RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 SPATA31A7Q8IWB4 1347 aa10.01□□□□□ -0.81
UBE4B-209ENST00000487244 WNK3Q9BYP7 1800 aa10□□□□□ -0.81
UBE4B-209ENST00000487244 EIF4G2P78344 907 aaKnown RBP eCLIP10□□□□□ -0.81
UBE4B-209ENST00000487244 FAM98CQ17RN3 349 aaKnown RBP10□□□□□ -0.81
UBE4B-209ENST00000487244 AATKQ6ZMQ8 1374 aa10□□□□□ -0.81
UBE4B-209ENST00000487244 RGL2O15211 777 aa9.99□□□□□ -0.81
UBE4B-209ENST00000487244 SLC24A1O60721 1099 aa9.99□□□□□ -0.81
UBE4B-209ENST00000487244 SEC24BO95487 1268 aa9.99□□□□□ -0.81
UBE4B-209ENST00000487244 IER5LQ5T953 404 aa9.99□□□□□ -0.81
UBE4B-209ENST00000487244 LARP1Q6PKG0 1096 aaKnown RBP9.99□□□□□ -0.81
UBE4B-209ENST00000487244 ARHGEF25Q86VW2 580 aa9.99□□□□□ -0.81
UBE4B-209ENST00000487244 SEPT12Q8IYM1 358 aa9.99□□□□□ -0.81
UBE4B-209ENST00000487244 UPF1Q92900 1129 aaKnown RBP eCLIP9.99□□□□□ -0.81
UBE4B-209ENST00000487244 AXIN2Q9Y2T1 843 aa9.99□□□□□ -0.81
UBE4B-209ENST00000487244 SPATA31A1Q5TZJ5 1347 aa9.99□□□□□ -0.81
UBE4B-209ENST00000487244 C11orf95C9JLR9 678 aaPredicted RBP9.98□□□□□ -0.81
UBE4B-209ENST00000487244 ONECUT3O60422 494 aaPredicted RBP9.98□□□□□ -0.81
UBE4B-209ENST00000487244 CARD14Q9BXL6 1004 aa9.98□□□□□ -0.81
UBE4B-209ENST00000487244 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
UBE4B-209ENST00000487244 A0A0G2JS52 829 aa9.97□□□□□ -0.81
UBE4B-209ENST00000487244 MYT1Q01538 1121 aa9.97□□□□□ -0.81
UBE4B-209ENST00000487244 MKRN3Q13064 507 aaKnown RBP9.97□□□□□ -0.81
UBE4B-209ENST00000487244 CDCA8Q53HL2 280 aa9.97□□□□□ -0.81
UBE4B-209ENST00000487244 LHX8Q68G74 356 aa9.97□□□□□ -0.81
UBE4B-209ENST00000487244 KCNH5Q8NCM2 988 aa9.97□□□□□ -0.81
UBE4B-209ENST00000487244 POLR3GLQ9BT43 218 aa9.97□□□□□ -0.81
UBE4B-209ENST00000487244 NSD3Q9BZ95 1437 aa9.97□□□□□ -0.81
UBE4B-209ENST00000487244 ABCC6O95255 1503 aa9.97□□□□□ -0.81
UBE4B-209ENST00000487244 PARP4Q9UKK3 1724 aaKnown RBP9.96□□□□□ -0.81
UBE4B-209ENST00000487244 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-209ENST00000487244 FBLN1P23142 703 aa9.96□□□□□ -0.82
UBE4B-209ENST00000487244 EVA1CP58658 441 aa9.96□□□□□ -0.82
UBE4B-209ENST00000487244 ZFP91Q96JP5 570 aaPredicted RBP9.96□□□□□ -0.82
UBE4B-209ENST00000487244 GGNBP2Q9H3C7 697 aa9.96□□□□□ -0.82
UBE4B-209ENST00000487244 LRRC37A3O60309 1634 aa9.96□□□□□ -0.82
UBE4B-209ENST00000487244 PEAK1Q9H792 1746 aa9.96□□□□□ -0.82
UBE4B-209ENST00000487244 ANKRD26Q9UPS8 1709 aa9.96□□□□□ -0.82
UBE4B-209ENST00000487244 RGPD2P0DJD1 1756 aa9.96□□□□□ -0.82
UBE4B-209ENST00000487244 FYB1O15117 783 aa9.95□□□□□ -0.82
UBE4B-209ENST00000487244 FAM182BQ5T319 152 aa9.95□□□□□ -0.82
UBE4B-209ENST00000487244 CRB1P82279 1406 aa9.95□□□□□ -0.82
UBE4B-209ENST00000487244 WDR17Q8IZU2 1322 aa9.94□□□□□ -0.82
UBE4B-209ENST00000487244 KRT27Q7Z3Y8 459 aa9.94□□□□□ -0.82
UBE4B-209ENST00000487244 COG3Q96JB2 828 aa9.94□□□□□ -0.82
UBE4B-209ENST00000487244 TNS1Q9HBL0 1735 aaKnown RBP9.93□□□□□ -0.82
UBE4B-209ENST00000487244 MAP3K19Q56UN5 1328 aa9.93□□□□□ -0.82
UBE4B-209ENST00000487244 TCP11L2Q8N4U5 519 aa9.93□□□□□ -0.82
UBE4B-209ENST00000487244 KIF7Q2M1P5 1343 aa9.92□□□□□ -0.82
UBE4B-209ENST00000487244 MAP2P11137 1827 aaKnown RBP9.92□□□□□ -0.82
UBE4B-209ENST00000487244 PLCG2P16885 1265 aa9.92□□□□□ -0.82
UBE4B-209ENST00000487244 AMER1Q5JTC6 1135 aaPredicted RBP9.92□□□□□ -0.82
UBE4B-209ENST00000487244 BARGINQ6ZT62 677 aa9.92□□□□□ -0.82
UBE4B-209ENST00000487244 TOM1L2Q6ZVM7 507 aa9.92□□□□□ -0.82
UBE4B-209ENST00000487244 FAM208AQ9UK61 1670 aaKnown RBP9.92□□□□□ -0.82
UBE4B-209ENST00000487244 RGPD1P0DJD0 1748 aa9.91□□□□□ -0.82
UBE4B-209ENST00000487244 ERBB3P21860 1342 aa9.91□□□□□ -0.82
UBE4B-209ENST00000487244 STK25O00506 426 aa9.91□□□□□ -0.82
UBE4B-209ENST00000487244 CSB-PGBD3P0DP91 1061 aa9.91□□□□□ -0.82
UBE4B-209ENST00000487244 RRS1Q15050 365 aaKnown RBP9.91□□□□□ -0.82
UBE4B-209ENST00000487244 OCEL1Q9H607 264 aa9.91□□□□□ -0.82
UBE4B-209ENST00000487244 COLQQ9Y215 455 aaPredicted RBP9.91□□□□□ -0.82
UBE4B-209ENST00000487244 SBF2Q86WG5 1849 aa9.91□□□□□ -0.82
UBE4B-209ENST00000487244 DISP2A7MBM2 1401 aa9.9□□□□□ -0.82
UBE4B-209ENST00000487244 BLMP54132 1417 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-209ENST00000487244 HOXC9P31274 260 aa9.9□□□□□ -0.82
UBE4B-209ENST00000487244 ANKRD24Q8TF21 1146 aa9.9□□□□□ -0.82
UBE4B-209ENST00000487244 BCL11BQ9C0K0 894 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-209ENST00000487244 PANK3Q9H999 370 aa9.9□□□□□ -0.82
UBE4B-209ENST00000487244 THRAP3Q9Y2W1 955 aaKnown RBP9.9□□□□□ -0.82
UBE4B-209ENST00000487244 STK24Q9Y6E0 443 aa9.9□□□□□ -0.82
UBE4B-209ENST00000487244 CGNL1Q0VF96 1302 aa9.89□□□□□ -0.83
UBE4B-209ENST00000487244 POTEFA5A3E0 1075 aa9.89□□□□□ -0.83
UBE4B-209ENST00000487244 IRX5P78411 483 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-209ENST00000487244 IP6K1Q92551 441 aa9.89□□□□□ -0.83
UBE4B-209ENST00000487244 LTV1Q96GA3 475 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-209ENST00000487244 CARD10Q9BWT7 1032 aa9.89□□□□□ -0.83
UBE4B-209ENST00000487244 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.89□□□□□ -0.83
UBE4B-209ENST00000487244 RTL1A6NKG5 1358 aa9.88□□□□□ -0.83
UBE4B-209ENST00000487244 SHANK3Q9BYB0 1731 aa9.88□□□□□ -0.83
UBE4B-209ENST00000487244 DEFB132Q7Z7B7 95 aa9.88□□□□□ -0.83
UBE4B-209ENST00000487244 NLRP2Q9NX02 1062 aa9.88□□□□□ -0.83
UBE4B-209ENST00000487244 CCDC7Q96M83 1385 aa9.88□□□□□ -0.83
UBE4B-209ENST00000487244 WASHC2AQ641Q2 1341 aa9.87□□□□□ -0.83
UBE4B-209ENST00000487244 POTEB2H3BUK9 544 aa9.87□□□□□ -0.83
UBE4B-209ENST00000487244 AMPHP49418 695 aa9.87□□□□□ -0.83
UBE4B-209ENST00000487244 EFCAB3Q8N7B9 438 aa9.87□□□□□ -0.83
UBE4B-209ENST00000487244 EMILIN1Q9Y6C2 1016 aa9.87□□□□□ -0.83
UBE4B-209ENST00000487244 TNS2Q63HR2 1409 aa9.87□□□□□ -0.83
UBE4B-209ENST00000487244 TNNT2P45379 298 aaPredicted RBP9.86□□□□□ -0.83
UBE4B-209ENST00000487244 PDE3BQ13370 1112 aa9.86□□□□□ -0.83
UBE4B-209ENST00000487244 HSP90AB2PQ58FF8 381 aa9.86□□□□□ -0.83
UBE4B-209ENST00000487244 FLT4P35916 1363 aa9.86□□□□□ -0.83
UBE4B-209ENST00000487244 OVOS2A0A0G2JMS6 1433 aa9.85□□□□□ -0.83
UBE4B-209ENST00000487244 TRIM37O94972 964 aa9.85□□□□□ -0.83
UBE4B-209ENST00000487244 DDB1Q16531 1140 aa9.85□□□□□ -0.83
UBE4B-209ENST00000487244 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
UBE4B-209ENST00000487244 USHBP1Q8N6Y0 703 aa9.85□□□□□ -0.83
UBE4B-209ENST00000487244 MARCH10Q8NA82 808 aaPredicted RBP9.85□□□□□ -0.83
UBE4B-209ENST00000487244 KAT6BQ8WYB5 2073 aa9.85□□□□□ -0.83
UBE4B-209ENST00000487244 MEGF6O75095 1541 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms