RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 U3KPZ7 1027 aaPredicted RBP20.82■□□□□ 0.92
SMIM11A-206ENST00000489469 RAPGEF4Q8WZA2 1011 aa20.81■□□□□ 0.92
SMIM11A-206ENST00000489469 PLEKHG2Q9H7P9 1386 aa20.81■□□□□ 0.92
SMIM11A-206ENST00000489469 ANP32CO43423 234 aa20.8■□□□□ 0.92
SMIM11A-206ENST00000489469 DDB1Q16531 1140 aa20.8■□□□□ 0.92
SMIM11A-206ENST00000489469 KRT27Q7Z3Y8 459 aa20.8■□□□□ 0.92
SMIM11A-206ENST00000489469 EXOC5O00471 708 aa20.79■□□□□ 0.92
SMIM11A-206ENST00000489469 TATP17735 454 aaPredicted RBP20.79■□□□□ 0.92
SMIM11A-206ENST00000489469 C1QBPQ07021 282 aaKnown RBP20.79■□□□□ 0.92
SMIM11A-206ENST00000489469 PDE3BQ13370 1112 aa20.79■□□□□ 0.92
SMIM11A-206ENST00000489469 USHBP1Q8N6Y0 703 aa20.79■□□□□ 0.92
SMIM11A-206ENST00000489469 NUDCQ9Y266 331 aa20.79■□□□□ 0.92
SMIM11A-206ENST00000489469 TNS2Q63HR2 1409 aa20.78■□□□□ 0.92
SMIM11A-206ENST00000489469 MEGF6O75095 1541 aa20.77■□□□□ 0.92
SMIM11A-206ENST00000489469 OVOS2A0A0G2JMS6 1433 aa20.77■□□□□ 0.91
SMIM11A-206ENST00000489469 PKD1L3Q7Z443 1732 aa20.76■□□□□ 0.91
SMIM11A-206ENST00000489469 KDRP35968 1356 aa20.76■□□□□ 0.91
SMIM11A-206ENST00000489469 SULT6B1Q6IMI4 303 aa20.74■□□□□ 0.91
SMIM11A-206ENST00000489469 SHANK3Q9BYB0 1731 aa20.73■□□□□ 0.91
SMIM11A-206ENST00000489469 KAT6BQ8WYB5 2073 aa20.73■□□□□ 0.91
SMIM11A-206ENST00000489469 U2SURPO15042 1029 aaKnown RBP20.73■□□□□ 0.91
SMIM11A-206ENST00000489469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.73■□□□□ 0.91
SMIM11A-206ENST00000489469 ZCRB1Q8TBF4 217 aaKnown RBP20.72■□□□□ 0.91
SMIM11A-206ENST00000489469 SPG7Q9UQ90 795 aa20.71■□□□□ 0.91
SMIM11A-206ENST00000489469 FAM196AQ6ZSG2 479 aa20.7■□□□□ 0.9
SMIM11A-206ENST00000489469 PCDH11XQ9BZA7 1347 aa20.7■□□□□ 0.9
SMIM11A-206ENST00000489469 PCDH11YQ9BZA8 1340 aa20.7■□□□□ 0.9
SMIM11A-206ENST00000489469 BCL9O00512 1426 aa20.7■□□□□ 0.9
SMIM11A-206ENST00000489469 SBF2Q86WG5 1849 aa20.69■□□□□ 0.9
SMIM11A-206ENST00000489469 AEBP1Q8IUX7 1158 aa20.69■□□□□ 0.9
SMIM11A-206ENST00000489469 ZBTB22O15209 634 aa20.68■□□□□ 0.9
SMIM11A-206ENST00000489469 MYCNP04198 464 aaPredicted RBP20.68■□□□□ 0.9
SMIM11A-206ENST00000489469 HMOX1P09601 288 aa20.68■□□□□ 0.9
SMIM11A-206ENST00000489469 U2AF1L5P0DN76 240 aaPredicted RBP20.68■□□□□ 0.9
SMIM11A-206ENST00000489469 U2AF1Q01081 240 aaKnown RBP eCLIP20.68■□□□□ 0.9
SMIM11A-206ENST00000489469 AMOTQ4VCS5 1084 aa20.68■□□□□ 0.9
SMIM11A-206ENST00000489469 PLEKHO1Q53GL0 409 aaPredicted RBP20.68■□□□□ 0.9
SMIM11A-206ENST00000489469 MARCH10Q8NA82 808 aaPredicted RBP20.68■□□□□ 0.9
SMIM11A-206ENST00000489469 FCHSD2O94868 740 aa20.66■□□□□ 0.9
SMIM11A-206ENST00000489469 CACNB1Q02641 598 aaPredicted RBP20.66■□□□□ 0.9
SMIM11A-206ENST00000489469 DDX54Q8TDD1 881 aaKnown RBP20.65■□□□□ 0.9
SMIM11A-206ENST00000489469 PNNQ9H307 717 aaKnown RBP20.65■□□□□ 0.9
SMIM11A-206ENST00000489469 CCDC125Q86Z20 511 aa20.64■□□□□ 0.89
SMIM11A-206ENST00000489469 FAM182BQ5T319 152 aa20.63■□□□□ 0.89
SMIM11A-206ENST00000489469 EP400Q96L91 3159 aa20.62■□□□□ 0.89
SMIM11A-206ENST00000489469 NEFMP07197 916 aa20.62■□□□□ 0.89
SMIM11A-206ENST00000489469 WDR43Q15061 677 aaKnown RBP eCLIP20.62■□□□□ 0.89
SMIM11A-206ENST00000489469 DIEXFQ68CQ4 756 aaKnown RBP20.62■□□□□ 0.89
SMIM11A-206ENST00000489469 IFNL2Q8IZJ0 200 aa20.62■□□□□ 0.89
SMIM11A-206ENST00000489469 RSPH6AQ9H0K4 717 aa20.62■□□□□ 0.89
SMIM11A-206ENST00000489469 NHSQ6T4R5 1651 aa20.61■□□□□ 0.89
SMIM11A-206ENST00000489469 SOCS7O14512 581 aa20.61■□□□□ 0.89
SMIM11A-206ENST00000489469 CYP27B1O15528 508 aa20.61■□□□□ 0.89
SMIM11A-206ENST00000489469 DOT1LQ8TEK3 1739 aa20.61■□□□□ 0.89
SMIM11A-206ENST00000489469 VIRMAQ69YN4 1812 aaKnown RBP20.6■□□□□ 0.89
SMIM11A-206ENST00000489469 HSP90AB1P08238 724 aaKnown RBP20.6■□□□□ 0.89
SMIM11A-206ENST00000489469 PRKAR2BP31323 418 aa20.6■□□□□ 0.89
SMIM11A-206ENST00000489469 C1orf141Q5JVX7 400 aa20.6■□□□□ 0.89
SMIM11A-206ENST00000489469 ZNF530Q6P9A1 599 aaPredicted RBP20.6■□□□□ 0.89
SMIM11A-206ENST00000489469 TNS1Q9HBL0 1735 aaKnown RBP20.59■□□□□ 0.89
SMIM11A-206ENST00000489469 PHKG2P15735 406 aa20.59■□□□□ 0.89
SMIM11A-206ENST00000489469 SF3B2Q13435 895 aaKnown RBP20.59■□□□□ 0.89
SMIM11A-206ENST00000489469 NKX1-1Q15270 411 aaPredicted RBP20.59■□□□□ 0.89
SMIM11A-206ENST00000489469 GAS2L2Q8NHY3 880 aa20.59■□□□□ 0.89
SMIM11A-206ENST00000489469 UPF1Q92900 1129 aaKnown RBP eCLIP20.59■□□□□ 0.89
SMIM11A-206ENST00000489469 MRS2Q9HD23 443 aa20.58■□□□□ 0.89
SMIM11A-206ENST00000489469 ITGB4P16144 1822 aa20.57■□□□□ 0.88
SMIM11A-206ENST00000489469 SCN11AQ9UI33 1791 aa20.57■□□□□ 0.88
SMIM11A-206ENST00000489469 AKAP4Q5JQC9 854 aa20.56■□□□□ 0.88
SMIM11A-206ENST00000489469 BCL11BQ9C0K0 894 aaPredicted RBP20.56■□□□□ 0.88
SMIM11A-206ENST00000489469 TRIM37O94972 964 aa20.55■□□□□ 0.88
SMIM11A-206ENST00000489469 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
SMIM11A-206ENST00000489469 DCAF5Q96JK2 942 aa20.55■□□□□ 0.88
SMIM11A-206ENST00000489469 TOGARAM1Q9Y4F4 1720 aa20.55■□□□□ 0.88
SMIM11A-206ENST00000489469 MAPK8IP3Q9UPT6 1336 aa20.54■□□□□ 0.88
SMIM11A-206ENST00000489469 BTAF1O14981 1849 aa20.54■□□□□ 0.88
SMIM11A-206ENST00000489469 DLG5Q8TDM6 1919 aa20.54■□□□□ 0.88
SMIM11A-206ENST00000489469 SAMD1Q6SPF0 538 aaPredicted RBP20.53■□□□□ 0.88
SMIM11A-206ENST00000489469 PHACTR3Q96KR7 559 aa20.53■□□□□ 0.88
SMIM11A-206ENST00000489469 PLEKHF1Q96S99 279 aa20.53■□□□□ 0.88
SMIM11A-206ENST00000489469 RGPD3A6NKT7 1758 aaPredicted RBP20.53■□□□□ 0.88
SMIM11A-206ENST00000489469 RGPD4Q7Z3J3 1758 aa20.53■□□□□ 0.88
SMIM11A-206ENST00000489469 CCER2I3L3R5 266 aa20.52■□□□□ 0.88
SMIM11A-206ENST00000489469 CCDC184Q52MB2 194 aa20.52■□□□□ 0.88
SMIM11A-206ENST00000489469 ACSBG1Q96GR2 724 aa20.52■□□□□ 0.88
SMIM11A-206ENST00000489469 ADAMTS7Q9UKP4 1686 aa20.51■□□□□ 0.87
SMIM11A-206ENST00000489469 MAP3K5Q99683 1374 aa20.51■□□□□ 0.87
SMIM11A-206ENST00000489469 BAG6P46379 1132 aa20.51■□□□□ 0.87
SMIM11A-206ENST00000489469 ADAMTS8Q9UP79 889 aa20.51■□□□□ 0.87
SMIM11A-206ENST00000489469 GNAT3A8MTJ3 354 aa20.5■□□□□ 0.87
SMIM11A-206ENST00000489469 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
SMIM11A-206ENST00000489469 PNISRQ8TF01 805 aaKnown RBP20.5■□□□□ 0.87
SMIM11A-206ENST00000489469 SYTL4Q96C24 671 aaPredicted RBP20.5■□□□□ 0.87
SMIM11A-206ENST00000489469 APBA3O96018 575 aa20.49■□□□□ 0.87
SMIM11A-206ENST00000489469 PRIM1P49642 420 aaKnown RBP20.49■□□□□ 0.87
SMIM11A-206ENST00000489469 RUNDC1Q96C34 613 aa20.49■□□□□ 0.87
SMIM11A-206ENST00000489469 KDM6AO15550 1401 aaPredicted RBP20.49■□□□□ 0.87
SMIM11A-206ENST00000489469 KCNQ2O43526 872 aa20.48■□□□□ 0.87
SMIM11A-206ENST00000489469 HTATSF1O43719 755 aaKnown RBP20.47■□□□□ 0.87
SMIM11A-206ENST00000489469 NFE2L2Q16236 605 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms