RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 ADAMTS2O95450 1211 aa8.24□□□□□ -1.09
RBM39-235ENST00000490354 RHOQP17081 205 aa8.24□□□□□ -1.09
RBM39-235ENST00000490354 LYPD4Q6UWN0 246 aa8.24□□□□□ -1.09
RBM39-235ENST00000490354 SEPT12Q8IYM1 358 aa8.24□□□□□ -1.09
RBM39-235ENST00000490354 IRS1P35568 1242 aa8.23□□□□□ -1.09
RBM39-235ENST00000490354 GAS6Q14393 721 aa8.23□□□□□ -1.09
RBM39-235ENST00000490354 SHROOM4Q9ULL8 1493 aa8.23□□□□□ -1.09
RBM39-235ENST00000490354 GIGYF1O75420 1035 aaPredicted RBP8.22□□□□□ -1.09
RBM39-235ENST00000490354 RNF144AP50876 292 aaPredicted RBP8.22□□□□□ -1.09
RBM39-235ENST00000490354 RB1CC1Q8TDY2 1594 aa8.22□□□□□ -1.09
RBM39-235ENST00000490354 ATP5J2-PTCD1G3V325 749 aa8.21□□□□□ -1.1
RBM39-235ENST00000490354 MARSP56192 900 aaKnown RBP8.21□□□□□ -1.1
RBM39-235ENST00000490354 SRSF11Q05519 484 aaKnown RBP8.21□□□□□ -1.1
RBM39-235ENST00000490354 PCDHB9Q9Y5E1 797 aa8.21□□□□□ -1.1
RBM39-235ENST00000490354 ZBBXA8MT70 800 aa8.2□□□□□ -1.1
RBM39-235ENST00000490354 MEN1O00255 615 aa8.19□□□□□ -1.1
RBM39-235ENST00000490354 CELA2BP08218 269 aaPredicted RBP8.19□□□□□ -1.1
RBM39-235ENST00000490354 FBXO45P0C2W1 286 aa8.19□□□□□ -1.1
RBM39-235ENST00000490354 ZNF837Q96EG3 531 aaPredicted RBP8.19□□□□□ -1.1
RBM39-235ENST00000490354 GJD4Q96KN9 370 aaPredicted RBP8.19□□□□□ -1.1
RBM39-235ENST00000490354 PCMTD1Q96MG8 357 aaPredicted RBP8.19□□□□□ -1.1
RBM39-235ENST00000490354 GPR25O00155 361 aa8.18□□□□□ -1.1
RBM39-235ENST00000490354 MAP3K10Q02779 954 aa8.18□□□□□ -1.1
RBM39-235ENST00000490354 TMEM259Q4ZIN3 620 aa8.18□□□□□ -1.1
RBM39-235ENST00000490354 SCARF2Q96GP6 870 aaPredicted RBP8.18□□□□□ -1.1
RBM39-235ENST00000490354 GOPCQ9HD26 462 aa8.18□□□□□ -1.1
RBM39-235ENST00000490354 DNMT3AQ9Y6K1 912 aaPredicted RBP8.18□□□□□ -1.1
RBM39-235ENST00000490354 A0A1W2PRU2 124 aa8.17□□□□□ -1.1
RBM39-235ENST00000490354 GPC1P35052 558 aa8.17□□□□□ -1.1
RBM39-235ENST00000490354 DBN1Q16643 649 aa8.17□□□□□ -1.1
RBM39-235ENST00000490354 GPAT2Q6NUI2 795 aa8.17□□□□□ -1.1
RBM39-235ENST00000490354 RIPOR1Q6ZS17 1223 aa8.17□□□□□ -1.1
RBM39-235ENST00000490354 TRIM22Q8IYM9 498 aa8.17□□□□□ -1.1
RBM39-235ENST00000490354 TRIM52Q96A61 297 aa8.17□□□□□ -1.1
RBM39-235ENST00000490354 ERVK-9P63128 1117 aa8.16□□□□□ -1.1
RBM39-235ENST00000490354 CC2D2BQ6DHV5 1058 aa8.16□□□□□ -1.1
RBM39-235ENST00000490354 KANK3Q6NY19 840 aa8.16□□□□□ -1.1
RBM39-235ENST00000490354 MBIPQ9NS73 344 aa8.16□□□□□ -1.1
RBM39-235ENST00000490354 POU4F2Q12837 409 aa8.15□□□□□ -1.1
RBM39-235ENST00000490354 GMCL1Q96IK5 515 aa8.15□□□□□ -1.1
RBM39-235ENST00000490354 IGF1RP08069 1367 aa8.14□□□□□ -1.11
RBM39-235ENST00000490354 SCTRP47872 440 aa8.14□□□□□ -1.11
RBM39-235ENST00000490354 SLC27A3Q5K4L6 730 aa8.14□□□□□ -1.11
RBM39-235ENST00000490354 GAS2L1Q99501 681 aaPredicted RBP8.14□□□□□ -1.11
RBM39-235ENST00000490354 DYRK1BQ9Y463 629 aa8.14□□□□□ -1.11
RBM39-235ENST00000490354 RNF20Q5VTR2 975 aa8.13□□□□□ -1.11
RBM39-235ENST00000490354 FOXR1Q6PIV2 292 aa8.13□□□□□ -1.11
RBM39-235ENST00000490354 CCDC125Q86Z20 511 aa8.13□□□□□ -1.11
RBM39-235ENST00000490354 GTPBP3Q969Y2 492 aaKnown RBP8.13□□□□□ -1.11
RBM39-235ENST00000490354 NLRP3Q96P20 1036 aa8.13□□□□□ -1.11
RBM39-235ENST00000490354 GRIP2Q9C0E4 1043 aa8.13□□□□□ -1.11
RBM39-235ENST00000490354 ENAMQ9NRM1 1142 aa8.13□□□□□ -1.11
RBM39-235ENST00000490354 PCDHB11Q9Y5F2 797 aa8.12□□□□□ -1.11
RBM39-235ENST00000490354 H7C1W4 665 aa8.11□□□□□ -1.11
RBM39-235ENST00000490354 IGHA1P01876 353 aa8.11□□□□□ -1.11
RBM39-235ENST00000490354 NR1H3Q13133 447 aa8.11□□□□□ -1.11
RBM39-235ENST00000490354 CLN3Q13286 438 aa8.11□□□□□ -1.11
RBM39-235ENST00000490354 NBPF10Q6P3W6 841 aaKnown RBP8.11□□□□□ -1.11
RBM39-235ENST00000490354 CYP2U1Q7Z449 544 aa8.11□□□□□ -1.11
RBM39-235ENST00000490354 NBPF15Q8N660 670 aa8.11□□□□□ -1.11
RBM39-235ENST00000490354 IL27Q8NEV9 243 aa8.11□□□□□ -1.11
RBM39-235ENST00000490354 BCANQ96GW7 911 aa8.11□□□□□ -1.11
RBM39-235ENST00000490354 OSBPL3Q9H4L5 887 aa8.11□□□□□ -1.11
RBM39-235ENST00000490354 ARHGEF10LQ9HCE6 1279 aa8.11□□□□□ -1.11
RBM39-235ENST00000490354 CNTNAP5Q8WYK1 1306 aa8.1□□□□□ -1.11
RBM39-235ENST00000490354 BCRP11274 1271 aa8.1□□□□□ -1.11
RBM39-235ENST00000490354 FOXK2Q01167 660 aa8.1□□□□□ -1.11
RBM39-235ENST00000490354 SPATA31C2B4DYI2 1134 aa8.09□□□□□ -1.11
RBM39-235ENST00000490354 TRAK2O60296 914 aa8.09□□□□□ -1.11
RBM39-235ENST00000490354 GPR37L1O60883 481 aa8.09□□□□□ -1.11
RBM39-235ENST00000490354 MCCD1P59942 119 aaPredicted RBP8.09□□□□□ -1.11
RBM39-235ENST00000490354 NEUROD2Q15784 382 aa8.09□□□□□ -1.11
RBM39-235ENST00000490354 NEDD1Q8NHV4 660 aa8.09□□□□□ -1.11
RBM39-235ENST00000490354 ACDQ96AP0 544 aa8.09□□□□□ -1.11
RBM39-235ENST00000490354 TRERF1Q96PN7 1200 aa8.09□□□□□ -1.11
RBM39-235ENST00000490354 SCRIBQ14160 1630 aa8.08□□□□□ -1.12
RBM39-235ENST00000490354 TIMMDC1Q9NPL8 285 aa8.08□□□□□ -1.12
RBM39-235ENST00000490354 RAB6BQ9NRW1 208 aa8.08□□□□□ -1.12
RBM39-235ENST00000490354 PHF20L1A8MW92 1017 aa8.07□□□□□ -1.12
RBM39-235ENST00000490354 WASLO00401 505 aaPredicted RBP8.07□□□□□ -1.12
RBM39-235ENST00000490354 MX2P20592 715 aa8.07□□□□□ -1.12
RBM39-235ENST00000490354 WDR44Q5JSH3 913 aa8.07□□□□□ -1.12
RBM39-235ENST00000490354 TAS1R3Q7RTX0 852 aa8.07□□□□□ -1.12
RBM39-235ENST00000490354 NUCKS1Q9H1E3 243 aaKnown RBP8.07□□□□□ -1.12
RBM39-235ENST00000490354 ZNF330Q9Y3S2 320 aaPredicted RBP8.07□□□□□ -1.12
RBM39-235ENST00000490354 F11P03951 625 aa8.06□□□□□ -1.12
RBM39-235ENST00000490354 PLA2G4EQ3MJ16 856 aa8.06□□□□□ -1.12
RBM39-235ENST00000490354 ZNF592Q92610 1267 aa8.06□□□□□ -1.12
RBM39-235ENST00000490354 DCAF5Q96JK2 942 aa8.06□□□□□ -1.12
RBM39-235ENST00000490354 ESF1Q9H501 851 aaKnown RBP8.06□□□□□ -1.12
RBM39-235ENST00000490354 THBS1P07996 1170 aa8.05□□□□□ -1.12
RBM39-235ENST00000490354 BEND7Q8N7W2 519 aaPredicted RBP8.05□□□□□ -1.12
RBM39-235ENST00000490354 MTMR14Q8NCE2 650 aa8.05□□□□□ -1.12
RBM39-235ENST00000490354 IL2RAP01589 272 aa8.04□□□□□ -1.12
RBM39-235ENST00000490354 ITGB2P05107 769 aa8.04□□□□□ -1.12
RBM39-235ENST00000490354 PHKA2P46019 1235 aa8.04□□□□□ -1.12
RBM39-235ENST00000490354 CENPCQ03188 943 aa8.04□□□□□ -1.12
RBM39-235ENST00000490354 PODNQ7Z5L7 613 aa8.04□□□□□ -1.12
RBM39-235ENST00000490354 BANK1Q8NDB2 785 aa8.04□□□□□ -1.12
RBM39-235ENST00000490354 CNKSR1Q969H4 720 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms