RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
TRAIP-210ENST00000489948 TCP11L2Q8N4U5 519 aa17.65■□□□□ 0.42
TRAIP-210ENST00000489948 RAPGEF4Q8WZA2 1011 aa17.65■□□□□ 0.42
TRAIP-210ENST00000489948 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
TRAIP-210ENST00000489948 USP21Q9UK80 565 aa17.65■□□□□ 0.42
TRAIP-210ENST00000489948 TNS2Q63HR2 1409 aa17.64■□□□□ 0.42
TRAIP-210ENST00000489948 APAF1O14727 1248 aa17.64■□□□□ 0.41
TRAIP-210ENST00000489948 HNRNPUQ00839 825 aaKnown RBP eCLIP17.64■□□□□ 0.41
TRAIP-210ENST00000489948 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
TRAIP-210ENST00000489948 CCDC27Q2M243 656 aa17.64■□□□□ 0.41
TRAIP-210ENST00000489948 AMOTQ4VCS5 1084 aa17.64■□□□□ 0.41
TRAIP-210ENST00000489948 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
TRAIP-210ENST00000489948 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
TRAIP-210ENST00000489948 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
TRAIP-210ENST00000489948 IL2RBP14784 551 aa17.63■□□□□ 0.41
TRAIP-210ENST00000489948 TATP17735 454 aaPredicted RBP17.63■□□□□ 0.41
TRAIP-210ENST00000489948 TMPOP42166 694 aaKnown RBP17.63■□□□□ 0.41
TRAIP-210ENST00000489948 BARGINQ6ZT62 677 aa17.63■□□□□ 0.41
TRAIP-210ENST00000489948 CDCA7Q9BWT1 371 aaPredicted RBP17.63■□□□□ 0.41
TRAIP-210ENST00000489948 ZNF521Q96K83 1311 aa17.61■□□□□ 0.41
TRAIP-210ENST00000489948 LMOD3Q0VAK6 560 aa17.6■□□□□ 0.41
TRAIP-210ENST00000489948 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
TRAIP-210ENST00000489948 PLEKHO1Q53GL0 409 aaPredicted RBP17.6■□□□□ 0.41
TRAIP-210ENST00000489948 TRPC5Q9UL62 973 aaPredicted RBP17.6■□□□□ 0.41
TRAIP-210ENST00000489948 MAP3K5Q99683 1374 aa17.6■□□□□ 0.41
TRAIP-210ENST00000489948 SCN11AQ9UI33 1791 aa17.59■□□□□ 0.41
TRAIP-210ENST00000489948 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
TRAIP-210ENST00000489948 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
TRAIP-210ENST00000489948 HTATSF1O43719 755 aaKnown RBP17.58■□□□□ 0.4
TRAIP-210ENST00000489948 ZNF772Q68DY9 489 aaPredicted RBP17.58■□□□□ 0.4
TRAIP-210ENST00000489948 SPG7Q9UQ90 795 aa17.58■□□□□ 0.4
TRAIP-210ENST00000489948 MRC1P22897 1456 aa17.57■□□□□ 0.4
TRAIP-210ENST00000489948 YTHDC1Q96MU7 727 aaKnown RBP17.57■□□□□ 0.4
TRAIP-210ENST00000489948 SIPA1L3O60292 1781 aaPredicted RBP17.56■□□□□ 0.4
TRAIP-210ENST00000489948 RIPK4P57078 832 aa17.56■□□□□ 0.4
TRAIP-210ENST00000489948 AKAP4Q5JQC9 854 aa17.56■□□□□ 0.4
TRAIP-210ENST00000489948 GJD4Q96KN9 370 aaPredicted RBP17.56■□□□□ 0.4
TRAIP-210ENST00000489948 USP35Q9P2H5 1018 aa17.56■□□□□ 0.4
TRAIP-210ENST00000489948 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
TRAIP-210ENST00000489948 CEMIPQ8WUJ3 1361 aa17.55■□□□□ 0.4
TRAIP-210ENST00000489948 ZNF530Q6P9A1 599 aaPredicted RBP17.55■□□□□ 0.4
TRAIP-210ENST00000489948 WWC1Q8IX03 1113 aa17.55■□□□□ 0.4
TRAIP-210ENST00000489948 ZCRB1Q8TBF4 217 aaKnown RBP17.55■□□□□ 0.4
TRAIP-210ENST00000489948 RRP7AQ9Y3A4 280 aaKnown RBP17.55■□□□□ 0.4
TRAIP-210ENST00000489948 CCDC9Q9Y3X0 531 aaKnown RBP17.55■□□□□ 0.4
TRAIP-210ENST00000489948 GNAT3A8MTJ3 354 aa17.54■□□□□ 0.4
TRAIP-210ENST00000489948 TOGARAM1Q9Y4F4 1720 aa17.54■□□□□ 0.4
TRAIP-210ENST00000489948 KDM6AO15550 1401 aaPredicted RBP17.54■□□□□ 0.4
TRAIP-210ENST00000489948 IL16Q14005 1332 aa17.53■□□□□ 0.4
TRAIP-210ENST00000489948 ONECUT3O60422 494 aaPredicted RBP17.53■□□□□ 0.4
TRAIP-210ENST00000489948 PHKG2P15735 406 aa17.53■□□□□ 0.4
TRAIP-210ENST00000489948 PDE3BQ13370 1112 aa17.53■□□□□ 0.4
TRAIP-210ENST00000489948 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
TRAIP-210ENST00000489948 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
TRAIP-210ENST00000489948 IFNL2Q8IZJ0 200 aa17.53■□□□□ 0.4
TRAIP-210ENST00000489948 CYP27B1O15528 508 aa17.52■□□□□ 0.4
TRAIP-210ENST00000489948 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.4
TRAIP-210ENST00000489948 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
TRAIP-210ENST00000489948 NKX1-1Q15270 411 aaPredicted RBP17.51■□□□□ 0.39
TRAIP-210ENST00000489948 NEUROD2Q15784 382 aa17.51■□□□□ 0.39
TRAIP-210ENST00000489948 RTF1Q92541 710 aaKnown RBP17.51■□□□□ 0.39
TRAIP-210ENST00000489948 QTRT2Q9H974 415 aaKnown RBP17.51■□□□□ 0.39
TRAIP-210ENST00000489948 FAM98CQ17RN3 349 aaKnown RBP17.5■□□□□ 0.39
TRAIP-210ENST00000489948 KDM3BQ7LBC6 1761 aa17.5■□□□□ 0.39
TRAIP-210ENST00000489948 DOT1LQ8TEK3 1739 aa17.5■□□□□ 0.39
TRAIP-210ENST00000489948 BCL9O00512 1426 aa17.49■□□□□ 0.39
TRAIP-210ENST00000489948 EXOC5O00471 708 aa17.49■□□□□ 0.39
TRAIP-210ENST00000489948 DDB1Q16531 1140 aa17.49■□□□□ 0.39
TRAIP-210ENST00000489948 PAPPAQ13219 1627 aa17.49■□□□□ 0.39
TRAIP-210ENST00000489948 RBM6P78332 1123 aaKnown RBP17.48■□□□□ 0.39
TRAIP-210ENST00000489948 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
TRAIP-210ENST00000489948 DCAF5Q96JK2 942 aa17.48■□□□□ 0.39
TRAIP-210ENST00000489948 SALL2Q9Y467 1007 aaPredicted RBP17.48■□□□□ 0.39
TRAIP-210ENST00000489948 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
TRAIP-210ENST00000489948 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
TRAIP-210ENST00000489948 E9PSI1 815 aa17.47■□□□□ 0.39
TRAIP-210ENST00000489948 RGS17Q9UGC6 210 aaPredicted RBP17.47■□□□□ 0.39
TRAIP-210ENST00000489948 ITGB4P16144 1822 aa17.47■□□□□ 0.39
TRAIP-210ENST00000489948 RNMTO43148 476 aaKnown RBP17.46■□□□□ 0.39
TRAIP-210ENST00000489948 MCM10Q7L590 875 aa17.46■□□□□ 0.39
TRAIP-210ENST00000489948 IL17REQ8NFR9 667 aa17.46■□□□□ 0.39
TRAIP-210ENST00000489948 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
TRAIP-210ENST00000489948 BABAM1Q9NWV8 329 aa17.46■□□□□ 0.39
TRAIP-210ENST00000489948 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
TRAIP-210ENST00000489948 TRMT2AQ8IZ69 625 aaKnown RBP17.45■□□□□ 0.38
TRAIP-210ENST00000489948 NHSQ6T4R5 1651 aa17.45■□□□□ 0.38
TRAIP-210ENST00000489948 SLFN5Q08AF3 891 aa17.44■□□□□ 0.38
TRAIP-210ENST00000489948 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
TRAIP-210ENST00000489948 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
TRAIP-210ENST00000489948 EP400Q96L91 3159 aa17.44■□□□□ 0.38
TRAIP-210ENST00000489948 UBR2Q8IWV8 1755 aa17.43■□□□□ 0.38
TRAIP-210ENST00000489948 ERVV-2B6SEH9 535 aa17.43■□□□□ 0.38
TRAIP-210ENST00000489948 GNAI1P63096 354 aa17.43■□□□□ 0.38
TRAIP-210ENST00000489948 MPRIPQ6WCQ1 1025 aa17.43■□□□□ 0.38
TRAIP-210ENST00000489948 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
TRAIP-210ENST00000489948 RGS12O14924 1447 aa17.43■□□□□ 0.38
TRAIP-210ENST00000489948 SBF2Q86WG5 1849 aa17.42■□□□□ 0.38
TRAIP-210ENST00000489948 SEPT12Q8IYM1 358 aa17.42■□□□□ 0.38
TRAIP-210ENST00000489948 MARCH10Q8NA82 808 aaPredicted RBP17.42■□□□□ 0.38
TRAIP-210ENST00000489948 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms