RNA–Protein interactions for RNA: ENST00000487678.1

PDCD10-213, Transcript of programmed cell death 10, humanhuman

TSL 3

Gene PDCD10, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-213ENST00000487678 PNMA1Q8ND90 353 aa12.26□□□□□ -0.45
PDCD10-213ENST00000487678 PCDHB9Q9Y5E1 797 aa12.26□□□□□ -0.45
PDCD10-213ENST00000487678 GPR25O00155 361 aa12.25□□□□□ -0.45
PDCD10-213ENST00000487678 MEN1O00255 615 aa12.24□□□□□ -0.45
PDCD10-213ENST00000487678 ZNF837Q96EG3 531 aaPredicted RBP12.24□□□□□ -0.45
PDCD10-213ENST00000487678 ZBBXA8MT70 800 aa12.23□□□□□ -0.45
PDCD10-213ENST00000487678 ATP5J2-PTCD1G3V325 749 aa12.23□□□□□ -0.45
PDCD10-213ENST00000487678 A0A1W2PRU2 124 aa12.22□□□□□ -0.45
PDCD10-213ENST00000487678 SCTRP47872 440 aa12.22□□□□□ -0.45
PDCD10-213ENST00000487678 DBN1Q16643 649 aa12.22□□□□□ -0.45
PDCD10-213ENST00000487678 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
PDCD10-213ENST00000487678 GPR37L1O60883 481 aa12.21□□□□□ -0.45
PDCD10-213ENST00000487678 CELA2BP08218 269 aaPredicted RBP12.21□□□□□ -0.45
PDCD10-213ENST00000487678 IL27Q8NEV9 243 aa12.21□□□□□ -0.45
PDCD10-213ENST00000487678 RNF225M0QZC1 329 aaPredicted RBP12.2□□□□□ -0.46
PDCD10-213ENST00000487678 SRSF11Q05519 484 aaKnown RBP12.2□□□□□ -0.46
PDCD10-213ENST00000487678 POU4F2Q12837 409 aa12.2□□□□□ -0.46
PDCD10-213ENST00000487678 PCMTD1Q96MG8 357 aaPredicted RBP12.2□□□□□ -0.46
PDCD10-213ENST00000487678 ERVK-9P63128 1117 aa12.19□□□□□ -0.46
PDCD10-213ENST00000487678 MARSP56192 900 aaKnown RBP12.18□□□□□ -0.46
PDCD10-213ENST00000487678 TMEM259Q4ZIN3 620 aa12.18□□□□□ -0.46
PDCD10-213ENST00000487678 RIPOR1Q6ZS17 1223 aa12.18□□□□□ -0.46
PDCD10-213ENST00000487678 GPAT2Q6NUI2 795 aa12.17□□□□□ -0.46
PDCD10-213ENST00000487678 TRIM22Q8IYM9 498 aa12.17□□□□□ -0.46
PDCD10-213ENST00000487678 GOPCQ9HD26 462 aa12.17□□□□□ -0.46
PDCD10-213ENST00000487678 CC2D2BQ6DHV5 1058 aa12.15□□□□□ -0.46
PDCD10-213ENST00000487678 GTPBP3Q969Y2 492 aaKnown RBP12.15□□□□□ -0.46
PDCD10-213ENST00000487678 GAS2L1Q99501 681 aaPredicted RBP12.15□□□□□ -0.46
PDCD10-213ENST00000487678 OSBPL3Q9H4L5 887 aa12.14□□□□□ -0.47
PDCD10-213ENST00000487678 GRIP2Q9C0E4 1043 aa12.13□□□□□ -0.47
PDCD10-213ENST00000487678 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
PDCD10-213ENST00000487678 IGF1RP08069 1367 aa12.13□□□□□ -0.47
PDCD10-213ENST00000487678 CNTNAP5Q8WYK1 1306 aa12.12□□□□□ -0.47
PDCD10-213ENST00000487678 GPC1P35052 558 aa12.12□□□□□ -0.47
PDCD10-213ENST00000487678 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
PDCD10-213ENST00000487678 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
PDCD10-213ENST00000487678 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
PDCD10-213ENST00000487678 ARHGEF10LQ9HCE6 1279 aa12.12□□□□□ -0.47
PDCD10-213ENST00000487678 RAB6BQ9NRW1 208 aa12.12□□□□□ -0.47
PDCD10-213ENST00000487678 PCDHB11Q9Y5F2 797 aa12.12□□□□□ -0.47
PDCD10-213ENST00000487678 DNMT3AQ9Y6K1 912 aaPredicted RBP12.12□□□□□ -0.47
PDCD10-213ENST00000487678 THBS1P07996 1170 aa12.11□□□□□ -0.47
PDCD10-213ENST00000487678 NR1H3Q13133 447 aa12.11□□□□□ -0.47
PDCD10-213ENST00000487678 SLC27A3Q5K4L6 730 aa12.11□□□□□ -0.47
PDCD10-213ENST00000487678 ACDQ96AP0 544 aa12.11□□□□□ -0.47
PDCD10-213ENST00000487678 BCANQ96GW7 911 aa12.11□□□□□ -0.47
PDCD10-213ENST00000487678 DYRK1BQ9Y463 629 aa12.11□□□□□ -0.47
PDCD10-213ENST00000487678 TRAK2O60296 914 aa12.1□□□□□ -0.47
PDCD10-213ENST00000487678 MAP3K10Q02779 954 aa12.1□□□□□ -0.47
PDCD10-213ENST00000487678 MTMR14Q8NCE2 650 aa12.1□□□□□ -0.47
PDCD10-213ENST00000487678 NLRP3Q96P20 1036 aa12.1□□□□□ -0.47
PDCD10-213ENST00000487678 CLN3Q13286 438 aa12.09□□□□□ -0.47
PDCD10-213ENST00000487678 SCARF2Q96GP6 870 aaPredicted RBP12.09□□□□□ -0.47
PDCD10-213ENST00000487678 ITGB2P05107 769 aa12.08□□□□□ -0.48
PDCD10-213ENST00000487678 KANK3Q6NY19 840 aa12.08□□□□□ -0.48
PDCD10-213ENST00000487678 CDCA7Q9BWT1 371 aaPredicted RBP12.08□□□□□ -0.48
PDCD10-213ENST00000487678 SNRKQ9NRH2 765 aa12.07□□□□□ -0.48
PDCD10-213ENST00000487678 CYP2U1Q7Z449 544 aa12.06□□□□□ -0.48
PDCD10-213ENST00000487678 SPATA31C2B4DYI2 1134 aa12.05□□□□□ -0.48
PDCD10-213ENST00000487678 IL2RAP01589 272 aa12.05□□□□□ -0.48
PDCD10-213ENST00000487678 GMCL1Q96IK5 515 aa12.05□□□□□ -0.48
PDCD10-213ENST00000487678 TIMMDC1Q9NPL8 285 aa12.05□□□□□ -0.48
PDCD10-213ENST00000487678 BCRP11274 1271 aa12.04□□□□□ -0.48
PDCD10-213ENST00000487678 RNF20Q5VTR2 975 aa12.04□□□□□ -0.48
PDCD10-213ENST00000487678 CCDC85AQ96PX6 553 aaPredicted RBP12.04□□□□□ -0.48
PDCD10-213ENST00000487678 WASLO00401 505 aaPredicted RBP12.03□□□□□ -0.48
PDCD10-213ENST00000487678 STAU1O95793 577 aaKnown RBP12.03□□□□□ -0.48
PDCD10-213ENST00000487678 TSGA10IPQ3SY00 556 aa12.03□□□□□ -0.48
PDCD10-213ENST00000487678 FOXR1Q6PIV2 292 aa12.03□□□□□ -0.48
PDCD10-213ENST00000487678 PHKA2P46019 1235 aa12.02□□□□□ -0.49
PDCD10-213ENST00000487678 BRPF1P55201 1214 aaPredicted RBP12.02□□□□□ -0.49
PDCD10-213ENST00000487678 TAS1R3Q7RTX0 852 aa12.02□□□□□ -0.49
PDCD10-213ENST00000487678 NUCKS1Q9H1E3 243 aaKnown RBP12.02□□□□□ -0.49
PDCD10-213ENST00000487678 GPAMQ9HCL2 828 aa12.02□□□□□ -0.49
PDCD10-213ENST00000487678 H7C1W4 665 aa12.01□□□□□ -0.49
PDCD10-213ENST00000487678 CNKSR1Q969H4 720 aa12.01□□□□□ -0.49
PDCD10-213ENST00000487678 DCAF5Q96JK2 942 aa12.01□□□□□ -0.49
PDCD10-213ENST00000487678 MX2P20592 715 aa12□□□□□ -0.49
PDCD10-213ENST00000487678 CENPCQ03188 943 aa12□□□□□ -0.49
PDCD10-213ENST00000487678 PLA2G4EQ3MJ16 856 aa12□□□□□ -0.49
PDCD10-213ENST00000487678 NEDD1Q8NHV4 660 aa12□□□□□ -0.49
PDCD10-213ENST00000487678 ENAMQ9NRM1 1142 aa12□□□□□ -0.49
PDCD10-213ENST00000487678 HRH3Q9Y5N1 445 aa12□□□□□ -0.49
PDCD10-213ENST00000487678 F11P03951 625 aa11.99□□□□□ -0.49
PDCD10-213ENST00000487678 C1orf229Q6ZS94 237 aaPredicted RBP11.99□□□□□ -0.49
PDCD10-213ENST00000487678 CCDC125Q86Z20 511 aa11.99□□□□□ -0.49
PDCD10-213ENST00000487678 TRERF1Q96PN7 1200 aa11.99□□□□□ -0.49
PDCD10-213ENST00000487678 ESYT1Q9BSJ8 1104 aa11.99□□□□□ -0.49
PDCD10-213ENST00000487678 NDUFB9Q9Y6M9 179 aa11.99□□□□□ -0.49
PDCD10-213ENST00000487678 CEP126Q9P2H0 1117 aa11.98□□□□□ -0.49
PDCD10-213ENST00000487678 IGHA1P01876 353 aa11.97□□□□□ -0.49
PDCD10-213ENST00000487678 SNRPNP63162 240 aaKnown RBP11.97□□□□□ -0.49
PDCD10-213ENST00000487678 UBAP2LQ14157 1087 aaKnown RBP11.97□□□□□ -0.49
PDCD10-213ENST00000487678 WDR44Q5JSH3 913 aa11.97□□□□□ -0.49
PDCD10-213ENST00000487678 BANK1Q8NDB2 785 aa11.97□□□□□ -0.49
PDCD10-213ENST00000487678 TRIM52Q96A61 297 aa11.97□□□□□ -0.49
PDCD10-213ENST00000487678 FHDC1Q9C0D6 1143 aaPredicted RBP11.97□□□□□ -0.49
PDCD10-213ENST00000487678 GNRH1P01148 92 aa11.96□□□□□ -0.49
PDCD10-213ENST00000487678 MCCD1P59942 119 aaPredicted RBP11.96□□□□□ -0.49
PDCD10-213ENST00000487678 SHISA8B8ZZ34 492 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms