RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 TSGA10IPQ3SY00 556 aa7.96□□□□□ -1.14
SSR1-209ENST00000488834 MRPL14Q6P1L8 145 aaKnown RBP7.96□□□□□ -1.14
SSR1-209ENST00000488834 TBC1D9Q6ZT07 1266 aa7.96□□□□□ -1.14
SSR1-209ENST00000488834 CYP2U1Q7Z449 544 aa7.96□□□□□ -1.14
SSR1-209ENST00000488834 LINC00528Q8N1L1 170 aa7.96□□□□□ -1.14
SSR1-209ENST00000488834 DEPDC4Q8N2C3 294 aa7.96□□□□□ -1.14
SSR1-209ENST00000488834 MEIOBQ8N635 442 aa7.96□□□□□ -1.14
SSR1-209ENST00000488834 ZFP42Q96MM3 310 aa7.96□□□□□ -1.14
SSR1-209ENST00000488834 TSEN34Q9BSV6 310 aaKnown RBP7.96□□□□□ -1.14
SSR1-209ENST00000488834 ATP9BO43861 1147 aa7.95□□□□□ -1.14
SSR1-209ENST00000488834 LILRA1O75019 489 aa7.95□□□□□ -1.14
SSR1-209ENST00000488834 ADH1AP07327 375 aa7.95□□□□□ -1.14
SSR1-209ENST00000488834 SCTRP47872 440 aa7.95□□□□□ -1.14
SSR1-209ENST00000488834 AGBL1Q96MI9 1066 aa7.95□□□□□ -1.14
SSR1-209ENST00000488834 UCN2Q96RP3 112 aa7.95□□□□□ -1.14
SSR1-209ENST00000488834 TFIP11Q9UBB9 837 aaKnown RBP7.95□□□□□ -1.14
SSR1-209ENST00000488834 PALM3A6NDB9 673 aaPredicted RBP7.94□□□□□ -1.14
SSR1-209ENST00000488834 ATP5J2-PTCD1G3V325 749 aa7.94□□□□□ -1.14
SSR1-209ENST00000488834 SUPT5HO00267 1087 aaKnown RBP7.94□□□□□ -1.14
SSR1-209ENST00000488834 LZTS3O60299 673 aaPredicted RBP7.94□□□□□ -1.14
SSR1-209ENST00000488834 ADD1P35611 737 aaKnown RBP7.94□□□□□ -1.14
SSR1-209ENST00000488834 PSME1Q06323 249 aa7.94□□□□□ -1.14
SSR1-209ENST00000488834 NCOA4Q13772 614 aa7.94□□□□□ -1.14
SSR1-209ENST00000488834 Q6ZVU0 165 aa7.94□□□□□ -1.14
SSR1-209ENST00000488834 PURBQ96QR8 312 aaKnown RBP7.94□□□□□ -1.14
SSR1-209ENST00000488834 PPP1R12CQ9BZL4 782 aa7.94□□□□□ -1.14
SSR1-209ENST00000488834 NOD1Q9Y239 953 aa7.94□□□□□ -1.14
SSR1-209ENST00000488834 USP17L3A6NCW0 530 aa7.93□□□□□ -1.14
SSR1-209ENST00000488834 USP17L4A6NCW7 530 aa7.93□□□□□ -1.14
SSR1-209ENST00000488834 NFX1Q12986 1120 aaKnown RBP7.93□□□□□ -1.14
SSR1-209ENST00000488834 USP17L2Q6R6M4 530 aa7.93□□□□□ -1.14
SSR1-209ENST00000488834 USP17L1Q7RTZ2 530 aa7.93□□□□□ -1.14
SSR1-209ENST00000488834 ZNF395Q9H8N7 513 aaPredicted RBP7.93□□□□□ -1.14
SSR1-209ENST00000488834 SENP2Q9HC62 589 aa7.93□□□□□ -1.14
SSR1-209ENST00000488834 CHIC2Q9UKJ5 165 aa7.93□□□□□ -1.14
SSR1-209ENST00000488834 LMOD1P29536 600 aaPredicted RBP7.92□□□□□ -1.14
SSR1-209ENST00000488834 SERPINA10Q9UK55 444 aa7.92□□□□□ -1.14
SSR1-209ENST00000488834 RFX1P22670 979 aa7.91□□□□□ -1.14
SSR1-209ENST00000488834 VEGFBP49765 207 aa7.91□□□□□ -1.14
SSR1-209ENST00000488834 TRIM50Q86XT4 487 aa7.91□□□□□ -1.14
SSR1-209ENST00000488834 OSBPL3Q9H4L5 887 aa7.91□□□□□ -1.14
SSR1-209ENST00000488834 POLMQ9NP87 494 aaPredicted RBP7.91□□□□□ -1.14
SSR1-209ENST00000488834 MAFBQ9Y5Q3 323 aaPredicted RBP7.91□□□□□ -1.14
SSR1-209ENST00000488834 MEN1O00255 615 aa7.9□□□□□ -1.14
SSR1-209ENST00000488834 PTGIRP43119 386 aa7.9□□□□□ -1.14
SSR1-209ENST00000488834 PLEKHM2Q8IWE5 1019 aa7.9□□□□□ -1.14
SSR1-209ENST00000488834 KDF1Q8NAX2 398 aaPredicted RBP7.9□□□□□ -1.14
SSR1-209ENST00000488834 KIFC2Q96AC6 838 aa7.9□□□□□ -1.14
SSR1-209ENST00000488834 NLRP3Q96P20 1036 aa7.9□□□□□ -1.14
SSR1-209ENST00000488834 ARHGEF10LQ9HCE6 1279 aa7.9□□□□□ -1.14
SSR1-209ENST00000488834 RBM19Q9Y4C8 960 aaKnown RBP7.9□□□□□ -1.14
SSR1-209ENST00000488834 GNRH1P01148 92 aa7.89□□□□□ -1.15
SSR1-209ENST00000488834 ATP1A2P50993 1020 aa7.89□□□□□ -1.15
SSR1-209ENST00000488834 GTF2IP78347 998 aa7.89□□□□□ -1.15
SSR1-209ENST00000488834 ESCO1Q5FWF5 840 aa7.89□□□□□ -1.15
SSR1-209ENST00000488834 INSM2Q96T92 566 aaPredicted RBP7.89□□□□□ -1.15
SSR1-209ENST00000488834 RAB6BQ9NRW1 208 aa7.89□□□□□ -1.15
SSR1-209ENST00000488834 MKRN1Q9UHC7 482 aaKnown RBP7.89□□□□□ -1.15
SSR1-209ENST00000488834 A0A1W2PRU2 124 aa7.88□□□□□ -1.15
SSR1-209ENST00000488834 SPINT1O43278 529 aa7.88□□□□□ -1.15
SSR1-209ENST00000488834 MAN1A2O60476 641 aa7.88□□□□□ -1.15
SSR1-209ENST00000488834 CCDC82Q8N4S0 544 aa7.88□□□□□ -1.15
SSR1-209ENST00000488834 LARP1Q6PKG0 1096 aaKnown RBP7.87□□□□□ -1.15
SSR1-209ENST00000488834 TREML4Q6UXN2 200 aa7.87□□□□□ -1.15
SSR1-209ENST00000488834 TTLL8A6PVC2 850 aa7.86□□□□□ -1.15
SSR1-209ENST00000488834 RASA1P20936 1047 aa7.86□□□□□ -1.15
SSR1-209ENST00000488834 GTF2E1P29083 439 aaPredicted RBP7.86□□□□□ -1.15
SSR1-209ENST00000488834 SLC27A3Q5K4L6 730 aa7.86□□□□□ -1.15
SSR1-209ENST00000488834 ARID3AQ99856 593 aa7.86□□□□□ -1.15
SSR1-209ENST00000488834 VRTNQ9H8Y1 702 aa7.86□□□□□ -1.15
SSR1-209ENST00000488834 DNAAF2Q9NVR5 837 aaKnown RBP7.86□□□□□ -1.15
SSR1-209ENST00000488834 DNMT3LQ9UJW3 386 aa7.86□□□□□ -1.15
SSR1-209ENST00000488834 FIGNL2A6NMB9 653 aa7.85□□□□□ -1.15
SSR1-209ENST00000488834 CLN3Q13286 438 aa7.85□□□□□ -1.15
SSR1-209ENST00000488834 CFAP70Q5T0N1 1121 aa7.85□□□□□ -1.15
SSR1-209ENST00000488834 OGFOD1Q8N543 542 aa7.85□□□□□ -1.15
SSR1-209ENST00000488834 CNKSR1Q969H4 720 aa7.85□□□□□ -1.15
SSR1-209ENST00000488834 ZNF594Q96JF6 807 aaPredicted RBP7.85□□□□□ -1.15
SSR1-209ENST00000488834 C1orf115Q9H7X2 142 aa7.85□□□□□ -1.15
SSR1-209ENST00000488834 ERBB4Q15303 1308 aa7.84□□□□□ -1.15
SSR1-209ENST00000488834 TERTO14746 1132 aaKnown RBP7.84□□□□□ -1.15
SSR1-209ENST00000488834 CTSOP43234 321 aaPredicted RBP7.84□□□□□ -1.15
SSR1-209ENST00000488834 GDF10P55107 478 aa7.84□□□□□ -1.15
SSR1-209ENST00000488834 CDCA8Q53HL2 280 aa7.84□□□□□ -1.15
SSR1-209ENST00000488834 TPCN2Q8NHX9 752 aa7.84□□□□□ -1.15
SSR1-209ENST00000488834 SOS2Q07890 1332 aaPredicted RBP7.83□□□□□ -1.16
SSR1-209ENST00000488834 STAU1O95793 577 aaKnown RBP7.83□□□□□ -1.16
SSR1-209ENST00000488834 ESYT1Q9BSJ8 1104 aa7.83□□□□□ -1.16
SSR1-209ENST00000488834 ETNK1Q9HBU6 452 aa7.83□□□□□ -1.16
SSR1-209ENST00000488834 SERTAD1Q9UHV2 236 aa7.83□□□□□ -1.16
SSR1-209ENST00000488834 PCDHGA11Q9Y5H2 935 aa7.83□□□□□ -1.16
SSR1-209ENST00000488834 BACH1O14867 736 aa7.82□□□□□ -1.16
SSR1-209ENST00000488834 WFS1O76024 890 aa7.82□□□□□ -1.16
SSR1-209ENST00000488834 INHAP05111 366 aa7.82□□□□□ -1.16
SSR1-209ENST00000488834 CLDN10P78369 228 aa7.82□□□□□ -1.16
SSR1-209ENST00000488834 TLR1Q15399 786 aa7.82□□□□□ -1.16
SSR1-209ENST00000488834 CCDC102BQ68D86 513 aa7.82□□□□□ -1.16
SSR1-209ENST00000488834 LARGE2Q8N3Y3 721 aa7.82□□□□□ -1.16
SSR1-209ENST00000488834 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.81□□□□□ -1.16
SSR1-209ENST00000488834 IL2RAP01589 272 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms