RNA–Protein interactions for RNA: ENST00000492464.1

MMP11-212, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-212ENST00000492464 DDB1Q16531 1140 aa18.87■□□□□ 0.61
MMP11-212ENST00000492464 DLG5Q8TDM6 1919 aa18.87■□□□□ 0.61
MMP11-212ENST00000492464 HMOX1P09601 288 aa18.86■□□□□ 0.61
MMP11-212ENST00000492464 U2AF1L5P0DN76 240 aaPredicted RBP18.86■□□□□ 0.61
MMP11-212ENST00000492464 U2AF1Q01081 240 aaKnown RBP eCLIP18.86■□□□□ 0.61
MMP11-212ENST00000492464 AEBP1Q8IUX7 1158 aa18.86■□□□□ 0.61
MMP11-212ENST00000492464 PLEKHG2Q9H7P9 1386 aa18.85■□□□□ 0.61
MMP11-212ENST00000492464 EXOC5O00471 708 aa18.84■□□□□ 0.61
MMP11-212ENST00000492464 PDE3BQ13370 1112 aa18.84■□□□□ 0.61
MMP11-212ENST00000492464 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
MMP11-212ENST00000492464 MRS2Q9HD23 443 aa18.84■□□□□ 0.61
MMP11-212ENST00000492464 ILDR2Q71H61 639 aa18.82■□□□□ 0.6
MMP11-212ENST00000492464 KRT27Q7Z3Y8 459 aa18.82■□□□□ 0.6
MMP11-212ENST00000492464 ZCRB1Q8TBF4 217 aaKnown RBP18.82■□□□□ 0.6
MMP11-212ENST00000492464 DOT1LQ8TEK3 1739 aa18.82■□□□□ 0.6
MMP11-212ENST00000492464 ITGB4P16144 1822 aa18.81■□□□□ 0.6
MMP11-212ENST00000492464 SCN11AQ9UI33 1791 aa18.81■□□□□ 0.6
MMP11-212ENST00000492464 SPG7Q9UQ90 795 aa18.81■□□□□ 0.6
MMP11-212ENST00000492464 PCDH11XQ9BZA7 1347 aa18.8■□□□□ 0.6
MMP11-212ENST00000492464 PCDH11YQ9BZA8 1340 aa18.8■□□□□ 0.6
MMP11-212ENST00000492464 FCHSD2O94868 740 aa18.8■□□□□ 0.6
MMP11-212ENST00000492464 CCDC184Q52MB2 194 aa18.8■□□□□ 0.6
MMP11-212ENST00000492464 RSPH6AQ9H0K4 717 aa18.8■□□□□ 0.6
MMP11-212ENST00000492464 PRKAR2BP31323 418 aa18.79■□□□□ 0.6
MMP11-212ENST00000492464 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
MMP11-212ENST00000492464 PLEKHO1Q53GL0 409 aaPredicted RBP18.79■□□□□ 0.6
MMP11-212ENST00000492464 PNNQ9H307 717 aaKnown RBP18.79■□□□□ 0.6
MMP11-212ENST00000492464 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.79■□□□□ 0.6
MMP11-212ENST00000492464 NEFMP07197 916 aa18.78■□□□□ 0.6
MMP11-212ENST00000492464 EP400Q96L91 3159 aa18.77■□□□□ 0.6
MMP11-212ENST00000492464 NHSQ6T4R5 1651 aa18.77■□□□□ 0.6
MMP11-212ENST00000492464 CCER2I3L3R5 266 aa18.77■□□□□ 0.6
MMP11-212ENST00000492464 DDX54Q8TDD1 881 aaKnown RBP18.77■□□□□ 0.6
MMP11-212ENST00000492464 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.59
MMP11-212ENST00000492464 MIER1Q8N108 512 aa18.76■□□□□ 0.59
MMP11-212ENST00000492464 MARCH10Q8NA82 808 aaPredicted RBP18.76■□□□□ 0.59
MMP11-212ENST00000492464 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
MMP11-212ENST00000492464 MAPK8IP3Q9UPT6 1336 aa18.74■□□□□ 0.59
MMP11-212ENST00000492464 TNS1Q9HBL0 1735 aaKnown RBP18.74■□□□□ 0.59
MMP11-212ENST00000492464 C1orf141Q5JVX7 400 aa18.74■□□□□ 0.59
MMP11-212ENST00000492464 ADAMTS8Q9UP79 889 aa18.74■□□□□ 0.59
MMP11-212ENST00000492464 BTAF1O14981 1849 aa18.74■□□□□ 0.59
MMP11-212ENST00000492464 FAM182BQ5T319 152 aa18.73■□□□□ 0.59
MMP11-212ENST00000492464 FAM196AQ6ZSG2 479 aa18.73■□□□□ 0.59
MMP11-212ENST00000492464 IFNL2Q8IZJ0 200 aa18.73■□□□□ 0.59
MMP11-212ENST00000492464 GAS2L2Q8NHY3 880 aa18.73■□□□□ 0.59
MMP11-212ENST00000492464 PNISRQ8TF01 805 aaKnown RBP18.73■□□□□ 0.59
MMP11-212ENST00000492464 CYP27B1O15528 508 aa18.72■□□□□ 0.59
MMP11-212ENST00000492464 BCL9O00512 1426 aa18.72■□□□□ 0.59
MMP11-212ENST00000492464 ADAMTS7Q9UKP4 1686 aa18.71■□□□□ 0.59
MMP11-212ENST00000492464 PHKG2P15735 406 aa18.71■□□□□ 0.59
MMP11-212ENST00000492464 MTHFSDQ2M296 383 aaKnown RBP18.71■□□□□ 0.59
MMP11-212ENST00000492464 PHACTR3Q96KR7 559 aa18.71■□□□□ 0.59
MMP11-212ENST00000492464 HSP90AB1P08238 724 aaKnown RBP18.7■□□□□ 0.58
MMP11-212ENST00000492464 CCDC146Q8IYE0 955 aa18.7■□□□□ 0.58
MMP11-212ENST00000492464 PLEKHF1Q96S99 279 aa18.7■□□□□ 0.58
MMP11-212ENST00000492464 SIPA1L3O60292 1781 aaPredicted RBP18.7■□□□□ 0.58
MMP11-212ENST00000492464 AKAP4Q5JQC9 854 aa18.69■□□□□ 0.58
MMP11-212ENST00000492464 FAM9BQ8IZU0 186 aa18.69■□□□□ 0.58
MMP11-212ENST00000492464 RUNDC1Q96C34 613 aa18.69■□□□□ 0.58
MMP11-212ENST00000492464 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
MMP11-212ENST00000492464 RGPD3A6NKT7 1758 aaPredicted RBP18.66■□□□□ 0.58
MMP11-212ENST00000492464 RGPD4Q7Z3J3 1758 aa18.66■□□□□ 0.58
MMP11-212ENST00000492464 NKX1-1Q15270 411 aaPredicted RBP18.66■□□□□ 0.58
MMP11-212ENST00000492464 KDM6AO15550 1401 aaPredicted RBP18.66■□□□□ 0.58
MMP11-212ENST00000492464 GNAT3A8MTJ3 354 aa18.65■□□□□ 0.58
MMP11-212ENST00000492464 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
MMP11-212ENST00000492464 ACSBG1Q96GR2 724 aa18.65■□□□□ 0.58
MMP11-212ENST00000492464 DCAF5Q96JK2 942 aa18.65■□□□□ 0.58
MMP11-212ENST00000492464 TRIM37O94972 964 aa18.64■□□□□ 0.57
MMP11-212ENST00000492464 MPRIPQ6WCQ1 1025 aa18.64■□□□□ 0.57
MMP11-212ENST00000492464 RTF1Q92541 710 aaKnown RBP18.63■□□□□ 0.57
MMP11-212ENST00000492464 SYTL4Q96C24 671 aaPredicted RBP18.63■□□□□ 0.57
MMP11-212ENST00000492464 LY75O60449 1722 aa18.63■□□□□ 0.57
MMP11-212ENST00000492464 TMPOP42166 694 aaKnown RBP18.62■□□□□ 0.57
MMP11-212ENST00000492464 SF3B2Q13435 895 aaKnown RBP18.62■□□□□ 0.57
MMP11-212ENST00000492464 MRC1P22897 1456 aa18.62■□□□□ 0.57
MMP11-212ENST00000492464 PAPPAQ13219 1627 aa18.61■□□□□ 0.57
MMP11-212ENST00000492464 ERVV-2B6SEH9 535 aa18.61■□□□□ 0.57
MMP11-212ENST00000492464 PRIM1P49642 420 aaKnown RBP18.61■□□□□ 0.57
MMP11-212ENST00000492464 BCL11BQ9C0K0 894 aaPredicted RBP18.61■□□□□ 0.57
MMP11-212ENST00000492464 RNMTO43148 476 aaKnown RBP18.6■□□□□ 0.57
MMP11-212ENST00000492464 HTATSF1O43719 755 aaKnown RBP18.6■□□□□ 0.57
MMP11-212ENST00000492464 RIPK4P57078 832 aa18.6■□□□□ 0.57
MMP11-212ENST00000492464 LMOD3Q0VAK6 560 aa18.6■□□□□ 0.57
MMP11-212ENST00000492464 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
MMP11-212ENST00000492464 TMOD3Q9NYL9 352 aa18.6■□□□□ 0.57
MMP11-212ENST00000492464 RRP7AQ9Y3A4 280 aaKnown RBP18.6■□□□□ 0.57
MMP11-212ENST00000492464 SOCS7O14512 581 aa18.59■□□□□ 0.57
MMP11-212ENST00000492464 APAF1O14727 1248 aa18.59■□□□□ 0.57
MMP11-212ENST00000492464 KCNQ2O43526 872 aa18.59■□□□□ 0.57
MMP11-212ENST00000492464 CABP4P57796 275 aa18.59■□□□□ 0.57
MMP11-212ENST00000492464 CCDC125Q86Z20 511 aa18.59■□□□□ 0.57
MMP11-212ENST00000492464 UBR2Q8IWV8 1755 aa18.58■□□□□ 0.57
MMP11-212ENST00000492464 LGR6Q9HBX8 967 aa18.58■□□□□ 0.56
MMP11-212ENST00000492464 KDM3BQ7LBC6 1761 aa18.58■□□□□ 0.56
MMP11-212ENST00000492464 CEMIPQ8WUJ3 1361 aa18.57■□□□□ 0.56
MMP11-212ENST00000492464 TEFQ10587 303 aa18.57■□□□□ 0.56
MMP11-212ENST00000492464 UPF1Q92900 1129 aaKnown RBP eCLIP18.57■□□□□ 0.56
MMP11-212ENST00000492464 TAF1LQ8IZX4 1826 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms