RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 MRPL14Q6P1L8 145 aaKnown RBP10.47□□□□□ -0.73
RIF1-210ENST00000484077 TRIM46Q7Z4K8 759 aa10.47□□□□□ -0.73
RIF1-210ENST00000484077 GRIN2AQ12879 1464 aa10.47□□□□□ -0.73
RIF1-210ENST00000484077 ESPNB1AK53 854 aa10.46□□□□□ -0.73
RIF1-210ENST00000484077 GPR37L1O60883 481 aa10.46□□□□□ -0.73
RIF1-210ENST00000484077 ARHGEF11O15085 1522 aa10.46□□□□□ -0.74
RIF1-210ENST00000484077 CEP170Q5SW79 1584 aa10.46□□□□□ -0.74
RIF1-210ENST00000484077 PPP1R26Q5T8A7 1209 aaPredicted RBP10.45□□□□□ -0.74
RIF1-210ENST00000484077 MEIOBQ8N635 442 aa10.45□□□□□ -0.74
RIF1-210ENST00000484077 ZFAND3Q9H8U3 227 aa10.45□□□□□ -0.74
RIF1-210ENST00000484077 RUSC2Q8N2Y8 1516 aa10.44□□□□□ -0.74
RIF1-210ENST00000484077 FHAD1B1AJZ9 1412 aa10.44□□□□□ -0.74
RIF1-210ENST00000484077 KIF27Q86VH2 1401 aa10.44□□□□□ -0.74
RIF1-210ENST00000484077 UPP2O95045 317 aa10.44□□□□□ -0.74
RIF1-210ENST00000484077 BMP1P13497 986 aa10.43□□□□□ -0.74
RIF1-210ENST00000484077 MCM6Q14566 821 aa10.43□□□□□ -0.74
RIF1-210ENST00000484077 RNF20Q5VTR2 975 aa10.43□□□□□ -0.74
RIF1-210ENST00000484077 Q6ZVU0 165 aa10.42□□□□□ -0.74
RIF1-210ENST00000484077 CHMP7Q8WUX9 453 aaPredicted RBP10.42□□□□□ -0.74
RIF1-210ENST00000484077 TSEN34Q9BSV6 310 aaKnown RBP10.42□□□□□ -0.74
RIF1-210ENST00000484077 PCDHB9Q9Y5E1 797 aa10.42□□□□□ -0.74
RIF1-210ENST00000484077 FLIIQ13045 1269 aa10.41□□□□□ -0.74
RIF1-210ENST00000484077 ZFP42Q96MM3 310 aa10.41□□□□□ -0.74
RIF1-210ENST00000484077 TBC1D2BQ9UPU7 963 aa10.41□□□□□ -0.74
RIF1-210ENST00000484077 NUP160Q12769 1436 aa10.41□□□□□ -0.74
RIF1-210ENST00000484077 SHROOM2Q13796 1616 aa10.4□□□□□ -0.74
RIF1-210ENST00000484077 LINC00528Q8N1L1 170 aa10.4□□□□□ -0.74
RIF1-210ENST00000484077 SNRPBP14678 240 aaKnown RBP10.39□□□□□ -0.75
RIF1-210ENST00000484077 ZNF775Q96BV0 537 aaPredicted RBP10.39□□□□□ -0.75
RIF1-210ENST00000484077 WASHC4Q2M389 1173 aa10.38□□□□□ -0.75
RIF1-210ENST00000484077 PURBQ96QR8 312 aaKnown RBP10.38□□□□□ -0.75
RIF1-210ENST00000484077 ARAP1Q96P48 1450 aa10.37□□□□□ -0.75
RIF1-210ENST00000484077 ERVH48-1M5A8F1 160 aa10.37□□□□□ -0.75
RIF1-210ENST00000484077 EIF4G2P78344 907 aaKnown RBP eCLIP10.37□□□□□ -0.75
RIF1-210ENST00000484077 GIGYF1O75420 1035 aaPredicted RBP10.36□□□□□ -0.75
RIF1-210ENST00000484077 IRF5Q13568 498 aa10.36□□□□□ -0.75
RIF1-210ENST00000484077 CTTNBP2Q8WZ74 1663 aa10.35□□□□□ -0.75
RIF1-210ENST00000484077 BMP2P12643 396 aa10.35□□□□□ -0.75
RIF1-210ENST00000484077 SOX11P35716 441 aa10.34□□□□□ -0.75
RIF1-210ENST00000484077 NPAS3Q8IXF0 933 aa10.34□□□□□ -0.75
RIF1-210ENST00000484077 ZNF784Q8NCA9 323 aaPredicted RBP10.34□□□□□ -0.75
RIF1-210ENST00000484077 GDPD2Q9HCC8 539 aa10.34□□□□□ -0.75
RIF1-210ENST00000484077 SPINT1O43278 529 aa10.33□□□□□ -0.76
RIF1-210ENST00000484077 CYB5RLQ6IPT4 315 aa10.33□□□□□ -0.76
RIF1-210ENST00000484077 WWC1Q8IX03 1113 aa10.33□□□□□ -0.76
RIF1-210ENST00000484077 ERCC6L2Q5T890 1561 aa10.33□□□□□ -0.76
RIF1-210ENST00000484077 IGF1RP08069 1367 aa10.32□□□□□ -0.76
RIF1-210ENST00000484077 LILRA1O75019 489 aa10.32□□□□□ -0.76
RIF1-210ENST00000484077 ADH1AP07327 375 aa10.32□□□□□ -0.76
RIF1-210ENST00000484077 RAB15P59190 212 aa10.32□□□□□ -0.76
RIF1-210ENST00000484077 CBLBQ13191 982 aa10.32□□□□□ -0.76
RIF1-210ENST00000484077 C6orf118Q5T5N4 469 aa10.32□□□□□ -0.76
RIF1-210ENST00000484077 TMPRSS4Q9NRS4 437 aa10.32□□□□□ -0.76
RIF1-210ENST00000484077 SOS2Q07890 1332 aaPredicted RBP10.32□□□□□ -0.76
RIF1-210ENST00000484077 ABL2P42684 1182 aa10.31□□□□□ -0.76
RIF1-210ENST00000484077 CEP126Q9P2H0 1117 aa10.31□□□□□ -0.76
RIF1-210ENST00000484077 COG6Q9Y2V7 657 aa10.31□□□□□ -0.76
RIF1-210ENST00000484077 IQGAP2Q13576 1575 aa10.31□□□□□ -0.76
RIF1-210ENST00000484077 RAD21O60216 631 aa10.3□□□□□ -0.76
RIF1-210ENST00000484077 ERVK-9P63128 1117 aa10.3□□□□□ -0.76
RIF1-210ENST00000484077 TREML4Q6UXN2 200 aa10.3□□□□□ -0.76
RIF1-210ENST00000484077 CARMIL1Q5VZK9 1371 aa10.29□□□□□ -0.76
RIF1-210ENST00000484077 TERTO14746 1132 aaKnown RBP10.29□□□□□ -0.76
RIF1-210ENST00000484077 MAN1A2O60476 641 aa10.29□□□□□ -0.76
RIF1-210ENST00000484077 CC2D2BQ6DHV5 1058 aa10.29□□□□□ -0.76
RIF1-210ENST00000484077 NXF1Q9UBU9 619 aaKnown RBP10.29□□□□□ -0.76
RIF1-210ENST00000484077 RAPGEF2Q9Y4G8 1499 aa10.29□□□□□ -0.76
RIF1-210ENST00000484077 KIAA0586Q9BVV6 1533 aa10.28□□□□□ -0.76
RIF1-210ENST00000484077 TTLL8A6PVC2 850 aa10.27□□□□□ -0.77
RIF1-210ENST00000484077 UBTFP17480 764 aaKnown RBP10.27□□□□□ -0.77
RIF1-210ENST00000484077 ADD1P35611 737 aaKnown RBP10.27□□□□□ -0.77
RIF1-210ENST00000484077 PTGIRP43119 386 aa10.27□□□□□ -0.77
RIF1-210ENST00000484077 CYLDQ9NQC7 956 aa10.27□□□□□ -0.77
RIF1-210ENST00000484077 WFS1O76024 890 aa10.26□□□□□ -0.77
RIF1-210ENST00000484077 VAC14Q08AM6 782 aa10.26□□□□□ -0.77
RIF1-210ENST00000484077 NFX1Q12986 1120 aaKnown RBP10.26□□□□□ -0.77
RIF1-210ENST00000484077 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.26□□□□□ -0.77
RIF1-210ENST00000484077 SLC16A10Q8TF71 515 aa10.26□□□□□ -0.77
RIF1-210ENST00000484077 PCDHB11Q9Y5F2 797 aa10.26□□□□□ -0.77
RIF1-210ENST00000484077 EEA1Q15075 1411 aa10.25□□□□□ -0.77
RIF1-210ENST00000484077 RELBQ01201 579 aa10.25□□□□□ -0.77
RIF1-210ENST00000484077 SLFNL1Q499Z3 407 aa10.25□□□□□ -0.77
RIF1-210ENST00000484077 LCE2AQ5TA79 106 aaPredicted RBP10.25□□□□□ -0.77
RIF1-210ENST00000484077 PRXQ9BXM0 1461 aa10.24□□□□□ -0.77
RIF1-210ENST00000484077 ATP5J2-PTCD1G3V325 749 aa10.24□□□□□ -0.77
RIF1-210ENST00000484077 SEMA3FQ13275 785 aa10.24□□□□□ -0.77
RIF1-210ENST00000484077 CYP2U1Q7Z449 544 aa10.24□□□□□ -0.77
RIF1-210ENST00000484077 PHTF2Q8N3S3 785 aa10.24□□□□□ -0.77
RIF1-210ENST00000484077 AGBL1Q96MI9 1066 aa10.24□□□□□ -0.77
RIF1-210ENST00000484077 ESF1Q9H501 851 aaKnown RBP10.24□□□□□ -0.77
RIF1-210ENST00000484077 CHIC2Q9UKJ5 165 aa10.24□□□□□ -0.77
RIF1-210ENST00000484077 PRG4Q92954 1404 aaPredicted RBP10.24□□□□□ -0.77
RIF1-210ENST00000484077 KIAA0556O60303 1618 aa10.23□□□□□ -0.77
RIF1-210ENST00000484077 KIF21BO75037 1637 aa10.23□□□□□ -0.77
RIF1-210ENST00000484077 KDF1Q8NAX2 398 aaPredicted RBP10.23□□□□□ -0.77
RIF1-210ENST00000484077 DNMT3LQ9UJW3 386 aa10.23□□□□□ -0.77
RIF1-210ENST00000484077 TRAK2O60296 914 aa10.22□□□□□ -0.77
RIF1-210ENST00000484077 MYCP01106 439 aaPredicted RBP10.22□□□□□ -0.77
RIF1-210ENST00000484077 RNF135Q8IUD6 432 aa10.22□□□□□ -0.77
RIF1-210ENST00000484077 SIRT1Q96EB6 747 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms