RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 EXOC5O00471 708 aa31.06■■■□□ 2.56
SCN5A-213ENST00000491944 PDE3BQ13370 1112 aa31.06■■■□□ 2.56
SCN5A-213ENST00000491944 TNS2Q63HR2 1409 aa31.06■■■□□ 2.56
SCN5A-213ENST00000491944 KRT27Q7Z3Y8 459 aa31.05■■■□□ 2.56
SCN5A-213ENST00000491944 CCDC184Q52MB2 194 aa31.03■■■□□ 2.56
SCN5A-213ENST00000491944 ZCRB1Q8TBF4 217 aaKnown RBP31.03■■■□□ 2.56
SCN5A-213ENST00000491944 PKD1L3Q7Z443 1732 aa31.01■■■□□ 2.56
SCN5A-213ENST00000491944 MRS2Q9HD23 443 aa31.01■■■□□ 2.55
SCN5A-213ENST00000491944 SHANK3Q9BYB0 1731 aa31■■■□□ 2.55
SCN5A-213ENST00000491944 WDR43Q15061 677 aaKnown RBP eCLIP30.99■■■□□ 2.55
SCN5A-213ENST00000491944 FAM182BQ5T319 152 aa30.98■■■□□ 2.55
SCN5A-213ENST00000491944 DDX54Q8TDD1 881 aaKnown RBP30.98■■■□□ 2.55
SCN5A-213ENST00000491944 SPG7Q9UQ90 795 aa30.97■■■□□ 2.55
SCN5A-213ENST00000491944 MARCH10Q8NA82 808 aaPredicted RBP30.96■■■□□ 2.55
SCN5A-213ENST00000491944 RSPH6AQ9H0K4 717 aa30.96■■■□□ 2.55
SCN5A-213ENST00000491944 PLEKHG2Q9H7P9 1386 aa30.95■■■□□ 2.55
SCN5A-213ENST00000491944 PRKAR2BP31323 418 aa30.95■■■□□ 2.55
SCN5A-213ENST00000491944 PLEKHO1Q53GL0 409 aaPredicted RBP30.95■■■□□ 2.55
SCN5A-213ENST00000491944 PCDH11XQ9BZA7 1347 aa30.94■■■□□ 2.54
SCN5A-213ENST00000491944 PCDH11YQ9BZA8 1340 aa30.94■■■□□ 2.54
SCN5A-213ENST00000491944 FCHSD2O94868 740 aa30.94■■■□□ 2.54
SCN5A-213ENST00000491944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.94■■■□□ 2.54
SCN5A-213ENST00000491944 AMOTQ4VCS5 1084 aa30.92■■■□□ 2.54
SCN5A-213ENST00000491944 ZNF530Q6P9A1 599 aaPredicted RBP30.9■■■□□ 2.54
SCN5A-213ENST00000491944 MIER1Q8N108 512 aa30.9■■■□□ 2.54
SCN5A-213ENST00000491944 CYP27B1O15528 508 aa30.88■■■□□ 2.53
SCN5A-213ENST00000491944 FAM196AQ6ZSG2 479 aa30.88■■■□□ 2.53
SCN5A-213ENST00000491944 PNNQ9H307 717 aaKnown RBP30.88■■■□□ 2.53
SCN5A-213ENST00000491944 ADAMTS8Q9UP79 889 aa30.88■■■□□ 2.53
SCN5A-213ENST00000491944 NEFMP07197 916 aa30.87■■■□□ 2.53
SCN5A-213ENST00000491944 PHACTR3Q96KR7 559 aa30.86■■■□□ 2.53
SCN5A-213ENST00000491944 MTHFSDQ2M296 383 aaKnown RBP30.85■■■□□ 2.53
SCN5A-213ENST00000491944 IFNL2Q8IZJ0 200 aa30.85■■■□□ 2.53
SCN5A-213ENST00000491944 KAT6BQ8WYB5 2073 aa30.85■■■□□ 2.53
SCN5A-213ENST00000491944 PHKG2P15735 406 aa30.84■■■□□ 2.53
SCN5A-213ENST00000491944 C1orf141Q5JVX7 400 aa30.84■■■□□ 2.53
SCN5A-213ENST00000491944 PNISRQ8TF01 805 aaKnown RBP30.84■■■□□ 2.53
SCN5A-213ENST00000491944 CCER2I3L3R5 266 aa30.83■■■□□ 2.53
SCN5A-213ENST00000491944 MAPK8IP3Q9UPT6 1336 aa30.83■■■□□ 2.53
SCN5A-213ENST00000491944 SBF2Q86WG5 1849 aa30.82■■■□□ 2.52
SCN5A-213ENST00000491944 CCDC146Q8IYE0 955 aa30.82■■■□□ 2.52
SCN5A-213ENST00000491944 PLEKHF1Q96S99 279 aa30.82■■■□□ 2.52
SCN5A-213ENST00000491944 GAS2L2Q8NHY3 880 aa30.81■■■□□ 2.52
SCN5A-213ENST00000491944 DOT1LQ8TEK3 1739 aa30.81■■■□□ 2.52
SCN5A-213ENST00000491944 BCL9O00512 1426 aa30.81■■■□□ 2.52
SCN5A-213ENST00000491944 EP400Q96L91 3159 aa30.8■■■□□ 2.52
SCN5A-213ENST00000491944 AKAP4Q5JQC9 854 aa30.79■■■□□ 2.52
SCN5A-213ENST00000491944 ACSBG1Q96GR2 724 aa30.79■■■□□ 2.52
SCN5A-213ENST00000491944 HSP90AB1P08238 724 aaKnown RBP30.78■■■□□ 2.52
SCN5A-213ENST00000491944 TRIM37O94972 964 aa30.77■■■□□ 2.52
SCN5A-213ENST00000491944 NKX1-1Q15270 411 aaPredicted RBP30.77■■■□□ 2.52
SCN5A-213ENST00000491944 FAM9BQ8IZU0 186 aa30.77■■■□□ 2.52
SCN5A-213ENST00000491944 RUNDC1Q96C34 613 aa30.77■■■□□ 2.52
SCN5A-213ENST00000491944 TOGARAM1Q9Y4F4 1720 aa30.76■■■□□ 2.51
SCN5A-213ENST00000491944 NHSQ6T4R5 1651 aa30.75■■■□□ 2.51
SCN5A-213ENST00000491944 VIRMAQ69YN4 1812 aaKnown RBP30.75■■■□□ 2.51
SCN5A-213ENST00000491944 MPRIPQ6WCQ1 1025 aa30.74■■■□□ 2.51
SCN5A-213ENST00000491944 MAP3K5Q99683 1374 aa30.74■■■□□ 2.51
SCN5A-213ENST00000491944 DLG5Q8TDM6 1919 aa30.73■■■□□ 2.51
SCN5A-213ENST00000491944 SYTL4Q96C24 671 aaPredicted RBP30.73■■■□□ 2.51
SCN5A-213ENST00000491944 DCAF5Q96JK2 942 aa30.73■■■□□ 2.51
SCN5A-213ENST00000491944 KDM6AO15550 1401 aaPredicted RBP30.72■■■□□ 2.51
SCN5A-213ENST00000491944 SCN11AQ9UI33 1791 aa30.72■■■□□ 2.51
SCN5A-213ENST00000491944 GNAT3A8MTJ3 354 aa30.71■■■□□ 2.51
SCN5A-213ENST00000491944 KCNQ2O43526 872 aa30.71■■■□□ 2.51
SCN5A-213ENST00000491944 PRIM1P49642 420 aaKnown RBP30.71■■■□□ 2.51
SCN5A-213ENST00000491944 NFE2L2Q16236 605 aa30.71■■■□□ 2.51
SCN5A-213ENST00000491944 ITGB4P16144 1822 aa30.71■■■□□ 2.51
SCN5A-213ENST00000491944 TNS1Q9HBL0 1735 aaKnown RBP30.7■■■□□ 2.51
SCN5A-213ENST00000491944 UPF1Q92900 1129 aaKnown RBP eCLIP30.69■■■□□ 2.5
SCN5A-213ENST00000491944 BCL11BQ9C0K0 894 aaPredicted RBP30.69■■■□□ 2.5
SCN5A-213ENST00000491944 SF3B2Q13435 895 aaKnown RBP30.68■■■□□ 2.5
SCN5A-213ENST00000491944 PTF1AQ7RTS3 328 aa30.68■■■□□ 2.5
SCN5A-213ENST00000491944 RNMTO43148 476 aaKnown RBP30.66■■■□□ 2.5
SCN5A-213ENST00000491944 LGR6Q9HBX8 967 aa30.66■■■□□ 2.5
SCN5A-213ENST00000491944 RRP7AQ9Y3A4 280 aaKnown RBP30.66■■■□□ 2.5
SCN5A-213ENST00000491944 BTAF1O14981 1849 aa30.66■■■□□ 2.5
SCN5A-213ENST00000491944 TMPOP42166 694 aaKnown RBP30.66■■■□□ 2.5
SCN5A-213ENST00000491944 NEUROD2Q15784 382 aa30.66■■■□□ 2.5
SCN5A-213ENST00000491944 RTF1Q92541 710 aaKnown RBP30.66■■■□□ 2.5
SCN5A-213ENST00000491944 ADAMTS7Q9UKP4 1686 aa30.65■■■□□ 2.5
SCN5A-213ENST00000491944 ERVV-2B6SEH9 535 aa30.65■■■□□ 2.5
SCN5A-213ENST00000491944 CCDC125Q86Z20 511 aa30.65■■■□□ 2.5
SCN5A-213ENST00000491944 APAF1O14727 1248 aa30.64■■■□□ 2.5
SCN5A-213ENST00000491944 RIPK4P57078 832 aa30.64■■■□□ 2.5
SCN5A-213ENST00000491944 CABP4P57796 275 aa30.64■■■□□ 2.5
SCN5A-213ENST00000491944 TMOD3Q9NYL9 352 aa30.64■■■□□ 2.5
SCN5A-213ENST00000491944 APBA3O96018 575 aa30.62■■■□□ 2.49
SCN5A-213ENST00000491944 HTATSF1O43719 755 aaKnown RBP30.61■■■□□ 2.49
SCN5A-213ENST00000491944 MCM10Q7L590 875 aa30.61■■■□□ 2.49
SCN5A-213ENST00000491944 IL17REQ8NFR9 667 aa30.61■■■□□ 2.49
SCN5A-213ENST00000491944 DCTN1Q14203 1278 aa30.6■■■□□ 2.49
SCN5A-213ENST00000491944 SOCS7O14512 581 aa30.59■■■□□ 2.49
SCN5A-213ENST00000491944 PIGBQ92521 554 aa30.59■■■□□ 2.49
SCN5A-213ENST00000491944 SENP3-EIF4A1A0A087X0R7 540 aa30.58■■■□□ 2.49
SCN5A-213ENST00000491944 LMOD3Q0VAK6 560 aa30.58■■■□□ 2.49
SCN5A-213ENST00000491944 NFATC2IPQ8NCF5 419 aa30.58■■■□□ 2.49
SCN5A-213ENST00000491944 MRC1P22897 1456 aa30.58■■■□□ 2.49
SCN5A-213ENST00000491944 CEMIPQ8WUJ3 1361 aa30.58■■■□□ 2.49
SCN5A-213ENST00000491944 BAG6P46379 1132 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms