RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 MBIPQ9NS73 344 aa6.56□□□□□ -1.36
HFM1-208ENST00000488023 IGF1RP08069 1367 aa6.56□□□□□ -1.36
HFM1-208ENST00000488023 ITGB7P26010 798 aa6.55□□□□□ -1.36
HFM1-208ENST00000488023 ACDQ96AP0 544 aa6.55□□□□□ -1.36
HFM1-208ENST00000488023 RNF217Q8TC41 542 aa6.54□□□□□ -1.36
HFM1-208ENST00000488023 KCTD15Q96SI1 283 aaPredicted RBP6.54□□□□□ -1.36
HFM1-208ENST00000488023 INSM2Q96T92 566 aaPredicted RBP6.54□□□□□ -1.36
HFM1-208ENST00000488023 UBTFP17480 764 aaKnown RBP6.53□□□□□ -1.36
HFM1-208ENST00000488023 CLK2P49760 499 aaKnown RBP6.53□□□□□ -1.36
HFM1-208ENST00000488023 CTDSPL2Q05D32 466 aa6.53□□□□□ -1.36
HFM1-208ENST00000488023 PDXDC2PQ6P474 469 aa6.53□□□□□ -1.36
HFM1-208ENST00000488023 ARHGAP9Q9BRR9 750 aa6.53□□□□□ -1.36
HFM1-208ENST00000488023 DHX9Q08211 1270 aaKnown RBP6.52□□□□□ -1.37
HFM1-208ENST00000488023 DDRGK1Q96HY6 314 aa6.52□□□□□ -1.37
HFM1-208ENST00000488023 AGBL1Q96MI9 1066 aa6.52□□□□□ -1.37
HFM1-208ENST00000488023 FAM117AQ9C073 453 aa6.52□□□□□ -1.37
HFM1-208ENST00000488023 CDV3Q9UKY7 258 aaKnown RBP6.52□□□□□ -1.37
HFM1-208ENST00000488023 SNRPNP63162 240 aaKnown RBP6.52□□□□□ -1.37
HFM1-208ENST00000488023 SLC10A4Q96EP9 437 aa6.52□□□□□ -1.37
HFM1-208ENST00000488023 COL8A1P27658 744 aa6.51□□□□□ -1.37
HFM1-208ENST00000488023 LCE1DQ5T752 114 aa6.51□□□□□ -1.37
HFM1-208ENST00000488023 POLMQ9NP87 494 aaPredicted RBP6.51□□□□□ -1.37
HFM1-208ENST00000488023 LRRC4BQ9NT99 713 aa6.51□□□□□ -1.37
HFM1-208ENST00000488023 POLR3EQ9NVU0 708 aa6.51□□□□□ -1.37
HFM1-208ENST00000488023 FKBPLQ9UIM3 349 aa6.51□□□□□ -1.37
HFM1-208ENST00000488023 RELBQ01201 579 aa6.5□□□□□ -1.37
HFM1-208ENST00000488023 INTS6LQ5JSJ4 861 aaKnown RBP6.5□□□□□ -1.37
HFM1-208ENST00000488023 ZBTB33Q86T24 672 aa6.5□□□□□ -1.37
HFM1-208ENST00000488023 ALYREFQ86V81 257 aaKnown RBP6.5□□□□□ -1.37
HFM1-208ENST00000488023 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
HFM1-208ENST00000488023 GPR25O00155 361 aa6.49□□□□□ -1.37
HFM1-208ENST00000488023 RANGAP1P46060 587 aaPredicted RBP6.49□□□□□ -1.37
HFM1-208ENST00000488023 ZMYM1Q5SVZ6 1142 aa6.49□□□□□ -1.37
HFM1-208ENST00000488023 LRRN4Q8WUT4 740 aa6.49□□□□□ -1.37
HFM1-208ENST00000488023 ZNF837Q96EG3 531 aaPredicted RBP6.49□□□□□ -1.37
HFM1-208ENST00000488023 SKIV2LQ15477 1246 aaKnown RBP6.49□□□□□ -1.37
HFM1-208ENST00000488023 SH3D19Q5HYK7 790 aa6.49□□□□□ -1.37
HFM1-208ENST00000488023 OCSTAMPQ9BR26 566 aa6.49□□□□□ -1.37
HFM1-208ENST00000488023 KRTAP4-2Q9BYR5 136 aa6.49□□□□□ -1.37
HFM1-208ENST00000488023 ZNF395Q9H8N7 513 aaPredicted RBP6.49□□□□□ -1.37
HFM1-208ENST00000488023 OIP5O43482 229 aa6.48□□□□□ -1.37
HFM1-208ENST00000488023 TRIM26Q12899 539 aaPredicted RBP6.48□□□□□ -1.37
HFM1-208ENST00000488023 IL27Q8NEV9 243 aa6.48□□□□□ -1.37
HFM1-208ENST00000488023 ZC3H4Q9UPT8 1303 aaKnown RBP6.48□□□□□ -1.37
HFM1-208ENST00000488023 PTK2Q05397 1052 aa6.47□□□□□ -1.37
HFM1-208ENST00000488023 NR6A1Q15406 480 aa6.47□□□□□ -1.37
HFM1-208ENST00000488023 FOXD4L5Q5VV16 416 aaPredicted RBP6.47□□□□□ -1.37
HFM1-208ENST00000488023 TRIM22Q8IYM9 498 aa6.47□□□□□ -1.37
HFM1-208ENST00000488023 TMPRSS4Q9NRS4 437 aa6.47□□□□□ -1.37
HFM1-208ENST00000488023 GMCL1Q96IK5 515 aa6.46□□□□□ -1.37
HFM1-208ENST00000488023 SEMA6BQ9H3T3 888 aa6.46□□□□□ -1.37
HFM1-208ENST00000488023 MKL2Q9ULH7 1088 aa6.46□□□□□ -1.37
HFM1-208ENST00000488023 C1QTNF9BB2RNN3 333 aa6.45□□□□□ -1.38
HFM1-208ENST00000488023 FOXR1Q6PIV2 292 aa6.45□□□□□ -1.38
HFM1-208ENST00000488023 ADAM32Q8TC27 787 aa6.45□□□□□ -1.38
HFM1-208ENST00000488023 GPSM3Q9Y4H4 160 aa6.45□□□□□ -1.38
HFM1-208ENST00000488023 ADH1AP07327 375 aa6.45□□□□□ -1.38
HFM1-208ENST00000488023 ADD1P35611 737 aaKnown RBP6.45□□□□□ -1.38
HFM1-208ENST00000488023 DBN1Q16643 649 aa6.45□□□□□ -1.38
HFM1-208ENST00000488023 FBXO31Q5XUX0 539 aaPredicted RBP6.45□□□□□ -1.38
HFM1-208ENST00000488023 ZNF784Q8NCA9 323 aaPredicted RBP6.45□□□□□ -1.38
HFM1-208ENST00000488023 PTGIRP43119 386 aa6.44□□□□□ -1.38
HFM1-208ENST00000488023 KDF1Q8NAX2 398 aaPredicted RBP6.44□□□□□ -1.38
HFM1-208ENST00000488023 SHISA8B8ZZ34 492 aa6.43□□□□□ -1.38
HFM1-208ENST00000488023 LILRA1O75019 489 aa6.43□□□□□ -1.38
HFM1-208ENST00000488023 RAB15P59190 212 aa6.43□□□□□ -1.38
HFM1-208ENST00000488023 NBPF20Q3BBV1 942 aa6.43□□□□□ -1.38
HFM1-208ENST00000488023 LYSMD3Q7Z3D4 306 aa6.43□□□□□ -1.38
HFM1-208ENST00000488023 CD163Q86VB7 1156 aa6.43□□□□□ -1.38
HFM1-208ENST00000488023 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
HFM1-208ENST00000488023 ATP1B4Q9UN42 357 aaPredicted RBP6.43□□□□□ -1.38
HFM1-208ENST00000488023 ERVH48-1M5A8F1 160 aa6.42□□□□□ -1.38
HFM1-208ENST00000488023 PPP2R2DQ66LE6 453 aa6.42□□□□□ -1.38
HFM1-208ENST00000488023 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.42□□□□□ -1.38
HFM1-208ENST00000488023 GOPCQ9HD26 462 aa6.42□□□□□ -1.38
HFM1-208ENST00000488023 GRIN2CQ14957 1233 aa6.42□□□□□ -1.38
HFM1-208ENST00000488023 FOXD4L6Q3SYB3 417 aaPredicted RBP6.42□□□□□ -1.38
HFM1-208ENST00000488023 FOXD4L3Q6VB84 417 aaPredicted RBP6.42□□□□□ -1.38
HFM1-208ENST00000488023 PROCA1Q8NCQ7 364 aaPredicted RBP6.42□□□□□ -1.38
HFM1-208ENST00000488023 GTPBP3Q969Y2 492 aaKnown RBP6.42□□□□□ -1.38
HFM1-208ENST00000488023 SUV39H2Q9H5I1 410 aa6.42□□□□□ -1.38
HFM1-208ENST00000488023 RHOQP17081 205 aa6.41□□□□□ -1.38
HFM1-208ENST00000488023 MX2P20592 715 aa6.41□□□□□ -1.38
HFM1-208ENST00000488023 DZIP3Q86Y13 1208 aaKnown RBP6.41□□□□□ -1.38
HFM1-208ENST00000488023 EPS8L1Q8TE68 723 aa6.41□□□□□ -1.38
HFM1-208ENST00000488023 ESPNB1AK53 854 aa6.4□□□□□ -1.38
HFM1-208ENST00000488023 DOC2BQ14184 412 aa6.4□□□□□ -1.38
HFM1-208ENST00000488023 PCMTD1Q96MG8 357 aaPredicted RBP6.4□□□□□ -1.38
HFM1-208ENST00000488023 OXCT2Q9BYC2 517 aaPredicted RBP6.4□□□□□ -1.38
HFM1-208ENST00000488023 GOLGA2P5Q9HBQ8 144 aa6.4□□□□□ -1.38
HFM1-208ENST00000488023 NSFL1CQ9UNZ2 370 aaKnown RBP6.4□□□□□ -1.38
HFM1-208ENST00000488023 SCO2A0A1W2PP80 73 aa6.39□□□□□ -1.39
HFM1-208ENST00000488023 AP1G2O75843 785 aa6.39□□□□□ -1.39
HFM1-208ENST00000488023 RNF144AP50876 292 aaPredicted RBP6.39□□□□□ -1.39
HFM1-208ENST00000488023 LINC00114Q6XXX2 140 aa6.39□□□□□ -1.39
HFM1-208ENST00000488023 RIPOR1Q6ZS17 1223 aa6.39□□□□□ -1.39
HFM1-208ENST00000488023 C1orf229Q6ZS94 237 aaPredicted RBP6.39□□□□□ -1.39
HFM1-208ENST00000488023 PRICKLE2Q7Z3G6 844 aa6.39□□□□□ -1.39
HFM1-208ENST00000488023 TRERF1Q96PN7 1200 aa6.39□□□□□ -1.39
HFM1-208ENST00000488023 CHRNA4P43681 627 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms