RNA–Protein interactions for RNA: ENST00000486593.5

LAMP2-204, Transcript of lysosomal associated membrane protein 2, humanhuman

TSL 5

Gene LAMP2, Length 1,069 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-204ENST00000486593 PTCH1Q13635 1447 aa11.71□□□□□ -0.53
LAMP2-204ENST00000486593 PTGDRQ13258 359 aa11.71□□□□□ -0.53
LAMP2-204ENST00000486593 ANKK1Q8NFD2 765 aa11.71□□□□□ -0.53
LAMP2-204ENST00000486593 TATDN2Q93075 761 aa11.71□□□□□ -0.53
LAMP2-204ENST00000486593 TRAK1Q9UPV9 953 aa11.71□□□□□ -0.53
LAMP2-204ENST00000486593 NPHP4O75161 1426 aaPredicted RBP11.7□□□□□ -0.54
LAMP2-204ENST00000486593 TMEM132EQ6IEE7 984 aa11.7□□□□□ -0.54
LAMP2-204ENST00000486593 PLA2G2EQ9NZK7 142 aa11.7□□□□□ -0.54
LAMP2-204ENST00000486593 XRN1Q8IZH2 1706 aaKnown RBP11.69□□□□□ -0.54
LAMP2-204ENST00000486593 METP08581 1390 aa11.69□□□□□ -0.54
LAMP2-204ENST00000486593 RBM26Q5T8P6 1007 aaKnown RBP11.69□□□□□ -0.54
LAMP2-204ENST00000486593 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
LAMP2-204ENST00000486593 RBM27Q9P2N5 1060 aaKnown RBP11.69□□□□□ -0.54
LAMP2-204ENST00000486593 PNMA3Q9UL41 463 aa11.69□□□□□ -0.54
LAMP2-204ENST00000486593 LMTK3Q96Q04 1460 aa11.69□□□□□ -0.54
LAMP2-204ENST00000486593 NINLQ9Y2I6 1382 aa11.68□□□□□ -0.54
LAMP2-204ENST00000486593 EVC2Q86UK5 1308 aa11.68□□□□□ -0.54
LAMP2-204ENST00000486593 POGKQ9P215 609 aa11.68□□□□□ -0.54
LAMP2-204ENST00000486593 ADGRB2O60241 1585 aa11.67□□□□□ -0.54
LAMP2-204ENST00000486593 DDX10Q13206 875 aaKnown RBP11.67□□□□□ -0.54
LAMP2-204ENST00000486593 WBP1LQ9NX94 342 aa11.67□□□□□ -0.54
LAMP2-204ENST00000486593 CHD2O14647 1828 aaKnown RBP11.67□□□□□ -0.54
LAMP2-204ENST00000486593 NWD1Q149M9 1564 aa11.67□□□□□ -0.54
LAMP2-204ENST00000486593 DISP3Q9P2K9 1392 aa11.67□□□□□ -0.54
LAMP2-204ENST00000486593 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
LAMP2-204ENST00000486593 ATAD2Q6PL18 1390 aa11.66□□□□□ -0.54
LAMP2-204ENST00000486593 C11orf95C9JLR9 678 aaPredicted RBP11.65□□□□□ -0.54
LAMP2-204ENST00000486593 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
LAMP2-204ENST00000486593 PRAM1Q96QH2 718 aa11.65□□□□□ -0.54
LAMP2-204ENST00000486593 STK26Q9P289 416 aa11.65□□□□□ -0.54
LAMP2-204ENST00000486593 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
LAMP2-204ENST00000486593 FAM161AQ3B820 660 aa11.64□□□□□ -0.55
LAMP2-204ENST00000486593 SLC26A8Q96RN1 970 aa11.64□□□□□ -0.55
LAMP2-204ENST00000486593 TULP4Q9NRJ4 1543 aa11.64□□□□□ -0.55
LAMP2-204ENST00000486593 KTN1Q86UP2 1357 aaKnown RBP11.64□□□□□ -0.55
LAMP2-204ENST00000486593 NKTRP30414 1462 aaKnown RBP11.63□□□□□ -0.55
LAMP2-204ENST00000486593 MYOM1P52179 1685 aa11.63□□□□□ -0.55
LAMP2-204ENST00000486593 GPR37O15354 613 aa11.63□□□□□ -0.55
LAMP2-204ENST00000486593 EYA1Q99502 592 aa11.63□□□□□ -0.55
LAMP2-204ENST00000486593 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.63□□□□□ -0.55
LAMP2-204ENST00000486593 PTPRUQ92729 1446 aa11.62□□□□□ -0.55
LAMP2-204ENST00000486593 ANP32CO43423 234 aa11.62□□□□□ -0.55
LAMP2-204ENST00000486593 AMOTL2Q9Y2J4 779 aa11.62□□□□□ -0.55
LAMP2-204ENST00000486593 LRCH3Q96II8 777 aa11.61□□□□□ -0.55
LAMP2-204ENST00000486593 POLR3GLQ9BT43 218 aa11.61□□□□□ -0.55
LAMP2-204ENST00000486593 HPS5Q9UPZ3 1129 aa11.61□□□□□ -0.55
LAMP2-204ENST00000486593 ROBO2Q9HCK4 1378 aa11.61□□□□□ -0.55
LAMP2-204ENST00000486593 KCNA6P17658 529 aa11.6□□□□□ -0.55
LAMP2-204ENST00000486593 NCOA3Q9Y6Q9 1424 aa11.6□□□□□ -0.55
LAMP2-204ENST00000486593 STRCQ7RTU9 1775 aa11.59□□□□□ -0.55
LAMP2-204ENST00000486593 FECHP22830 423 aa11.59□□□□□ -0.55
LAMP2-204ENST00000486593 TSR3Q9UJK0 312 aaKnown RBP11.59□□□□□ -0.55
LAMP2-204ENST00000486593 ADGRG1Q9Y653 693 aa11.59□□□□□ -0.55
LAMP2-204ENST00000486593 ITSN1Q15811 1721 aa11.59□□□□□ -0.55
LAMP2-204ENST00000486593 CDC42BPGQ6DT37 1551 aa11.58□□□□□ -0.55
LAMP2-204ENST00000486593 ATP7BP35670 1465 aa11.58□□□□□ -0.56
LAMP2-204ENST00000486593 USP32Q8NFA0 1604 aa11.58□□□□□ -0.56
LAMP2-204ENST00000486593 SRPK2P78362 688 aaKnown RBP11.58□□□□□ -0.56
LAMP2-204ENST00000486593 MINK1Q8N4C8 1332 aaPredicted RBP11.58□□□□□ -0.56
LAMP2-204ENST00000486593 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.57□□□□□ -0.56
LAMP2-204ENST00000486593 ANKRD36BQ8N2N9 1353 aa11.57□□□□□ -0.56
LAMP2-204ENST00000486593 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
LAMP2-204ENST00000486593 PLEKHH1Q9ULM0 1364 aa11.57□□□□□ -0.56
LAMP2-204ENST00000486593 WASLO00401 505 aaPredicted RBP11.57□□□□□ -0.56
LAMP2-204ENST00000486593 FCHSD2O94868 740 aa11.57□□□□□ -0.56
LAMP2-204ENST00000486593 ANKARQ7Z5J8 1434 aa11.57□□□□□ -0.56
LAMP2-204ENST00000486593 SAFB2Q14151 953 aaKnown RBP eCLIP11.56□□□□□ -0.56
LAMP2-204ENST00000486593 SWT1Q5T5J6 900 aaKnown RBP11.56□□□□□ -0.56
LAMP2-204ENST00000486593 WAPLQ7Z5K2 1190 aa11.56□□□□□ -0.56
LAMP2-204ENST00000486593 CDK19Q9BWU1 502 aa11.56□□□□□ -0.56
LAMP2-204ENST00000486593 ADGRL3Q9HAR2 1447 aa11.56□□□□□ -0.56
LAMP2-204ENST00000486593 CCER2I3L3R5 266 aa11.55□□□□□ -0.56
LAMP2-204ENST00000486593 PANK3Q9H999 370 aa11.55□□□□□ -0.56
LAMP2-204ENST00000486593 TERF2IPQ9NYB0 399 aa11.55□□□□□ -0.56
LAMP2-204ENST00000486593 KNSTRNQ9Y448 316 aa11.55□□□□□ -0.56
LAMP2-204ENST00000486593 TOPAZ1Q8N9V7 1692 aa11.55□□□□□ -0.56
LAMP2-204ENST00000486593 NALCNQ8IZF0 1738 aa11.55□□□□□ -0.56
LAMP2-204ENST00000486593 FMN2Q9NZ56 1722 aa11.55□□□□□ -0.56
LAMP2-204ENST00000486593 NSD2O96028 1365 aa11.54□□□□□ -0.56
LAMP2-204ENST00000486593 DCCP43146 1447 aa11.54□□□□□ -0.56
LAMP2-204ENST00000486593 HSPA2P54652 639 aa11.54□□□□□ -0.56
LAMP2-204ENST00000486593 RALBP1Q15311 655 aa11.54□□□□□ -0.56
LAMP2-204ENST00000486593 PER1O15534 1290 aaPredicted RBP11.53□□□□□ -0.56
LAMP2-204ENST00000486593 HDGFL2Q7Z4V5 671 aaPredicted RBP11.53□□□□□ -0.56
LAMP2-204ENST00000486593 TMC1Q8TDI8 760 aa11.53□□□□□ -0.56
LAMP2-204ENST00000486593 PPP4CP60510 307 aa11.52□□□□□ -0.57
LAMP2-204ENST00000486593 SMYD5Q6GMV2 418 aa11.52□□□□□ -0.57
LAMP2-204ENST00000486593 PRKRIP1Q9H875 184 aaPredicted RBP11.52□□□□□ -0.57
LAMP2-204ENST00000486593 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.57
LAMP2-204ENST00000486593 ITGBL1O95965 494 aaPredicted RBP11.51□□□□□ -0.57
LAMP2-204ENST00000486593 HIC1Q14526 733 aa11.51□□□□□ -0.57
LAMP2-204ENST00000486593 CGNL1Q0VF96 1302 aa11.51□□□□□ -0.57
LAMP2-204ENST00000486593 AKAP12Q02952 1782 aa11.51□□□□□ -0.57
LAMP2-204ENST00000486593 MON2Q7Z3U7 1717 aa11.5□□□□□ -0.57
LAMP2-204ENST00000486593 IFFO2Q5TF58 517 aa11.5□□□□□ -0.57
LAMP2-204ENST00000486593 NYAP1Q6ZVC0 841 aa11.5□□□□□ -0.57
LAMP2-204ENST00000486593 NUDT16Q96DE0 195 aaKnown RBP11.5□□□□□ -0.57
LAMP2-204ENST00000486593 BRD4O60885 1362 aaPredicted RBP11.5□□□□□ -0.57
LAMP2-204ENST00000486593 PARD3Q8TEW0 1356 aa11.5□□□□□ -0.57
LAMP2-204ENST00000486593 RCCD1A6NED2 376 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms