RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 PLPP7Q8NBV4 271 aa9.93□□□□□ -0.82
VPS8-224ENST00000488255 TRIM52Q96A61 297 aa9.93□□□□□ -0.82
VPS8-224ENST00000488255 POLMQ9NP87 494 aaPredicted RBP9.93□□□□□ -0.82
VPS8-224ENST00000488255 ZNF777Q9ULD5 760 aaPredicted RBP9.92□□□□□ -0.82
VPS8-224ENST00000488255 MEN1O00255 615 aa9.91□□□□□ -0.82
VPS8-224ENST00000488255 SPINT1O43278 529 aa9.91□□□□□ -0.82
VPS8-224ENST00000488255 CTSOP43234 321 aaPredicted RBP9.91□□□□□ -0.82
VPS8-224ENST00000488255 KDF1Q8NAX2 398 aaPredicted RBP9.91□□□□□ -0.82
VPS8-224ENST00000488255 GLMNQ92990 594 aa9.91□□□□□ -0.82
VPS8-224ENST00000488255 OSBPL3Q9H4L5 887 aa9.91□□□□□ -0.82
VPS8-224ENST00000488255 TTLL8A6PVC2 850 aa9.9□□□□□ -0.82
VPS8-224ENST00000488255 RAB6BQ9NRW1 208 aa9.9□□□□□ -0.82
VPS8-224ENST00000488255 SOS2Q07890 1332 aaPredicted RBP9.89□□□□□ -0.83
VPS8-224ENST00000488255 TRAK2O60296 914 aa9.89□□□□□ -0.83
VPS8-224ENST00000488255 USP4Q13107 963 aa9.89□□□□□ -0.83
VPS8-224ENST00000488255 CYP2U1Q7Z449 544 aa9.89□□□□□ -0.83
VPS8-224ENST00000488255 DEPDC4Q8N2C3 294 aa9.89□□□□□ -0.83
VPS8-224ENST00000488255 CALR3Q96L12 384 aaKnown RBP9.89□□□□□ -0.83
VPS8-224ENST00000488255 DNMT3LQ9UJW3 386 aa9.89□□□□□ -0.83
VPS8-224ENST00000488255 ZNF775Q96BV0 537 aaPredicted RBP9.88□□□□□ -0.83
VPS8-224ENST00000488255 ARHGEF10LQ9HCE6 1279 aa9.88□□□□□ -0.83
VPS8-224ENST00000488255 A0A1W2PRU2 124 aa9.87□□□□□ -0.83
VPS8-224ENST00000488255 STAU1O95793 577 aaKnown RBP9.87□□□□□ -0.83
VPS8-224ENST00000488255 MAP7D1Q3KQU3 841 aa9.87□□□□□ -0.83
VPS8-224ENST00000488255 ZMYND15Q9H091 742 aa9.87□□□□□ -0.83
VPS8-224ENST00000488255 TBC1D9Q6ZT07 1266 aa9.86□□□□□ -0.83
VPS8-224ENST00000488255 NLRP3Q96P20 1036 aa9.86□□□□□ -0.83
VPS8-224ENST00000488255 UCN2Q96RP3 112 aa9.86□□□□□ -0.83
VPS8-224ENST00000488255 CHIC2Q9UKJ5 165 aa9.86□□□□□ -0.83
VPS8-224ENST00000488255 VEGFBP49765 207 aa9.85□□□□□ -0.83
VPS8-224ENST00000488255 EML3Q32P44 896 aa9.85□□□□□ -0.83
VPS8-224ENST00000488255 SIRT1Q96EB6 747 aa9.85□□□□□ -0.83
VPS8-224ENST00000488255 USP17L5A8MUK1 530 aa9.84□□□□□ -0.83
VPS8-224ENST00000488255 NCOA4Q13772 614 aa9.84□□□□□ -0.83
VPS8-224ENST00000488255 FOXD4L5Q5VV16 416 aaPredicted RBP9.84□□□□□ -0.83
VPS8-224ENST00000488255 C14orf37Q86TY3 774 aa9.84□□□□□ -0.83
VPS8-224ENST00000488255 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.83□□□□□ -0.84
VPS8-224ENST00000488255 PRICKLE2Q7Z3G6 844 aa9.83□□□□□ -0.84
VPS8-224ENST00000488255 RNF217Q8TC41 542 aa9.83□□□□□ -0.84
VPS8-224ENST00000488255 GNRH1P01148 92 aa9.82□□□□□ -0.84
VPS8-224ENST00000488255 SLC27A3Q5K4L6 730 aa9.82□□□□□ -0.84
VPS8-224ENST00000488255 NFATC2IPQ8NCF5 419 aa9.82□□□□□ -0.84
VPS8-224ENST00000488255 TFIP11Q9UBB9 837 aaKnown RBP9.82□□□□□ -0.84
VPS8-224ENST00000488255 NOD1Q9Y239 953 aa9.82□□□□□ -0.84
VPS8-224ENST00000488255 ATP9BO43861 1147 aa9.81□□□□□ -0.84
VPS8-224ENST00000488255 RHOQP17081 205 aa9.81□□□□□ -0.84
VPS8-224ENST00000488255 PSME1Q06323 249 aa9.81□□□□□ -0.84
VPS8-224ENST00000488255 CLN3Q13286 438 aa9.81□□□□□ -0.84
VPS8-224ENST00000488255 CNKSR1Q969H4 720 aa9.81□□□□□ -0.84
VPS8-224ENST00000488255 USP17L3A6NCW0 530 aa9.8□□□□□ -0.84
VPS8-224ENST00000488255 USP17L4A6NCW7 530 aa9.8□□□□□ -0.84
VPS8-224ENST00000488255 IL2RAP01589 272 aa9.8□□□□□ -0.84
VPS8-224ENST00000488255 USP17L2Q6R6M4 530 aa9.8□□□□□ -0.84
VPS8-224ENST00000488255 USP17L1Q7RTZ2 530 aa9.8□□□□□ -0.84
VPS8-224ENST00000488255 LYSMD3Q7Z3D4 306 aa9.8□□□□□ -0.84
VPS8-224ENST00000488255 RNF144AP50876 292 aaPredicted RBP9.79□□□□□ -0.84
VPS8-224ENST00000488255 GTF2IP78347 998 aa9.79□□□□□ -0.84
VPS8-224ENST00000488255 PTSQ03393 145 aa9.79□□□□□ -0.84
VPS8-224ENST00000488255 ETNK1Q9HBU6 452 aa9.79□□□□□ -0.84
VPS8-224ENST00000488255 NXF1Q9UBU9 619 aaKnown RBP9.79□□□□□ -0.84
VPS8-224ENST00000488255 PALM3A6NDB9 673 aaPredicted RBP9.78□□□□□ -0.84
VPS8-224ENST00000488255 TERTO14746 1132 aaKnown RBP9.78□□□□□ -0.84
VPS8-224ENST00000488255 GDF10P55107 478 aa9.78□□□□□ -0.84
VPS8-224ENST00000488255 ESCO1Q5FWF5 840 aa9.78□□□□□ -0.84
VPS8-224ENST00000488255 ESYT1Q9BSJ8 1104 aa9.78□□□□□ -0.84
VPS8-224ENST00000488255 SERTAD1Q9UHV2 236 aa9.78□□□□□ -0.84
VPS8-224ENST00000488255 ARID3CA6NKF2 412 aa9.77□□□□□ -0.85
VPS8-224ENST00000488255 CENPCQ03188 943 aa9.77□□□□□ -0.85
VPS8-224ENST00000488255 POU4F2Q12837 409 aa9.77□□□□□ -0.85
VPS8-224ENST00000488255 PPP1R12CQ9BZL4 782 aa9.77□□□□□ -0.85
VPS8-224ENST00000488255 LZTS3O60299 673 aaPredicted RBP9.76□□□□□ -0.85
VPS8-224ENST00000488255 LMOD1P29536 600 aaPredicted RBP9.76□□□□□ -0.85
VPS8-224ENST00000488255 XAGE2Q96GT9 111 aa9.76□□□□□ -0.85
VPS8-224ENST00000488255 MKRN1Q9UHC7 482 aaKnown RBP9.76□□□□□ -0.85
VPS8-224ENST00000488255 PCDHGA11Q9Y5H2 935 aa9.76□□□□□ -0.85
VPS8-224ENST00000488255 WFS1O76024 890 aa9.75□□□□□ -0.85
VPS8-224ENST00000488255 GPC1P35052 558 aa9.75□□□□□ -0.85
VPS8-224ENST00000488255 SCNN1DP51172 638 aa9.75□□□□□ -0.85
VPS8-224ENST00000488255 PLEKHM2Q8IWE5 1019 aa9.75□□□□□ -0.85
VPS8-224ENST00000488255 ZSCAN10Q96SZ4 725 aaPredicted RBP9.75□□□□□ -0.85
VPS8-224ENST00000488255 MAFBQ9Y5Q3 323 aaPredicted RBP9.75□□□□□ -0.85
VPS8-224ENST00000488255 PPFIA3O75145 1194 aa9.74□□□□□ -0.85
VPS8-224ENST00000488255 RFX1P22670 979 aa9.74□□□□□ -0.85
VPS8-224ENST00000488255 TLR1Q15399 786 aa9.74□□□□□ -0.85
VPS8-224ENST00000488255 SLC16A10Q8TF71 515 aa9.74□□□□□ -0.85
VPS8-224ENST00000488255 GRIP2Q9C0E4 1043 aa9.74□□□□□ -0.85
VPS8-224ENST00000488255 INHAP05111 366 aa9.73□□□□□ -0.85
VPS8-224ENST00000488255 GTF2E1P29083 439 aaPredicted RBP9.73□□□□□ -0.85
VPS8-224ENST00000488255 PHKA2P46019 1235 aa9.73□□□□□ -0.85
VPS8-224ENST00000488255 NFX1Q12986 1120 aaKnown RBP9.73□□□□□ -0.85
VPS8-224ENST00000488255 TMEM214Q6NUQ4 689 aaKnown RBP9.73□□□□□ -0.85
VPS8-224ENST00000488255 TREML4Q6UXN2 200 aa9.73□□□□□ -0.85
VPS8-224ENST00000488255 TRIM50Q86XT4 487 aa9.73□□□□□ -0.85
VPS8-224ENST00000488255 CCDC155Q8N6L0 562 aa9.73□□□□□ -0.85
VPS8-224ENST00000488255 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.73□□□□□ -0.85
VPS8-224ENST00000488255 TMEM229AB2RXF0 380 aa9.72□□□□□ -0.85
VPS8-224ENST00000488255 CDCA8Q53HL2 280 aa9.72□□□□□ -0.85
VPS8-224ENST00000488255 OGFOD1Q8N543 542 aa9.72□□□□□ -0.85
VPS8-224ENST00000488255 TPCN2Q8NHX9 752 aa9.72□□□□□ -0.85
VPS8-224ENST00000488255 ZNF594Q96JF6 807 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms