RNA–Protein interactions for RNA: ENST00000489556.5

CNIH3-209, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 5

Gene CNIH3, Length 866 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-209ENST00000489556 MAPK8IP3Q9UPT6 1336 aa11.41□□□□□ -0.58
CNIH3-209ENST00000489556 AEBP1Q8IUX7 1158 aa11.41□□□□□ -0.58
CNIH3-209ENST00000489556 CDCA7Q9BWT1 371 aaPredicted RBP11.41□□□□□ -0.58
CNIH3-209ENST00000489556 ADAMTS8Q9UP79 889 aa11.41□□□□□ -0.58
CNIH3-209ENST00000489556 IGSF1Q8N6C5 1336 aa11.4□□□□□ -0.58
CNIH3-209ENST00000489556 COL3A1P02461 1466 aaPredicted RBP11.4□□□□□ -0.58
CNIH3-209ENST00000489556 EXOC5O00471 708 aa11.4□□□□□ -0.58
CNIH3-209ENST00000489556 FCHSD2O94868 740 aa11.4□□□□□ -0.58
CNIH3-209ENST00000489556 PRKAR2BP31323 418 aa11.4□□□□□ -0.58
CNIH3-209ENST00000489556 PDE3BQ13370 1112 aa11.4□□□□□ -0.58
CNIH3-209ENST00000489556 PLEKHO1Q53GL0 409 aaPredicted RBP11.4□□□□□ -0.58
CNIH3-209ENST00000489556 CCDC146Q8IYE0 955 aa11.4□□□□□ -0.58
CNIH3-209ENST00000489556 SPINK5Q9NQ38 1064 aaPredicted RBP11.4□□□□□ -0.58
CNIH3-209ENST00000489556 SPG7Q9UQ90 795 aa11.4□□□□□ -0.58
CNIH3-209ENST00000489556 ATRNO75882 1429 aa11.4□□□□□ -0.58
CNIH3-209ENST00000489556 DDB1Q16531 1140 aa11.39□□□□□ -0.59
CNIH3-209ENST00000489556 POTEAQ6S8J7 498 aa11.39□□□□□ -0.59
CNIH3-209ENST00000489556 BARGINQ6ZT62 677 aa11.39□□□□□ -0.59
CNIH3-209ENST00000489556 DDX54Q8TDD1 881 aaKnown RBP11.39□□□□□ -0.59
CNIH3-209ENST00000489556 PNISRQ8TF01 805 aaKnown RBP11.39□□□□□ -0.59
CNIH3-209ENST00000489556 SEPT12Q8IYM1 358 aa11.38□□□□□ -0.59
CNIH3-209ENST00000489556 ZCRB1Q8TBF4 217 aaKnown RBP11.38□□□□□ -0.59
CNIH3-209ENST00000489556 RGS17Q9UGC6 210 aaPredicted RBP11.38□□□□□ -0.59
CNIH3-209ENST00000489556 DSG3P32926 999 aa11.37□□□□□ -0.59
CNIH3-209ENST00000489556 AMOTQ4VCS5 1084 aa11.37□□□□□ -0.59
CNIH3-209ENST00000489556 C1orf141Q5JVX7 400 aa11.37□□□□□ -0.59
CNIH3-209ENST00000489556 RUNDC1Q96C34 613 aa11.37□□□□□ -0.59
CNIH3-209ENST00000489556 RSPH6AQ9H0K4 717 aa11.37□□□□□ -0.59
CNIH3-209ENST00000489556 RGPD1P0DJD0 1748 aa11.36□□□□□ -0.59
CNIH3-209ENST00000489556 PARP4Q9UKK3 1724 aaKnown RBP11.36□□□□□ -0.59
CNIH3-209ENST00000489556 NEUROD2Q15784 382 aa11.36□□□□□ -0.59
CNIH3-209ENST00000489556 SENP3-EIF4A1A0A087X0R7 540 aa11.35□□□□□ -0.59
CNIH3-209ENST00000489556 ZNF530Q6P9A1 599 aaPredicted RBP11.35□□□□□ -0.59
CNIH3-209ENST00000489556 GAS2L2Q8NHY3 880 aa11.35□□□□□ -0.59
CNIH3-209ENST00000489556 GLI3P10071 1580 aa11.35□□□□□ -0.59
CNIH3-209ENST00000489556 KDRP35968 1356 aa11.34□□□□□ -0.59
CNIH3-209ENST00000489556 POTEHQ6S545 545 aa11.34□□□□□ -0.59
CNIH3-209ENST00000489556 IFNL2Q8IZJ0 200 aa11.34□□□□□ -0.59
CNIH3-209ENST00000489556 RTF1Q92541 710 aaKnown RBP11.34□□□□□ -0.59
CNIH3-209ENST00000489556 PHACTR3Q96KR7 559 aa11.34□□□□□ -0.59
CNIH3-209ENST00000489556 SALL2Q9Y467 1007 aaPredicted RBP11.34□□□□□ -0.59
CNIH3-209ENST00000489556 MEGF6O75095 1541 aa11.34□□□□□ -0.59
CNIH3-209ENST00000489556 PCDH11XQ9BZA7 1347 aa11.34□□□□□ -0.59
CNIH3-209ENST00000489556 PCDH11YQ9BZA8 1340 aa11.34□□□□□ -0.59
CNIH3-209ENST00000489556 APAF1O14727 1248 aa11.33□□□□□ -0.6
CNIH3-209ENST00000489556 HSP90AB1P08238 724 aaKnown RBP11.33□□□□□ -0.6
CNIH3-209ENST00000489556 RIPK4P57078 832 aa11.33□□□□□ -0.6
CNIH3-209ENST00000489556 MTHFSDQ2M296 383 aaKnown RBP11.33□□□□□ -0.6
CNIH3-209ENST00000489556 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.6
CNIH3-209ENST00000489556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
CNIH3-209ENST00000489556 RRP7AQ9Y3A4 280 aaKnown RBP11.33□□□□□ -0.6
CNIH3-209ENST00000489556 OVOS2A0A0G2JMS6 1433 aa11.33□□□□□ -0.6
CNIH3-209ENST00000489556 WNK3Q9BYP7 1800 aa11.32□□□□□ -0.6
CNIH3-209ENST00000489556 ONECUT3O60422 494 aaPredicted RBP11.32□□□□□ -0.6
CNIH3-209ENST00000489556 PLEKHF1Q96S99 279 aa11.32□□□□□ -0.6
CNIH3-209ENST00000489556 GNAT3A8MTJ3 354 aa11.31□□□□□ -0.6
CNIH3-209ENST00000489556 CAPN15O75808 1086 aa11.31□□□□□ -0.6
CNIH3-209ENST00000489556 LMOD3Q0VAK6 560 aa11.31□□□□□ -0.6
CNIH3-209ENST00000489556 NFE2L2Q16236 605 aa11.31□□□□□ -0.6
CNIH3-209ENST00000489556 AKAP4Q5JQC9 854 aa11.31□□□□□ -0.6
CNIH3-209ENST00000489556 SYTL4Q96C24 671 aaPredicted RBP11.31□□□□□ -0.6
CNIH3-209ENST00000489556 DISP2A7MBM2 1401 aa11.3□□□□□ -0.6
CNIH3-209ENST00000489556 NCAPD2Q15021 1401 aa11.3□□□□□ -0.6
CNIH3-209ENST00000489556 PHKG2P15735 406 aa11.3□□□□□ -0.6
CNIH3-209ENST00000489556 TMPOP42166 694 aaKnown RBP11.3□□□□□ -0.6
CNIH3-209ENST00000489556 FAM182BQ5T319 152 aa11.3□□□□□ -0.6
CNIH3-209ENST00000489556 MPRIPQ6WCQ1 1025 aa11.3□□□□□ -0.6
CNIH3-209ENST00000489556 YTHDC1Q96MU7 727 aaKnown RBP11.3□□□□□ -0.6
CNIH3-209ENST00000489556 TNS2Q63HR2 1409 aa11.29□□□□□ -0.6
CNIH3-209ENST00000489556 LRRC37A3O60309 1634 aa11.29□□□□□ -0.6
CNIH3-209ENST00000489556 CYP27B1O15528 508 aa11.29□□□□□ -0.6
CNIH3-209ENST00000489556 HNRNPUQ00839 825 aaKnown RBP eCLIP11.29□□□□□ -0.6
CNIH3-209ENST00000489556 ACSBG1Q96GR2 724 aa11.29□□□□□ -0.6
CNIH3-209ENST00000489556 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
CNIH3-209ENST00000489556 BRWD3Q6RI45 1802 aa11.28□□□□□ -0.6
CNIH3-209ENST00000489556 THSD7AQ9UPZ6 1657 aa11.28□□□□□ -0.6
CNIH3-209ENST00000489556 CABP4P57796 275 aa11.28□□□□□ -0.6
CNIH3-209ENST00000489556 TEFQ10587 303 aa11.28□□□□□ -0.6
CNIH3-209ENST00000489556 FAM196AQ6ZSG2 479 aa11.28□□□□□ -0.6
CNIH3-209ENST00000489556 MARCH10Q8NA82 808 aaPredicted RBP11.28□□□□□ -0.6
CNIH3-209ENST00000489556 DCAF5Q96JK2 942 aa11.28□□□□□ -0.6
CNIH3-209ENST00000489556 LAS1LQ9Y4W2 734 aaKnown RBP11.28□□□□□ -0.6
CNIH3-209ENST00000489556 PLEKHG2Q9H7P9 1386 aa11.28□□□□□ -0.6
CNIH3-209ENST00000489556 RGS12O14924 1447 aa11.27□□□□□ -0.6
CNIH3-209ENST00000489556 PKD1L3Q7Z443 1732 aa11.27□□□□□ -0.61
CNIH3-209ENST00000489556 HTATSF1O43719 755 aaKnown RBP11.27□□□□□ -0.61
CNIH3-209ENST00000489556 MCM10Q7L590 875 aa11.27□□□□□ -0.61
CNIH3-209ENST00000489556 KAT6BQ8WYB5 2073 aa11.27□□□□□ -0.61
CNIH3-209ENST00000489556 RNMTO43148 476 aaKnown RBP11.26□□□□□ -0.61
CNIH3-209ENST00000489556 CALD1Q05682 793 aaKnown RBP11.26□□□□□ -0.61
CNIH3-209ENST00000489556 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
CNIH3-209ENST00000489556 LGR6Q9HBX8 967 aa11.26□□□□□ -0.61
CNIH3-209ENST00000489556 DLG5Q8TDM6 1919 aa11.25□□□□□ -0.61
CNIH3-209ENST00000489556 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
CNIH3-209ENST00000489556 SF3B2Q13435 895 aaKnown RBP11.25□□□□□ -0.61
CNIH3-209ENST00000489556 THUMPD2Q9BTF0 503 aaKnown RBP11.25□□□□□ -0.61
CNIH3-209ENST00000489556 TMOD3Q9NYL9 352 aa11.25□□□□□ -0.61
CNIH3-209ENST00000489556 SHANK3Q9BYB0 1731 aa11.24□□□□□ -0.61
CNIH3-209ENST00000489556 TRIM37O94972 964 aa11.24□□□□□ -0.61
CNIH3-209ENST00000489556 NKX1-1Q15270 411 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms