RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 MAP3K5Q99683 1374 aa12.53□□□□□ -0.4
DDX39B-221ENST00000484566 OVOS2A0A0G2JMS6 1433 aa12.53□□□□□ -0.4
DDX39B-221ENST00000484566 OVOS2A0A0J9YW53 1432 aa12.53□□□□□ -0.4
DDX39B-221ENST00000484566 OVOS2Q6IE36 1432 aa12.53□□□□□ -0.4
DDX39B-221ENST00000484566 ARHGEF28Q8N1W1 1705 aaKnown RBP12.52□□□□□ -0.41
DDX39B-221ENST00000484566 IER5LQ5T953 404 aa12.52□□□□□ -0.41
DDX39B-221ENST00000484566 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
DDX39B-221ENST00000484566 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.41
DDX39B-221ENST00000484566 PELP1Q8IZL8 1130 aaKnown RBP12.52□□□□□ -0.41
DDX39B-221ENST00000484566 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-221ENST00000484566 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-221ENST00000484566 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.41
DDX39B-221ENST00000484566 TOPAZ1Q8N9V7 1692 aa12.51□□□□□ -0.41
DDX39B-221ENST00000484566 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
DDX39B-221ENST00000484566 NUDT16Q96DE0 195 aaKnown RBP12.51□□□□□ -0.41
DDX39B-221ENST00000484566 CPDO75976 1380 aa12.51□□□□□ -0.41
DDX39B-221ENST00000484566 ATP10DQ9P241 1426 aa12.51□□□□□ -0.41
DDX39B-221ENST00000484566 SEC24BO95487 1268 aa12.5□□□□□ -0.41
DDX39B-221ENST00000484566 WWC3Q9ULE0 1092 aa12.5□□□□□ -0.41
DDX39B-221ENST00000484566 SBF2Q86WG5 1849 aa12.49□□□□□ -0.41
DDX39B-221ENST00000484566 POLR3AO14802 1390 aaPredicted RBP12.49□□□□□ -0.41
DDX39B-221ENST00000484566 JMYQ8N9B5 988 aa12.49□□□□□ -0.41
DDX39B-221ENST00000484566 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
DDX39B-221ENST00000484566 LRRC37A3O60309 1634 aa12.48□□□□□ -0.41
DDX39B-221ENST00000484566 COL5A2P05997 1499 aaPredicted RBP12.48□□□□□ -0.41
DDX39B-221ENST00000484566 CRB1P82279 1406 aa12.48□□□□□ -0.41
DDX39B-221ENST00000484566 USP19O94966 1318 aa12.48□□□□□ -0.41
DDX39B-221ENST00000484566 ABTB2Q8N961 1025 aa12.48□□□□□ -0.41
DDX39B-221ENST00000484566 ARXQ96QS3 562 aa12.48□□□□□ -0.41
DDX39B-221ENST00000484566 METRNQ9UJH8 293 aa12.48□□□□□ -0.41
DDX39B-221ENST00000484566 ACEP12821 1306 aa12.47□□□□□ -0.41
DDX39B-221ENST00000484566 PLSCR1O15162 318 aa12.47□□□□□ -0.41
DDX39B-221ENST00000484566 MTFR1LQ9H019 292 aa12.47□□□□□ -0.41
DDX39B-221ENST00000484566 KDM2AQ9Y2K7 1162 aa12.47□□□□□ -0.41
DDX39B-221ENST00000484566 NLRP13Q86W25 1043 aa12.46□□□□□ -0.41
DDX39B-221ENST00000484566 DCAF11Q8TEB1 546 aa12.46□□□□□ -0.41
DDX39B-221ENST00000484566 AKAP12Q02952 1782 aa12.46□□□□□ -0.42
DDX39B-221ENST00000484566 AATKQ6ZMQ8 1374 aa12.45□□□□□ -0.42
DDX39B-221ENST00000484566 DDB1Q16531 1140 aa12.45□□□□□ -0.42
DDX39B-221ENST00000484566 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
DDX39B-221ENST00000484566 STAC3Q96MF2 364 aa12.45□□□□□ -0.42
DDX39B-221ENST00000484566 CDK19Q9BWU1 502 aa12.45□□□□□ -0.42
DDX39B-221ENST00000484566 WNK3Q9BYP7 1800 aa12.45□□□□□ -0.42
DDX39B-221ENST00000484566 ZBTB7CA1YPR0 619 aa12.44□□□□□ -0.42
DDX39B-221ENST00000484566 SOX12O15370 315 aa12.44□□□□□ -0.42
DDX39B-221ENST00000484566 GCP02774 474 aa12.44□□□□□ -0.42
DDX39B-221ENST00000484566 PLCG2P16885 1265 aa12.44□□□□□ -0.42
DDX39B-221ENST00000484566 KLRG1Q96E93 195 aa12.44□□□□□ -0.42
DDX39B-221ENST00000484566 STK32BQ9NY57 414 aa12.44□□□□□ -0.42
DDX39B-221ENST00000484566 WDR90Q96KV7 1748 aa12.44□□□□□ -0.42
DDX39B-221ENST00000484566 PLEKHG3A1L390 1219 aa12.43□□□□□ -0.42
DDX39B-221ENST00000484566 EFCAB3Q8N7B9 438 aa12.43□□□□□ -0.42
DDX39B-221ENST00000484566 GRIN3BO60391 1043 aa12.42□□□□□ -0.42
DDX39B-221ENST00000484566 TOM1L2Q6ZVM7 507 aa12.42□□□□□ -0.42
DDX39B-221ENST00000484566 OCEL1Q9H607 264 aa12.42□□□□□ -0.42
DDX39B-221ENST00000484566 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.423e-20■□□□□ 9.1
DDX39B-221ENST00000484566 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-221ENST00000484566 KIF3CO14782 793 aa12.41□□□□□ -0.42
DDX39B-221ENST00000484566 PPIP5K1Q6PFW1 1433 aa12.41□□□□□ -0.42
DDX39B-221ENST00000484566 ZNF526Q8TF50 670 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-221ENST00000484566 CDCA7Q9BWT1 371 aaPredicted RBP12.41□□□□□ -0.42
DDX39B-221ENST00000484566 BCL9O00512 1426 aa12.4□□□□□ -0.42
DDX39B-221ENST00000484566 SLIT3O75094 1523 aa12.4□□□□□ -0.42
DDX39B-221ENST00000484566 SRPK2P78362 688 aaKnown RBP12.39□□□□□ -0.43
DDX39B-221ENST00000484566 ADCY9O60503 1353 aa12.39□□□□□ -0.43
DDX39B-221ENST00000484566 KIAA1210Q9ULL0 1709 aa12.38□□□□□ -0.43
DDX39B-221ENST00000484566 YBX3P16989 372 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDX39B-221ENST00000484566 NLRP6P59044 892 aa12.38□□□□□ -0.43
DDX39B-221ENST00000484566 SLC15A2Q16348 729 aa12.38□□□□□ -0.43
DDX39B-221ENST00000484566 TXNRD1Q16881 649 aa12.38□□□□□ -0.43
DDX39B-221ENST00000484566 PTF1AQ7RTS3 328 aa12.38□□□□□ -0.43
DDX39B-221ENST00000484566 RAB3GAP2Q9H2M9 1393 aa12.38□□□□□ -0.43
DDX39B-221ENST00000484566 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
DDX39B-221ENST00000484566 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
DDX39B-221ENST00000484566 IRX5P78411 483 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-221ENST00000484566 MARCH10Q8NA82 808 aaPredicted RBP12.37□□□□□ -0.43
DDX39B-221ENST00000484566 USP6P35125 1406 aa12.37□□□□□ -0.43
DDX39B-221ENST00000484566 CPSF1Q10570 1443 aaKnown RBP12.37□□□□□ -0.43
DDX39B-221ENST00000484566 COL18A1P39060 1754 aa12.36□□□□□ -0.43
DDX39B-221ENST00000484566 CSB-PGBD3P0DP91 1061 aa12.36□□□□□ -0.43
DDX39B-221ENST00000484566 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
DDX39B-221ENST00000484566 PIK3C2AO00443 1686 aa12.35□□□□□ -0.43
DDX39B-221ENST00000484566 NHSQ6T4R5 1651 aa12.35□□□□□ -0.43
DDX39B-221ENST00000484566 TOMM70O94826 608 aa12.34□□□□□ -0.43
DDX39B-221ENST00000484566 FAM161AQ3B820 660 aa12.34□□□□□ -0.43
DDX39B-221ENST00000484566 KAT6BQ8WYB5 2073 aa12.34□□□□□ -0.43
DDX39B-221ENST00000484566 CENPJQ9HC77 1338 aaPredicted RBP12.34□□□□□ -0.43
DDX39B-221ENST00000484566 RGPD5Q99666 1765 aa12.33□□□□□ -0.44
DDX39B-221ENST00000484566 CCDC7Q96M83 1385 aa12.33□□□□□ -0.44
DDX39B-221ENST00000484566 EXOC5O00471 708 aa12.33□□□□□ -0.44
DDX39B-221ENST00000484566 HTRA3P83110 453 aa12.33□□□□□ -0.44
DDX39B-221ENST00000484566 NLGN2Q8NFZ4 835 aa12.33□□□□□ -0.44
DDX39B-221ENST00000484566 CARD10Q9BWT7 1032 aa12.33□□□□□ -0.44
DDX39B-221ENST00000484566 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
DDX39B-221ENST00000484566 PAPPAQ13219 1627 aa12.33□□□□□ -0.44
DDX39B-221ENST00000484566 COL24A1Q17RW2 1714 aa12.32□□□□□ -0.44
DDX39B-221ENST00000484566 G3V3G9 751 aa12.32□□□□□ -0.44
DDX39B-221ENST00000484566 KCNH5Q8NCM2 988 aa12.32□□□□□ -0.44
DDX39B-221ENST00000484566 RYDENQ9NUL5 291 aaKnown RBP12.32□□□□□ -0.44
DDX39B-221ENST00000484566 TRPM1Q7Z4N2 1603 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms