RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 FBLN1P23142 703 aa11.09□□□□□ -0.63
RNF38-209ENST00000491349 RXRBP28702 533 aa11.09□□□□□ -0.63
RNF38-209ENST00000491349 RBM6P78332 1123 aaKnown RBP11.09□□□□□ -0.63
RNF38-209ENST00000491349 CDCA7Q9BWT1 371 aaPredicted RBP11.09□□□□□ -0.63
RNF38-209ENST00000491349 PNNQ9H307 717 aaKnown RBP11.09□□□□□ -0.63
RNF38-209ENST00000491349 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
RNF38-209ENST00000491349 ERBB3P21860 1342 aa11.09□□□□□ -0.63
RNF38-209ENST00000491349 HSP90AB2PQ58FF8 381 aa11.08□□□□□ -0.64
RNF38-209ENST00000491349 TCP11L2Q8N4U5 519 aa11.08□□□□□ -0.64
RNF38-209ENST00000491349 GJD4Q96KN9 370 aaPredicted RBP11.08□□□□□ -0.64
RNF38-209ENST00000491349 CARD10Q9BWT7 1032 aa11.08□□□□□ -0.64
RNF38-209ENST00000491349 USP35Q9P2H5 1018 aa11.08□□□□□ -0.64
RNF38-209ENST00000491349 BCL9LQ86UU0 1499 aa11.07□□□□□ -0.64
RNF38-209ENST00000491349 PEAK1Q9H792 1746 aa11.07□□□□□ -0.64
RNF38-209ENST00000491349 WDR43Q15061 677 aaKnown RBP eCLIP11.07□□□□□ -0.64
RNF38-209ENST00000491349 RAPGEF4Q8WZA2 1011 aa11.07□□□□□ -0.64
RNF38-209ENST00000491349 AXIN2Q9Y2T1 843 aa11.07□□□□□ -0.64
RNF38-209ENST00000491349 U2SURPO15042 1029 aaKnown RBP11.06□□□□□ -0.64
RNF38-209ENST00000491349 LARP1Q6PKG0 1096 aaKnown RBP11.06□□□□□ -0.64
RNF38-209ENST00000491349 ATRNO75882 1429 aa11.06□□□□□ -0.64
RNF38-209ENST00000491349 SPATA31A1Q5TZJ5 1347 aa11.06□□□□□ -0.64
RNF38-209ENST00000491349 SPATA31A5Q5VU36 1347 aa11.06□□□□□ -0.64
RNF38-209ENST00000491349 SPATA31A7Q8IWB4 1347 aa11.06□□□□□ -0.64
RNF38-209ENST00000491349 CD44P16070 742 aaKnown RBP11.05□□□□□ -0.64
RNF38-209ENST00000491349 TATP17735 454 aaPredicted RBP11.05□□□□□ -0.64
RNF38-209ENST00000491349 PARP4Q9UKK3 1724 aaKnown RBP11.04□□□□□ -0.64
RNF38-209ENST00000491349 IL2RBP14784 551 aa11.04□□□□□ -0.64
RNF38-209ENST00000491349 EIF4A2Q14240 407 aaKnown RBP11.04□□□□□ -0.64
RNF38-209ENST00000491349 BARGINQ6ZT62 677 aa11.04□□□□□ -0.64
RNF38-209ENST00000491349 RGPD2P0DJD1 1756 aa11.03□□□□□ -0.64
RNF38-209ENST00000491349 U2AF1L5P0DN76 240 aaPredicted RBP11.03□□□□□ -0.64
RNF38-209ENST00000491349 U2AF1Q01081 240 aaKnown RBP eCLIP11.03□□□□□ -0.64
RNF38-209ENST00000491349 PDE3BQ13370 1112 aa11.03□□□□□ -0.64
RNF38-209ENST00000491349 FAM98CQ17RN3 349 aaKnown RBP11.03□□□□□ -0.64
RNF38-209ENST00000491349 MRS2Q9HD23 443 aa11.03□□□□□ -0.64
RNF38-209ENST00000491349 WNK3Q9BYP7 1800 aa11.02□□□□□ -0.64
RNF38-209ENST00000491349 EXOC5O00471 708 aa11.02□□□□□ -0.65
RNF38-209ENST00000491349 DDB1Q16531 1140 aa11.02□□□□□ -0.65
RNF38-209ENST00000491349 PROM2Q8N271 834 aa11.02□□□□□ -0.65
RNF38-209ENST00000491349 SPG7Q9UQ90 795 aa11.02□□□□□ -0.65
RNF38-209ENST00000491349 IL13P35225 146 aa11.01□□□□□ -0.65
RNF38-209ENST00000491349 NBPF6Q5VWK0 638 aa11.01□□□□□ -0.65
RNF38-209ENST00000491349 SULT6B1Q6IMI4 303 aa11.01□□□□□ -0.65
RNF38-209ENST00000491349 NBPF4Q96M43 638 aa11.01□□□□□ -0.65
RNF38-209ENST00000491349 EYA1Q99502 592 aa11.01□□□□□ -0.65
RNF38-209ENST00000491349 IGSF1Q8N6C5 1336 aa11.01□□□□□ -0.65
RNF38-209ENST00000491349 MAPK8IP3Q9UPT6 1336 aa11.01□□□□□ -0.65
RNF38-209ENST00000491349 PLEKHG2Q9H7P9 1386 aa11.01□□□□□ -0.65
RNF38-209ENST00000491349 AMOTQ4VCS5 1084 aa11□□□□□ -0.65
RNF38-209ENST00000491349 PLEKHO1Q53GL0 409 aaPredicted RBP11□□□□□ -0.65
RNF38-209ENST00000491349 GLI3P10071 1580 aa10.99□□□□□ -0.65
RNF38-209ENST00000491349 CCER2I3L3R5 266 aa10.99□□□□□ -0.65
RNF38-209ENST00000491349 FCHSD2O94868 740 aa10.99□□□□□ -0.65
RNF38-209ENST00000491349 C1orf141Q5JVX7 400 aa10.99□□□□□ -0.65
RNF38-209ENST00000491349 POTEAQ6S8J7 498 aa10.99□□□□□ -0.65
RNF38-209ENST00000491349 SEPT12Q8IYM1 358 aa10.99□□□□□ -0.65
RNF38-209ENST00000491349 USHBP1Q8N6Y0 703 aa10.99□□□□□ -0.65
RNF38-209ENST00000491349 HMOX1P09601 288 aa10.98□□□□□ -0.65
RNF38-209ENST00000491349 ZCRB1Q8TBF4 217 aaKnown RBP10.98□□□□□ -0.65
RNF38-209ENST00000491349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.98□□□□□ -0.65
RNF38-209ENST00000491349 RGS17Q9UGC6 210 aaPredicted RBP10.98□□□□□ -0.65
RNF38-209ENST00000491349 PCDH11XQ9BZA7 1347 aa10.98□□□□□ -0.65
RNF38-209ENST00000491349 PCDH11YQ9BZA8 1340 aa10.98□□□□□ -0.65
RNF38-209ENST00000491349 COL3A1P02461 1466 aaPredicted RBP10.98□□□□□ -0.65
RNF38-209ENST00000491349 RGPD1P0DJD0 1748 aa10.98□□□□□ -0.65
RNF38-209ENST00000491349 ONECUT3O60422 494 aaPredicted RBP10.97□□□□□ -0.65
RNF38-209ENST00000491349 HSP90AB1P08238 724 aaKnown RBP10.97□□□□□ -0.65
RNF38-209ENST00000491349 KRT27Q7Z3Y8 459 aa10.97□□□□□ -0.65
RNF38-209ENST00000491349 GAS2L2Q8NHY3 880 aa10.97□□□□□ -0.65
RNF38-209ENST00000491349 THSD7AQ9UPZ6 1657 aa10.96□□□□□ -0.65
RNF38-209ENST00000491349 OVOS2A0A0G2JMS6 1433 aa10.96□□□□□ -0.65
RNF38-209ENST00000491349 TNS2Q63HR2 1409 aa10.96□□□□□ -0.65
RNF38-209ENST00000491349 KDRP35968 1356 aa10.96□□□□□ -0.65
RNF38-209ENST00000491349 PRKAR2BP31323 418 aa10.95□□□□□ -0.66
RNF38-209ENST00000491349 SF3B2Q13435 895 aaKnown RBP10.95□□□□□ -0.66
RNF38-209ENST00000491349 IFNL2Q8IZJ0 200 aa10.95□□□□□ -0.66
RNF38-209ENST00000491349 DDX54Q8TDD1 881 aaKnown RBP10.95□□□□□ -0.66
RNF38-209ENST00000491349 RTF1Q92541 710 aaKnown RBP10.95□□□□□ -0.66
RNF38-209ENST00000491349 LRRC37A3O60309 1634 aa10.95□□□□□ -0.66
RNF38-209ENST00000491349 DISP2A7MBM2 1401 aa10.94□□□□□ -0.66
RNF38-209ENST00000491349 RGS12O14924 1447 aa10.94□□□□□ -0.66
RNF38-209ENST00000491349 NCAPD2Q15021 1401 aa10.94□□□□□ -0.66
RNF38-209ENST00000491349 BRWD3Q6RI45 1802 aa10.94□□□□□ -0.66
RNF38-209ENST00000491349 LMOD3Q0VAK6 560 aa10.94□□□□□ -0.66
RNF38-209ENST00000491349 ZNF530Q6P9A1 599 aaPredicted RBP10.94□□□□□ -0.66
RNF38-209ENST00000491349 FAM196AQ6ZSG2 479 aa10.94□□□□□ -0.66
RNF38-209ENST00000491349 RUNDC1Q96C34 613 aa10.94□□□□□ -0.66
RNF38-209ENST00000491349 PKD1L3Q7Z443 1732 aa10.94□□□□□ -0.66
RNF38-209ENST00000491349 KAT6BQ8WYB5 2073 aa10.94□□□□□ -0.66
RNF38-209ENST00000491349 MNX1P50219 401 aaPredicted RBP10.93□□□□□ -0.66
RNF38-209ENST00000491349 CLCN6P51797 869 aa10.93□□□□□ -0.66
RNF38-209ENST00000491349 AEBP1Q8IUX7 1158 aa10.93□□□□□ -0.66
RNF38-209ENST00000491349 FAM9BQ8IZU0 186 aa10.93□□□□□ -0.66
RNF38-209ENST00000491349 RSPH6AQ9H0K4 717 aa10.93□□□□□ -0.66
RNF38-209ENST00000491349 MEGF6O75095 1541 aa10.93□□□□□ -0.66
RNF38-209ENST00000491349 MIER1Q8N108 512 aa10.92□□□□□ -0.66
RNF38-209ENST00000491349 GNAT3A8MTJ3 354 aa10.91□□□□□ -0.66
RNF38-209ENST00000491349 HMGB2P26583 209 aaKnown RBP10.91□□□□□ -0.66
RNF38-209ENST00000491349 AKAP4Q5JQC9 854 aa10.91□□□□□ -0.66
RNF38-209ENST00000491349 ZNF579Q8NAF0 562 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms