RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 CCT4P50991 539 aaKnown RBP18.13■□□□□ 0.49
HLA-DQB1-209ENST00000487676 STX6O43752 255 aa18.13■□□□□ 0.49
HLA-DQB1-209ENST00000487676 IFIT2P09913 472 aaKnown RBP18.13■□□□□ 0.49
HLA-DQB1-209ENST00000487676 C14orf37Q86TY3 774 aa18.13■□□□□ 0.49
HLA-DQB1-209ENST00000487676 APPP05067 770 aa18.13■□□□□ 0.49
HLA-DQB1-209ENST00000487676 GTF2F1P35269 517 aaKnown RBP eCLIP18.13■□□□□ 0.49
HLA-DQB1-209ENST00000487676 EIF2AK4Q9P2K8 1649 aaKnown RBP18.12■□□□□ 0.49
HLA-DQB1-209ENST00000487676 CCDC186Q7Z3E2 898 aa18.12■□□□□ 0.49
HLA-DQB1-209ENST00000487676 INTS4Q96HW7 963 aaKnown RBP18.12■□□□□ 0.49
HLA-DQB1-209ENST00000487676 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
HLA-DQB1-209ENST00000487676 UBTFL1P0CB47 393 aaPredicted RBP18.12■□□□□ 0.49
HLA-DQB1-209ENST00000487676 FAM200AQ8TCP9 573 aa18.12■□□□□ 0.49
HLA-DQB1-209ENST00000487676 ARHGEF11O15085 1522 aa18.12■□□□□ 0.49
HLA-DQB1-209ENST00000487676 SYNJ2O15056 1496 aa18.12■□□□□ 0.49
HLA-DQB1-209ENST00000487676 ZNF397Q8NF99 534 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQB1-209ENST00000487676 SURF6O75683 361 aaKnown RBP18.11■□□□□ 0.49
HLA-DQB1-209ENST00000487676 SCAND2PQ9GZW5 306 aaPredicted RBP18.11■□□□□ 0.49
HLA-DQB1-209ENST00000487676 TPM1P09493 284 aa18.11■□□□□ 0.49
HLA-DQB1-209ENST00000487676 LIMCH1Q9UPQ0 1083 aa18.11■□□□□ 0.49
HLA-DQB1-209ENST00000487676 CCDC171Q6TFL3 1326 aa18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 ANAPC15P60006 121 aa18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 TSPYL4Q9UJ04 414 aa18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 MAGI1Q96QZ7 1491 aaPredicted RBP18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 ZSCAN22P10073 491 aaPredicted RBP18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 PDRG1Q9NUG6 133 aa18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 MBD5Q9P267 1494 aa18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 C17orf53Q8N3J3 647 aaPredicted RBP18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 BCORL1Q5H9F3 1711 aa18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 PLEKHM2Q8IWE5 1019 aa18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 CEP57L1Q8IYX8 460 aa18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 DDX19AQ9NUU7 478 aaKnown RBP18.1■□□□□ 0.49
HLA-DQB1-209ENST00000487676 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
HLA-DQB1-209ENST00000487676 ANKRD1Q15327 319 aa18.09■□□□□ 0.49
HLA-DQB1-209ENST00000487676 CNPY2Q9Y2B0 182 aa18.09■□□□□ 0.49
HLA-DQB1-209ENST00000487676 EXOC6BQ9Y2D4 811 aa18.09■□□□□ 0.49
HLA-DQB1-209ENST00000487676 NSD2O96028 1365 aa18.09■□□□□ 0.49
HLA-DQB1-209ENST00000487676 CCDC83Q8IWF9 413 aa18.08■□□□□ 0.49
HLA-DQB1-209ENST00000487676 CKAP2LQ8IYA6 745 aa18.08■□□□□ 0.49
HLA-DQB1-209ENST00000487676 DENND4BO75064 1496 aaPredicted RBP18.08■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ADGRL2O95490 1459 aa18.08■□□□□ 0.48
HLA-DQB1-209ENST00000487676 CAVIN2O95810 425 aa18.08■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ZNF165P49910 485 aa18.08■□□□□ 0.48
HLA-DQB1-209ENST00000487676 CARD14Q9BXL6 1004 aa18.08■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ERCC6Q03468 1493 aa18.08■□□□□ 0.48
HLA-DQB1-209ENST00000487676 FERMT3Q86UX7 667 aa18.08■□□□□ 0.48
HLA-DQB1-209ENST00000487676 SH2B1Q9NRF2 756 aaPredicted RBP18.08■□□□□ 0.48
HLA-DQB1-209ENST00000487676 POLR3GO15318 223 aaPredicted RBP18.07■□□□□ 0.48
HLA-DQB1-209ENST00000487676 FMNL2Q96PY5 1086 aa18.07■□□□□ 0.48
HLA-DQB1-209ENST00000487676 DEF6Q9H4E7 631 aa18.07■□□□□ 0.48
HLA-DQB1-209ENST00000487676 TRMT1Q9NXH9 659 aaKnown RBP18.07■□□□□ 0.48
HLA-DQB1-209ENST00000487676 FAM135AQ9P2D6 1515 aa18.07■□□□□ 0.48
HLA-DQB1-209ENST00000487676 GPT2Q8TD30 523 aa18.07■□□□□ 0.48
HLA-DQB1-209ENST00000487676 JAKMIP1Q96N16 626 aaKnown RBP18.07■□□□□ 0.48
HLA-DQB1-209ENST00000487676 DCTPP1Q9H773 170 aa18.07■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ABCC2Q92887 1545 aa18.07■□□□□ 0.48
HLA-DQB1-209ENST00000487676 CLASRPQ8N2M8 674 aaKnown RBP18.07■□□□□ 0.48
HLA-DQB1-209ENST00000487676 PTGS1P23219 599 aa18.06■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ERCC4Q92889 916 aaPredicted RBP18.06■□□□□ 0.48
HLA-DQB1-209ENST00000487676 PDLIM2Q96JY6 352 aa18.06■□□□□ 0.48
HLA-DQB1-209ENST00000487676 CFAP45Q9UL16 551 aa18.06■□□□□ 0.48
HLA-DQB1-209ENST00000487676 MAGI3Q5TCQ9 1506 aa18.06■□□□□ 0.48
HLA-DQB1-209ENST00000487676 CASTP20810 708 aaKnown RBP18.06■□□□□ 0.48
HLA-DQB1-209ENST00000487676 NECTIN2Q92692 538 aa18.06■□□□□ 0.48
HLA-DQB1-209ENST00000487676 NCBP3Q53F19 620 aaKnown RBP18.05■□□□□ 0.48
HLA-DQB1-209ENST00000487676 PLB1Q6P1J6 1458 aa18.05■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ITSN2Q9NZM3 1697 aa18.05■□□□□ 0.48
HLA-DQB1-209ENST00000487676 EIF3JO75822 258 aaKnown RBP18.05■□□□□ 0.48
HLA-DQB1-209ENST00000487676 SFPQP23246 707 aaKnown RBP eCLIP18.05■□□□□ 0.48
HLA-DQB1-209ENST00000487676 TXLNBQ8N3L3 684 aa18.05■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ANKRD44Q8N8A2 993 aa18.05■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ZBTB7BO15156 539 aaPredicted RBP18.05■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ZNF396Q96N95 335 aaPredicted RBP18.05■□□□□ 0.48
HLA-DQB1-209ENST00000487676 A2MP01023 1474 aa18.04■□□□□ 0.48
HLA-DQB1-209ENST00000487676 CD2BP2O95400 341 aaKnown RBP18.04■□□□□ 0.48
HLA-DQB1-209ENST00000487676 CEBPZQ03701 1054 aaKnown RBP18.04■□□□□ 0.48
HLA-DQB1-209ENST00000487676 GSDMDP57764 484 aa18.04■□□□□ 0.48
HLA-DQB1-209ENST00000487676 C16orf71Q8IYS4 520 aaPredicted RBP18.04■□□□□ 0.48
HLA-DQB1-209ENST00000487676 SLU7O95391 586 aaKnown RBP18.04■□□□□ 0.48
HLA-DQB1-209ENST00000487676 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
HLA-DQB1-209ENST00000487676 CREBRFQ8IUR6 639 aa18.03■□□□□ 0.48
HLA-DQB1-209ENST00000487676 HIP1O00291 1037 aa18.03■□□□□ 0.48
HLA-DQB1-209ENST00000487676 NUP153P49790 1475 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-209ENST00000487676 WDR62O43379 1518 aa18.03■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ERLIN1O75477 346 aa18.03■□□□□ 0.48
HLA-DQB1-209ENST00000487676 CCDC70Q6NSX1 233 aa18.03■□□□□ 0.48
HLA-DQB1-209ENST00000487676 PLCD3Q8N3E9 789 aa18.03■□□□□ 0.48
HLA-DQB1-209ENST00000487676 MRPL50Q8N5N7 158 aaKnown RBP18.03■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ESYT1Q9BSJ8 1104 aa18.03■□□□□ 0.48
HLA-DQB1-209ENST00000487676 FOSBP53539 338 aa18.03■□□□□ 0.48
HLA-DQB1-209ENST00000487676 PKP1Q13835 747 aa18.03■□□□□ 0.48
HLA-DQB1-209ENST00000487676 VGLL3A8MV65 326 aa18.02■□□□□ 0.48
HLA-DQB1-209ENST00000487676 SNW1Q13573 536 aaKnown RBP18.02■□□□□ 0.48
HLA-DQB1-209ENST00000487676 CWC27Q6UX04 472 aaKnown RBP18.02■□□□□ 0.48
HLA-DQB1-209ENST00000487676 PDILTQ8N807 584 aa18.02■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ZNF692Q9BU19 519 aaPredicted RBP18.02■□□□□ 0.48
HLA-DQB1-209ENST00000487676 ANO10Q9NW15 660 aa18.02■□□□□ 0.48
HLA-DQB1-209ENST00000487676 SAMD9Q5K651 1589 aa18.02■□□□□ 0.48
HLA-DQB1-209ENST00000487676 BRD1O95696 1058 aa18.02■□□□□ 0.47
HLA-DQB1-209ENST00000487676 IRX3P78415 501 aaPredicted RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms