RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 SKIP12755 728 aa9.87□□□□□ -0.83
RTFDC1-209ENST00000487211 PDIA4P13667 645 aaKnown RBP9.87□□□□□ -0.83
RTFDC1-209ENST00000487211 SH3BP2P78314 561 aa9.87□□□□□ -0.83
RTFDC1-209ENST00000487211 SLFNL1Q499Z3 407 aa9.87□□□□□ -0.83
RTFDC1-209ENST00000487211 PPP1R18Q6NYC8 613 aa9.87□□□□□ -0.83
RTFDC1-209ENST00000487211 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.87□□□□□ -0.83
RTFDC1-209ENST00000487211 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
RTFDC1-209ENST00000487211 PLA2G2CQ5R387 149 aa9.86□□□□□ -0.83
RTFDC1-209ENST00000487211 KIAA0556O60303 1618 aa9.85□□□□□ -0.83
RTFDC1-209ENST00000487211 TRIM32Q13049 653 aa9.85□□□□□ -0.83
RTFDC1-209ENST00000487211 ERFEQ4G0M1 354 aa9.85□□□□□ -0.83
RTFDC1-209ENST00000487211 CDCA8Q53HL2 280 aa9.85□□□□□ -0.83
RTFDC1-209ENST00000487211 RNF135Q8IUD6 432 aa9.85□□□□□ -0.83
RTFDC1-209ENST00000487211 RETREG2Q8NC44 543 aa9.85□□□□□ -0.83
RTFDC1-209ENST00000487211 NFATC2IPQ8NCF5 419 aa9.85□□□□□ -0.83
RTFDC1-209ENST00000487211 FAM174AQ8TBP5 190 aa9.85□□□□□ -0.83
RTFDC1-209ENST00000487211 UACAQ9BZF9 1416 aa9.84□□□□□ -0.83
RTFDC1-209ENST00000487211 HSPA2P54652 639 aa9.84□□□□□ -0.83
RTFDC1-209ENST00000487211 SRPK2P78362 688 aaKnown RBP9.84□□□□□ -0.83
RTFDC1-209ENST00000487211 MMRN1Q13201 1228 aa9.84□□□□□ -0.83
RTFDC1-209ENST00000487211 FHOD3Q2V2M9 1422 aa9.83□□□□□ -0.84
RTFDC1-209ENST00000487211 SLC10A4Q96EP9 437 aa9.83□□□□□ -0.84
RTFDC1-209ENST00000487211 PLB1Q6P1J6 1458 aa9.83□□□□□ -0.84
RTFDC1-209ENST00000487211 ADAMTSL3P82987 1691 aa9.83□□□□□ -0.84
RTFDC1-209ENST00000487211 USP17L5A8MUK1 530 aa9.82□□□□□ -0.84
RTFDC1-209ENST00000487211 DEPDC4Q8N2C3 294 aa9.82□□□□□ -0.84
RTFDC1-209ENST00000487211 PHTF2Q8N3S3 785 aa9.82□□□□□ -0.84
RTFDC1-209ENST00000487211 ARHGAP35Q9NRY4 1499 aa9.82□□□□□ -0.84
RTFDC1-209ENST00000487211 SAMD9Q5K651 1589 aa9.82□□□□□ -0.84
RTFDC1-209ENST00000487211 USP17L3A6NCW0 530 aa9.81□□□□□ -0.84
RTFDC1-209ENST00000487211 USP17L4A6NCW7 530 aa9.81□□□□□ -0.84
RTFDC1-209ENST00000487211 USP17L2Q6R6M4 530 aa9.81□□□□□ -0.84
RTFDC1-209ENST00000487211 USP17L1Q7RTZ2 530 aa9.81□□□□□ -0.84
RTFDC1-209ENST00000487211 PLPP7Q8NBV4 271 aa9.81□□□□□ -0.84
RTFDC1-209ENST00000487211 VRTNQ9H8Y1 702 aa9.81□□□□□ -0.84
RTFDC1-209ENST00000487211 ADCY10Q96PN6 1610 aa9.81□□□□□ -0.84
RTFDC1-209ENST00000487211 UHRF1BP1LA0JNW5 1464 aa9.8□□□□□ -0.84
RTFDC1-209ENST00000487211 RPIAP49247 311 aa9.8□□□□□ -0.84
RTFDC1-209ENST00000487211 SKOR1P84550 965 aa9.8□□□□□ -0.84
RTFDC1-209ENST00000487211 IFFO2Q5TF58 517 aa9.8□□□□□ -0.84
RTFDC1-209ENST00000487211 C1QTNF2Q9BXJ5 285 aa9.8□□□□□ -0.84
RTFDC1-209ENST00000487211 GIGYF1O75420 1035 aaPredicted RBP9.79□□□□□ -0.84
RTFDC1-209ENST00000487211 CSB-PGBD3P0DP91 1061 aa9.79□□□□□ -0.84
RTFDC1-209ENST00000487211 WNT7BP56706 349 aa9.79□□□□□ -0.84
RTFDC1-209ENST00000487211 KANK4Q5T7N3 995 aaPredicted RBP9.79□□□□□ -0.84
RTFDC1-209ENST00000487211 PLEKHM2Q8IWE5 1019 aa9.79□□□□□ -0.84
RTFDC1-209ENST00000487211 CD2BP2O95400 341 aaKnown RBP9.78□□□□□ -0.84
RTFDC1-209ENST00000487211 NCOA4Q13772 614 aa9.78□□□□□ -0.84
RTFDC1-209ENST00000487211 NBPF20Q3BBV1 942 aa9.78□□□□□ -0.84
RTFDC1-209ENST00000487211 TRMT44Q8IYL2 757 aaKnown RBP9.78□□□□□ -0.84
RTFDC1-209ENST00000487211 TRAIPQ9BWF2 469 aa9.78□□□□□ -0.84
RTFDC1-209ENST00000487211 CLIP1P30622 1438 aa9.78□□□□□ -0.84
RTFDC1-209ENST00000487211 EFCAB5A4FU69 1503 aa9.77□□□□□ -0.84
RTFDC1-209ENST00000487211 ABCC2Q92887 1545 aa9.77□□□□□ -0.84
RTFDC1-209ENST00000487211 ABCA8O94911 1581 aa9.77□□□□□ -0.85
RTFDC1-209ENST00000487211 ATG7O95352 703 aa9.77□□□□□ -0.85
RTFDC1-209ENST00000487211 VARSP26640 1264 aaKnown RBP9.77□□□□□ -0.85
RTFDC1-209ENST00000487211 MAP7D1Q3KQU3 841 aa9.77□□□□□ -0.85
RTFDC1-209ENST00000487211 TSGA10IPQ3SY00 556 aa9.77□□□□□ -0.85
RTFDC1-209ENST00000487211 MKRN1Q9UHC7 482 aaKnown RBP9.77□□□□□ -0.85
RTFDC1-209ENST00000487211 CDV3Q9UKY7 258 aaKnown RBP9.77□□□□□ -0.85
RTFDC1-209ENST00000487211 DOLKQ9UPQ8 538 aa9.77□□□□□ -0.85
RTFDC1-209ENST00000487211 KDM5BQ9UGL1 1544 aa9.77□□□□□ -0.85
RTFDC1-209ENST00000487211 PDE4CQ08493 712 aa9.76□□□□□ -0.85
RTFDC1-209ENST00000487211 EML3Q32P44 896 aa9.76□□□□□ -0.85
RTFDC1-209ENST00000487211 RNF20Q5VTR2 975 aa9.76□□□□□ -0.85
RTFDC1-209ENST00000487211 LIAT1Q6ZQX7 453 aa9.76□□□□□ -0.85
RTFDC1-209ENST00000487211 EHBP1Q8NDI1 1231 aa9.76□□□□□ -0.85
RTFDC1-209ENST00000487211 CCDC85AQ96PX6 553 aaPredicted RBP9.76□□□□□ -0.85
RTFDC1-209ENST00000487211 CHIC2Q9UKJ5 165 aa9.76□□□□□ -0.85
RTFDC1-209ENST00000487211 ATP10BO94823 1461 aa9.76□□□□□ -0.85
RTFDC1-209ENST00000487211 CEP162Q5TB80 1403 aa9.75□□□□□ -0.85
RTFDC1-209ENST00000487211 LZTS3O60299 673 aaPredicted RBP9.75□□□□□ -0.85
RTFDC1-209ENST00000487211 RC3H1Q5TC82 1133 aaKnown RBP9.75□□□□□ -0.85
RTFDC1-209ENST00000487211 ASXL2Q76L83 1435 aa9.74□□□□□ -0.85
RTFDC1-209ENST00000487211 RAB15P59190 212 aa9.74□□□□□ -0.85
RTFDC1-209ENST00000487211 TRIM26Q12899 539 aaPredicted RBP9.74□□□□□ -0.85
RTFDC1-209ENST00000487211 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
RTFDC1-209ENST00000487211 TRAF7Q6Q0C0 670 aa9.74□□□□□ -0.85
RTFDC1-209ENST00000487211 KCTD15Q96SI1 283 aaPredicted RBP9.74□□□□□ -0.85
RTFDC1-209ENST00000487211 LTBP4Q8N2S1 1624 aa9.74□□□□□ -0.85
RTFDC1-209ENST00000487211 ESPNB1AK53 854 aa9.73□□□□□ -0.85
RTFDC1-209ENST00000487211 ARID5BQ14865 1188 aa9.73□□□□□ -0.85
RTFDC1-209ENST00000487211 VASH1Q7L8A9 365 aaPredicted RBP9.73□□□□□ -0.85
RTFDC1-209ENST00000487211 USTQ9Y2C2 406 aa9.73□□□□□ -0.85
RTFDC1-209ENST00000487211 STRCQ7RTU9 1775 aa9.73□□□□□ -0.85
RTFDC1-209ENST00000487211 FMN1Q68DA7 1419 aa9.73□□□□□ -0.85
RTFDC1-209ENST00000487211 NUP153P49790 1475 aaKnown RBP9.72□□□□□ -0.85
RTFDC1-209ENST00000487211 ATP5J2-PTCD1G3V325 749 aa9.72□□□□□ -0.85
RTFDC1-209ENST00000487211 RASA1P20936 1047 aa9.72□□□□□ -0.85
RTFDC1-209ENST00000487211 SLC19A1P41440 591 aa9.72□□□□□ -0.85
RTFDC1-209ENST00000487211 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
RTFDC1-209ENST00000487211 SEPT12Q8IYM1 358 aa9.72□□□□□ -0.85
RTFDC1-209ENST00000487211 EMID1Q96A84 441 aaPredicted RBP9.72□□□□□ -0.85
RTFDC1-209ENST00000487211 PCDHB11Q9Y5F2 797 aa9.72□□□□□ -0.85
RTFDC1-209ENST00000487211 CARNS1A5YM72 827 aa9.71□□□□□ -0.86
RTFDC1-209ENST00000487211 CDCA7Q9BWT1 371 aaPredicted RBP9.71□□□□□ -0.86
RTFDC1-209ENST00000487211 NOD1Q9Y239 953 aa9.71□□□□□ -0.86
RTFDC1-209ENST00000487211 MAP4K5Q9Y4K4 846 aa9.71□□□□□ -0.86
RTFDC1-209ENST00000487211 RAPGEF6Q8TEU7 1601 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 187.9 ms