aa7.83□□□□□ -1.16
SND1-216ENST00000492840 USP4Q13107 963 aa7.83□□□□□ -1.16
SND1-216ENST00000492840 PTCRAQ6ISU1 281 aaPredicted RBP7.83□□□□□ -1.16
SND1-216ENST00000492840 PCDHB11Q9Y5F2 797 aa7.83□□□□□ -1.16
SND1-216ENST00000492840 ESPNB1AK53 854 aa7.82□□□□□ -1.16
SND1-216ENST00000492840 FAM13AO94988 1023 aa7.82□□□□□ -1.16
SND1-216ENST00000492840 FMR1Q06787 632 aaKnown RBP eCLIP7.82□□□□□ -1.169e-6■□□□□ 9.4
SND1-216ENST00000492840 NAA30Q147X3 362 aaPredicted RBP7.82□□□□□ -1.16
SND1-216ENST00000492840 NBPF20Q3BBV1 942 aa7.82□□□□□ -1.16
SND1-216ENST00000492840 LDLRAD1Q5T700 205 aa7.82□□□□□ -1.16
SND1-216ENST00000492840 ANKK1Q8NFD2 765 aa7.82□□□□□ -1.16
SND1-216ENST00000492840 GAS2L2Q8NHY3 880 aa7.82□□□□□ -1.16
SND1-216ENST00000492840 SOWAHBA6NEL2 793 aa7.81□□□□□ -1.16
SND1-216ENST00000492840 TREHO43280 583 aa7.81□□□□□ -1.16
SND1-216ENST00000492840 FOXO3O43524 673 aa7.81□□□□□ -1.16
SND1-216ENST00000492840 IGFBP4P22692 258 aa7.81□□□□□ -1.16
SND1-216ENST00000492840 C9orf131Q5VYM1 1079 aa7.81□□□□□ -1.16
SND1-216ENST00000492840 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.81□□□□□ -1.16
SND1-216ENST00000492840 SP7Q8TDD2 431 aaPredicted RBP7.81□□□□□ -1.16
SND1-216ENST00000492840 SLC10A4Q96EP9 437 aa7.81□□□□□ -1.16
SND1-216ENST00000492840 ZNF358Q9NW07 568 aa7.81□□□□□ -1.16
SND1-216ENST00000492840 TSR3Q9UJK0 312 aaKnown RBP7.81□□□□□ -1.16
SND1-216ENST00000492840 RSF1Q96T23 1441 aaPredicted RBP7.8□□□□□ -1.16
SND1-216ENST00000492840 MPSTP25325 297 aa7.8□□□□□ -1.16
SND1-216ENST00000492840 BCAMP50895 628 aa7.8□□□□□ -1.16
SND1-216ENST00000492840 RAD51AP2Q09MP3 1159 aa7.8□□□□□ -1.16
SND1-216ENST00000492840 PIK3R5Q8WYR1 880 aa7.8□□□□□ -1.16
SND1-216ENST00000492840 PCDH10Q9P2E7 1040 aa7.8□□□□□ -1.16
SND1-216ENST00000492840 NDUFB5O43674 189 aa7.79□□□□□ -1.16
SND1-216ENST00000492840 C4orf48Q5BLP8 95 aa7.79□□□□□ -1.16
SND1-216ENST00000492840 BPHLQ86WA6 291 aaPredicted RBP7.79□□□□□ -1.16
SND1-216ENST00000492840 CCDC24Q8N4L8 307 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms