RNA–Protein interactions for RNA: ENST00000484370.5

FGFR1-221, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-221ENST00000484370 PDE3BQ13370 1112 aa18.24■□□□□ 0.51
FGFR1-221ENST00000484370 KRT27Q7Z3Y8 459 aa18.23■□□□□ 0.51
FGFR1-221ENST00000484370 KDRP35968 1356 aa18.22■□□□□ 0.51
FGFR1-221ENST00000484370 ZCRB1Q8TBF4 217 aaKnown RBP18.22■□□□□ 0.51
FGFR1-221ENST00000484370 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
FGFR1-221ENST00000484370 LRRC37A3O60309 1634 aa18.22■□□□□ 0.51
FGFR1-221ENST00000484370 OVOS2A0A0G2JMS6 1433 aa18.22■□□□□ 0.51
FGFR1-221ENST00000484370 FAM182BQ5T319 152 aa18.2■□□□□ 0.5
FGFR1-221ENST00000484370 RSPH6AQ9H0K4 717 aa18.2■□□□□ 0.5
FGFR1-221ENST00000484370 WDR43Q15061 677 aaKnown RBP eCLIP18.19■□□□□ 0.5
FGFR1-221ENST00000484370 PLEKHO1Q53GL0 409 aaPredicted RBP18.19■□□□□ 0.5
FGFR1-221ENST00000484370 TNS2Q63HR2 1409 aa18.19■□□□□ 0.5
FGFR1-221ENST00000484370 DDX54Q8TDD1 881 aaKnown RBP18.19■□□□□ 0.5
FGFR1-221ENST00000484370 FCHSD2O94868 740 aa18.18■□□□□ 0.5
FGFR1-221ENST00000484370 PRKAR2BP31323 418 aa18.18■□□□□ 0.5
FGFR1-221ENST00000484370 MIER1Q8N108 512 aa18.18■□□□□ 0.5
FGFR1-221ENST00000484370 MARCH10Q8NA82 808 aaPredicted RBP18.18■□□□□ 0.5
FGFR1-221ENST00000484370 SPG7Q9UQ90 795 aa18.18■□□□□ 0.5
FGFR1-221ENST00000484370 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.17■□□□□ 0.5
FGFR1-221ENST00000484370 ADAMTS8Q9UP79 889 aa18.16■□□□□ 0.5
FGFR1-221ENST00000484370 PKD1L3Q7Z443 1732 aa18.15■□□□□ 0.5
FGFR1-221ENST00000484370 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
FGFR1-221ENST00000484370 AMOTQ4VCS5 1084 aa18.15■□□□□ 0.5
FGFR1-221ENST00000484370 CYP27B1O15528 508 aa18.14■□□□□ 0.49
FGFR1-221ENST00000484370 PNISRQ8TF01 805 aaKnown RBP18.14■□□□□ 0.49
FGFR1-221ENST00000484370 PHACTR3Q96KR7 559 aa18.14■□□□□ 0.49
FGFR1-221ENST00000484370 PCDH11XQ9BZA7 1347 aa18.14■□□□□ 0.49
FGFR1-221ENST00000484370 PCDH11YQ9BZA8 1340 aa18.14■□□□□ 0.49
FGFR1-221ENST00000484370 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
FGFR1-221ENST00000484370 MTHFSDQ2M296 383 aaKnown RBP18.13■□□□□ 0.49
FGFR1-221ENST00000484370 ZNF530Q6P9A1 599 aaPredicted RBP18.13■□□□□ 0.49
FGFR1-221ENST00000484370 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
FGFR1-221ENST00000484370 PLEKHG2Q9H7P9 1386 aa18.13■□□□□ 0.49
FGFR1-221ENST00000484370 PHKG2P15735 406 aa18.12■□□□□ 0.49
FGFR1-221ENST00000484370 FAM196AQ6ZSG2 479 aa18.12■□□□□ 0.49
FGFR1-221ENST00000484370 CCDC146Q8IYE0 955 aa18.12■□□□□ 0.49
FGFR1-221ENST00000484370 IFNL2Q8IZJ0 200 aa18.12■□□□□ 0.49
FGFR1-221ENST00000484370 PLEKHF1Q96S99 279 aa18.12■□□□□ 0.49
FGFR1-221ENST00000484370 NEFMP07197 916 aa18.11■□□□□ 0.49
FGFR1-221ENST00000484370 C1orf141Q5JVX7 400 aa18.1■□□□□ 0.49
FGFR1-221ENST00000484370 GAS2L2Q8NHY3 880 aa18.1■□□□□ 0.49
FGFR1-221ENST00000484370 MAPK8IP3Q9UPT6 1336 aa18.09■□□□□ 0.49
FGFR1-221ENST00000484370 FAM9BQ8IZU0 186 aa18.09■□□□□ 0.49
FGFR1-221ENST00000484370 ACSBG1Q96GR2 724 aa18.09■□□□□ 0.49
FGFR1-221ENST00000484370 KAT6BQ8WYB5 2073 aa18.09■□□□□ 0.49
FGFR1-221ENST00000484370 AKAP4Q5JQC9 854 aa18.08■□□□□ 0.48
FGFR1-221ENST00000484370 RUNDC1Q96C34 613 aa18.08■□□□□ 0.48
FGFR1-221ENST00000484370 NKX1-1Q15270 411 aaPredicted RBP18.07■□□□□ 0.48
FGFR1-221ENST00000484370 TRIM37O94972 964 aa18.06■□□□□ 0.48
FGFR1-221ENST00000484370 HSP90AB1P08238 724 aaKnown RBP18.06■□□□□ 0.48
FGFR1-221ENST00000484370 MPRIPQ6WCQ1 1025 aa18.06■□□□□ 0.48
FGFR1-221ENST00000484370 BCL9O00512 1426 aa18.06■□□□□ 0.48
FGFR1-221ENST00000484370 KCNQ2O43526 872 aa18.05■□□□□ 0.48
FGFR1-221ENST00000484370 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
FGFR1-221ENST00000484370 GNAT3A8MTJ3 354 aa18.04■□□□□ 0.48
FGFR1-221ENST00000484370 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
FGFR1-221ENST00000484370 NFE2L2Q16236 605 aa18.04■□□□□ 0.48
FGFR1-221ENST00000484370 PTF1AQ7RTS3 328 aa18.04■□□□□ 0.48
FGFR1-221ENST00000484370 SYTL4Q96C24 671 aaPredicted RBP18.04■□□□□ 0.48
FGFR1-221ENST00000484370 DCAF5Q96JK2 942 aa18.04■□□□□ 0.48
FGFR1-221ENST00000484370 LGR6Q9HBX8 967 aa18.04■□□□□ 0.48
FGFR1-221ENST00000484370 TMPOP42166 694 aaKnown RBP18.03■□□□□ 0.48
FGFR1-221ENST00000484370 UPF1Q92900 1129 aaKnown RBP eCLIP18.03■□□□□ 0.48
FGFR1-221ENST00000484370 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
FGFR1-221ENST00000484370 DOT1LQ8TEK3 1739 aa18.03■□□□□ 0.48
FGFR1-221ENST00000484370 MAP3K5Q99683 1374 aa18.03■□□□□ 0.48
FGFR1-221ENST00000484370 KDM6AO15550 1401 aaPredicted RBP18.02■□□□□ 0.48
FGFR1-221ENST00000484370 RNMTO43148 476 aaKnown RBP18.02■□□□□ 0.48
FGFR1-221ENST00000484370 NEUROD2Q15784 382 aa18.02■□□□□ 0.48
FGFR1-221ENST00000484370 TOGARAM1Q9Y4F4 1720 aa18.01■□□□□ 0.47
FGFR1-221ENST00000484370 SENP3-EIF4A1A0A087X0R7 540 aa18.01■□□□□ 0.47
FGFR1-221ENST00000484370 APAF1O14727 1248 aa18.01■□□□□ 0.47
FGFR1-221ENST00000484370 RIPK4P57078 832 aa18.01■□□□□ 0.47
FGFR1-221ENST00000484370 BCL11BQ9C0K0 894 aaPredicted RBP18.01■□□□□ 0.47
FGFR1-221ENST00000484370 DLG5Q8TDM6 1919 aa18■□□□□ 0.47
FGFR1-221ENST00000484370 ERVV-2B6SEH9 535 aa18■□□□□ 0.47
FGFR1-221ENST00000484370 DCTN1Q14203 1278 aa18■□□□□ 0.47
FGFR1-221ENST00000484370 IL17REQ8NFR9 667 aa18■□□□□ 0.47
FGFR1-221ENST00000484370 RTF1Q92541 710 aaKnown RBP18■□□□□ 0.47
FGFR1-221ENST00000484370 NHSQ6T4R5 1651 aa17.99■□□□□ 0.47
FGFR1-221ENST00000484370 SCN11AQ9UI33 1791 aa17.99■□□□□ 0.47
FGFR1-221ENST00000484370 CABP4P57796 275 aa17.99■□□□□ 0.47
FGFR1-221ENST00000484370 SF3B2Q13435 895 aaKnown RBP17.99■□□□□ 0.47
FGFR1-221ENST00000484370 MCM10Q7L590 875 aa17.99■□□□□ 0.47
FGFR1-221ENST00000484370 ITGB4P16144 1822 aa17.99■□□□□ 0.47
FGFR1-221ENST00000484370 VIRMAQ69YN4 1812 aaKnown RBP17.99■□□□□ 0.47
FGFR1-221ENST00000484370 HTATSF1O43719 755 aaKnown RBP17.98■□□□□ 0.47
FGFR1-221ENST00000484370 APBA3O96018 575 aa17.98■□□□□ 0.47
FGFR1-221ENST00000484370 TMOD3Q9NYL9 352 aa17.98■□□□□ 0.47
FGFR1-221ENST00000484370 CCDC125Q86Z20 511 aa17.97■□□□□ 0.47
FGFR1-221ENST00000484370 NFATC2IPQ8NCF5 419 aa17.97■□□□□ 0.47
FGFR1-221ENST00000484370 PIGBQ92521 554 aa17.97■□□□□ 0.47
FGFR1-221ENST00000484370 TNS1Q9HBL0 1735 aaKnown RBP17.96■□□□□ 0.47
FGFR1-221ENST00000484370 THUMPD2Q9BTF0 503 aaKnown RBP17.96■□□□□ 0.47
FGFR1-221ENST00000484370 TEFQ10587 303 aa17.95■□□□□ 0.46
FGFR1-221ENST00000484370 DEFB132Q7Z7B7 95 aa17.95■□□□□ 0.46
FGFR1-221ENST00000484370 SLC52A2Q9HAB3 445 aa17.95■□□□□ 0.46
FGFR1-221ENST00000484370 ADAMTS7Q9UKP4 1686 aa17.95■□□□□ 0.46
FGFR1-221ENST00000484370 BTAF1O14981 1849 aa17.95■□□□□ 0.46
FGFR1-221ENST00000484370 BAG6P46379 1132 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms