RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 PDE3BQ13370 1112 aa10.51□□□□□ -0.73
CLDN1-202ENST00000490800 FAM196AQ6ZSG2 479 aa10.51□□□□□ -0.73
CLDN1-202ENST00000490800 BARGINQ6ZT62 677 aa10.51□□□□□ -0.73
CLDN1-202ENST00000490800 TCP11L2Q8N4U5 519 aa10.51□□□□□ -0.73
CLDN1-202ENST00000490800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.51□□□□□ -0.73
CLDN1-202ENST00000490800 QRICH2Q9H0J4 1663 aa10.5□□□□□ -0.73
CLDN1-202ENST00000490800 CAMTA1Q9Y6Y1 1673 aa10.5□□□□□ -0.73
CLDN1-202ENST00000490800 SSH2Q76I76 1423 aa10.5□□□□□ -0.73
CLDN1-202ENST00000490800 TRIM37O94972 964 aa10.5□□□□□ -0.73
CLDN1-202ENST00000490800 PRKCSHP14314 528 aaPredicted RBP10.5□□□□□ -0.73
CLDN1-202ENST00000490800 DIEXFQ68CQ4 756 aaKnown RBP10.5□□□□□ -0.73
CLDN1-202ENST00000490800 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
CLDN1-202ENST00000490800 PHRF1Q9P1Y6 1649 aaKnown RBP10.5□□□□□ -0.73
CLDN1-202ENST00000490800 CLCN6P51797 869 aa10.49□□□□□ -0.73
CLDN1-202ENST00000490800 TMC1Q8TDI8 760 aa10.49□□□□□ -0.73
CLDN1-202ENST00000490800 THRAP3Q9Y2W1 955 aaKnown RBP10.49□□□□□ -0.73
CLDN1-202ENST00000490800 PSDA5PKW4 1024 aaPredicted RBP10.48□□□□□ -0.73
CLDN1-202ENST00000490800 EZH2Q15910 746 aaKnown RBP10.48□□□□□ -0.73
CLDN1-202ENST00000490800 ARHGEF25Q86VW2 580 aa10.48□□□□□ -0.73
CLDN1-202ENST00000490800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLDN1-202ENST00000490800 KCNH5Q8NCM2 988 aa10.48□□□□□ -0.73
CLDN1-202ENST00000490800 AATKQ6ZMQ8 1374 aa10.48□□□□□ -0.73
CLDN1-202ENST00000490800 NRKQ7Z2Y5 1582 aa10.48□□□□□ -0.73
CLDN1-202ENST00000490800 C11orf95C9JLR9 678 aaPredicted RBP10.47□□□□□ -0.73
CLDN1-202ENST00000490800 APBA3O96018 575 aa10.47□□□□□ -0.73
CLDN1-202ENST00000490800 TPRNQ4KMQ1 711 aa10.47□□□□□ -0.73
CLDN1-202ENST00000490800 TOM1L2Q6ZVM7 507 aa10.47□□□□□ -0.73
CLDN1-202ENST00000490800 KCNV2Q8TDN2 545 aa10.47□□□□□ -0.73
CLDN1-202ENST00000490800 SLC12A5Q9H2X9 1139 aa10.47□□□□□ -0.73
CLDN1-202ENST00000490800 TTC21AQ8NDW8 1320 aa10.47□□□□□ -0.73
CLDN1-202ENST00000490800 KTN1Q86UP2 1357 aaKnown RBP10.47□□□□□ -0.73
CLDN1-202ENST00000490800 THSD7AQ9UPZ6 1657 aa10.47□□□□□ -0.73
CLDN1-202ENST00000490800 ST20-MTHFSA0A0A6YYL1 179 aa10.46□□□□□ -0.73
CLDN1-202ENST00000490800 CAMKK2Q96RR4 588 aa10.46□□□□□ -0.73
CLDN1-202ENST00000490800 WASHC2AQ641Q2 1341 aa10.46□□□□□ -0.73
CLDN1-202ENST00000490800 CPSF1Q10570 1443 aaKnown RBP10.46□□□□□ -0.74
CLDN1-202ENST00000490800 COL5A2P05997 1499 aaPredicted RBP10.46□□□□□ -0.74
CLDN1-202ENST00000490800 ATN1P54259 1190 aaPredicted RBP10.45□□□□□ -0.74
CLDN1-202ENST00000490800 R3HDM1Q15032 1099 aaKnown RBP10.45□□□□□ -0.74
CLDN1-202ENST00000490800 LMO7Q8WWI1 1683 aa10.44□□□□□ -0.74
CLDN1-202ENST00000490800 SLIT3O75094 1523 aa10.44□□□□□ -0.74
CLDN1-202ENST00000490800 CRB1P82279 1406 aa10.44□□□□□ -0.74
CLDN1-202ENST00000490800 CCDC7Q96M83 1385 aa10.44□□□□□ -0.74
CLDN1-202ENST00000490800 SBNO2Q9Y2G9 1366 aa10.44□□□□□ -0.74
CLDN1-202ENST00000490800 WDR17Q8IZU2 1322 aa10.44□□□□□ -0.74
CLDN1-202ENST00000490800 CSB-PGBD3P0DP91 1061 aa10.44□□□□□ -0.74
CLDN1-202ENST00000490800 DDB1Q16531 1140 aa10.44□□□□□ -0.74
CLDN1-202ENST00000490800 HDGFL2Q7Z4V5 671 aaPredicted RBP10.44□□□□□ -0.74
CLDN1-202ENST00000490800 NME9Q86XW9 330 aa10.44□□□□□ -0.74
CLDN1-202ENST00000490800 KIF7Q2M1P5 1343 aa10.43□□□□□ -0.74
CLDN1-202ENST00000490800 ATMINO43313 823 aaPredicted RBP10.43□□□□□ -0.74
CLDN1-202ENST00000490800 DDX10Q13206 875 aaKnown RBP10.43□□□□□ -0.74
CLDN1-202ENST00000490800 TESK2Q96S53 571 aa10.43□□□□□ -0.74
CLDN1-202ENST00000490800 PIK3C2AO00443 1686 aa10.42□□□□□ -0.74
CLDN1-202ENST00000490800 PUS7Q96PZ0 661 aaKnown RBP10.42□□□□□ -0.74
CLDN1-202ENST00000490800 LARP6Q9BRS8 491 aaKnown RBP10.42□□□□□ -0.74
CLDN1-202ENST00000490800 CARD10Q9BWT7 1032 aa10.42□□□□□ -0.74
CLDN1-202ENST00000490800 TERF2IPQ9NYB0 399 aa10.42□□□□□ -0.74
CLDN1-202ENST00000490800 DISP2A7MBM2 1401 aa10.41□□□□□ -0.74
CLDN1-202ENST00000490800 USP31Q70CQ4 1352 aa10.41□□□□□ -0.74
CLDN1-202ENST00000490800 MARCH10Q8NA82 808 aaPredicted RBP10.41□□□□□ -0.74
CLDN1-202ENST00000490800 CDCA7Q9BWT1 371 aaPredicted RBP10.41□□□□□ -0.74
CLDN1-202ENST00000490800 CD163L1Q9NR16 1453 aa10.41□□□□□ -0.74
CLDN1-202ENST00000490800 EXOC5O00471 708 aa10.4□□□□□ -0.74
CLDN1-202ENST00000490800 GABBR2O75899 941 aa10.4□□□□□ -0.74
CLDN1-202ENST00000490800 ASTLQ6HA08 431 aaPredicted RBP10.4□□□□□ -0.74
CLDN1-202ENST00000490800 DPY19L2Q6NUT2 758 aa10.4□□□□□ -0.74
CLDN1-202ENST00000490800 PTF1AQ7RTS3 328 aa10.4□□□□□ -0.74
CLDN1-202ENST00000490800 RGPD1P0DJD0 1748 aa10.4□□□□□ -0.74
CLDN1-202ENST00000490800 COL18A1P39060 1754 aa10.39□□□□□ -0.75
CLDN1-202ENST00000490800 PDE4AP27815 886 aa10.39□□□□□ -0.75
CLDN1-202ENST00000490800 NBPF14Q5TI25 921 aa10.39□□□□□ -0.75
CLDN1-202ENST00000490800 NLRP2Q9NX02 1062 aa10.39□□□□□ -0.75
CLDN1-202ENST00000490800 AKAP12Q02952 1782 aa10.39□□□□□ -0.75
CLDN1-202ENST00000490800 A0A1W2PP64 1363 aa10.39□□□□□ -0.75
CLDN1-202ENST00000490800 E2F4Q16254 413 aa10.38□□□□□ -0.75
CLDN1-202ENST00000490800 PDCD7Q8N8D1 485 aaKnown RBP10.38□□□□□ -0.75
CLDN1-202ENST00000490800 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
CLDN1-202ENST00000490800 PARD3Q8TEW0 1356 aa10.38□□□□□ -0.75
CLDN1-202ENST00000490800 NFAT5O94916 1531 aa10.38□□□□□ -0.75
CLDN1-202ENST00000490800 OVOS2A0A0G2JMS6 1433 aa10.37□□□□□ -0.75
CLDN1-202ENST00000490800 OVOS2A0A0J9YW53 1432 aa10.37□□□□□ -0.75
CLDN1-202ENST00000490800 PLSCR1O15162 318 aa10.37□□□□□ -0.75
CLDN1-202ENST00000490800 FBLN1P23142 703 aa10.37□□□□□ -0.75
CLDN1-202ENST00000490800 OVOS2Q6IE36 1432 aa10.37□□□□□ -0.75
CLDN1-202ENST00000490800 EDC4Q6P2E9 1401 aaKnown RBP10.37□□□□□ -0.75
CLDN1-202ENST00000490800 ANKRD24Q8TF21 1146 aa10.37□□□□□ -0.75
CLDN1-202ENST00000490800 DDX27Q96GQ7 796 aaKnown RBP10.37□□□□□ -0.75
CLDN1-202ENST00000490800 TNS1Q9HBL0 1735 aaKnown RBP10.37□□□□□ -0.75
CLDN1-202ENST00000490800 ERBB3P21860 1342 aa10.36□□□□□ -0.75
CLDN1-202ENST00000490800 PARP4Q9UKK3 1724 aaKnown RBP10.36□□□□□ -0.75
CLDN1-202ENST00000490800 TMF1P82094 1093 aa10.36□□□□□ -0.75
CLDN1-202ENST00000490800 IP6K1Q92551 441 aa10.36□□□□□ -0.75
CLDN1-202ENST00000490800 LTV1Q96GA3 475 aaPredicted RBP10.36□□□□□ -0.75
CLDN1-202ENST00000490800 COG3Q96JB2 828 aa10.36□□□□□ -0.75
CLDN1-202ENST00000490800 DCBLD2Q96PD2 775 aa10.36□□□□□ -0.75
CLDN1-202ENST00000490800 POLR3GLQ9BT43 218 aa10.36□□□□□ -0.75
CLDN1-202ENST00000490800 KCNQ2O43526 872 aa10.35□□□□□ -0.75
CLDN1-202ENST00000490800 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
CLDN1-202ENST00000490800 IER5LQ5T953 404 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms