RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 TMX4Q9H1E5 349 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-207ENST00000483888 NAP1L3Q99457 506 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-207ENST00000483888 CCDC7Q96M83 1385 aa11.97□□□□□ -0.49
COL12A1-207ENST00000483888 NBPF8Q3BBV2 869 aa11.96□□□□□ -0.49
COL12A1-207ENST00000483888 MAATS1Q7Z4T9 603 aa11.96□□□□□ -0.49
COL12A1-207ENST00000483888 RALYLQ86SE5 291 aaKnown RBP11.96□□□□□ -0.49
COL12A1-207ENST00000483888 C6orf163Q5TEZ5 329 aa11.96□□□□□ -0.49
COL12A1-207ENST00000483888 ZSWIM4Q9H7M6 989 aa11.96□□□□□ -0.49
COL12A1-207ENST00000483888 KIF27Q86VH2 1401 aa11.96□□□□□ -0.49
COL12A1-207ENST00000483888 KIF3CO14782 793 aa11.96□□□□□ -0.49
COL12A1-207ENST00000483888 ATP6V1AP38606 617 aa11.96□□□□□ -0.49
COL12A1-207ENST00000483888 STIM1Q13586 685 aa11.96□□□□□ -0.49
COL12A1-207ENST00000483888 UVSSAQ2YD98 709 aa11.96□□□□□ -0.49
COL12A1-207ENST00000483888 CEP112Q8N8E3 955 aa11.96□□□□□ -0.49
COL12A1-207ENST00000483888 BRD4O60885 1362 aaPredicted RBP11.96□□□□□ -0.49
COL12A1-207ENST00000483888 ZFYP08048 801 aaPredicted RBP11.96□□□□□ -0.49
COL12A1-207ENST00000483888 TCEAL9Q9UHQ7 104 aa11.96□□□□□ -0.49
COL12A1-207ENST00000483888 SPECC1Q5M775 1068 aa11.96□□□□□ -0.5
COL12A1-207ENST00000483888 XBP1P17861 261 aa11.95□□□□□ -0.5
COL12A1-207ENST00000483888 GCKP35557 465 aa11.95□□□□□ -0.5
COL12A1-207ENST00000483888 LRSAM1Q6UWE0 723 aa11.95□□□□□ -0.5
COL12A1-207ENST00000483888 FBF1Q8TES7 1133 aa11.95□□□□□ -0.5
COL12A1-207ENST00000483888 CCDC83Q8IWF9 413 aa11.95□□□□□ -0.5
COL12A1-207ENST00000483888 ATRIPQ8WXE1 791 aa11.95□□□□□ -0.5
COL12A1-207ENST00000483888 C9orf78Q9NZ63 289 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-207ENST00000483888 STAMBPO95630 424 aa11.95□□□□□ -0.5
COL12A1-207ENST00000483888 KANK1Q14678 1352 aa11.95□□□□□ -0.5
COL12A1-207ENST00000483888 STK3Q13188 491 aa11.95□□□□□ -0.5
COL12A1-207ENST00000483888 SLU7O95391 586 aaKnown RBP11.94□□□□□ -0.5
COL12A1-207ENST00000483888 ANO10Q9NW15 660 aa11.94□□□□□ -0.5
COL12A1-207ENST00000483888 SSBP05455 408 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL12A1-207ENST00000483888 STK26Q9P289 416 aa11.94□□□□□ -0.5
COL12A1-207ENST00000483888 BUB1BO60566 1050 aaPredicted RBP11.94□□□□□ -0.5
COL12A1-207ENST00000483888 KLHL40Q2TBA0 621 aa11.94□□□□□ -0.5
COL12A1-207ENST00000483888 WASHC2CQ9Y4E1 1318 aa11.94□□□□□ -0.5
COL12A1-207ENST00000483888 PDE3AQ14432 1141 aa11.94□□□□□ -0.5
COL12A1-207ENST00000483888 ANKRD1Q15327 319 aa11.94□□□□□ -0.5
COL12A1-207ENST00000483888 CYP46A1Q9Y6A2 500 aa11.94□□□□□ -0.5
COL12A1-207ENST00000483888 SEPT14Q6ZU15 432 aa11.94□□□□□ -0.5
COL12A1-207ENST00000483888 HLTFQ14527 1009 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL12A1-207ENST00000483888 TMC6Q7Z403 805 aa11.93□□□□□ -0.5
COL12A1-207ENST00000483888 GCC1Q96CN9 775 aa11.93□□□□□ -0.5
COL12A1-207ENST00000483888 RUNDC1Q96C34 613 aa11.93□□□□□ -0.5
COL12A1-207ENST00000483888 SPA17Q15506 151 aa11.93□□□□□ -0.5
COL12A1-207ENST00000483888 DHX16O60231 1041 aaKnown RBP11.92□□□□□ -0.5
COL12A1-207ENST00000483888 CCDC178Q5BJE1 867 aa11.92□□□□□ -0.5
COL12A1-207ENST00000483888 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
COL12A1-207ENST00000483888 RBBP5Q15291 538 aaKnown RBP11.92□□□□□ -0.5
COL12A1-207ENST00000483888 CCDC12Q8WUD4 166 aaPredicted RBP11.92□□□□□ -0.5
COL12A1-207ENST00000483888 ATP2B1P20020 1258 aa11.92□□□□□ -0.5
COL12A1-207ENST00000483888 PAFAH1B1P43034 410 aa11.92□□□□□ -0.5
COL12A1-207ENST00000483888 NSRP1Q9H0G5 558 aaKnown RBP11.92□□□□□ -0.5
COL12A1-207ENST00000483888 DDX46Q7L014 1031 aaKnown RBP11.92□□□□□ -0.5
COL12A1-207ENST00000483888 POTEDQ86YR6 584 aa11.92□□□□□ -0.5
COL12A1-207ENST00000483888 CCDC50Q8IVM0 306 aa11.92□□□□□ -0.5
COL12A1-207ENST00000483888 CNPY4Q8N129 248 aa11.92□□□□□ -0.5
COL12A1-207ENST00000483888 TANGO6Q9C0B7 1094 aa11.92□□□□□ -0.5
COL12A1-207ENST00000483888 ZBTB9Q96C00 473 aa11.92□□□□□ -0.5
COL12A1-207ENST00000483888 BAG4O95429 457 aaKnown RBP11.92□□□□□ -0.5
COL12A1-207ENST00000483888 FEZ2Q9UHY8 353 aaPredicted RBP11.92□□□□□ -0.5
COL12A1-207ENST00000483888 GNG11P61952 73 aa11.92□□□□□ -0.5
COL12A1-207ENST00000483888 TTC12Q9H892 705 aaPredicted RBP11.92□□□□□ -0.5
COL12A1-207ENST00000483888 SERPINA10Q9UK55 444 aa11.92□□□□□ -0.5
COL12A1-207ENST00000483888 B4GALNT4Q76KP1 1039 aa11.92□□□□□ -0.5
COL12A1-207ENST00000483888 EIF5P55010 431 aaKnown RBP11.91□□□□□ -0.5
COL12A1-207ENST00000483888 MYRIPQ8NFW9 859 aa11.91□□□□□ -0.5
COL12A1-207ENST00000483888 SOGA1O94964 1423 aa11.91□□□□□ -0.5
COL12A1-207ENST00000483888 TERF2IPQ9NYB0 399 aa11.91□□□□□ -0.5
COL12A1-207ENST00000483888 G3BP1Q13283 466 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL12A1-207ENST00000483888 CKAP2LQ8IYA6 745 aa11.91□□□□□ -0.5
COL12A1-207ENST00000483888 CCDC150Q8NCX0 1101 aa11.91□□□□□ -0.5
COL12A1-207ENST00000483888 NAA15Q9BXJ9 866 aaKnown RBP11.91□□□□□ -0.5
COL12A1-207ENST00000483888 GOLGA1Q92805 767 aa11.91□□□□□ -0.5
COL12A1-207ENST00000483888 OPA1O60313 960 aa11.91□□□□□ -0.5
COL12A1-207ENST00000483888 INPP5BP32019 993 aa11.9□□□□□ -0.5
COL12A1-207ENST00000483888 DNAJC21Q5F1R6 531 aaKnown RBP11.9□□□□□ -0.5
COL12A1-207ENST00000483888 ZEB2O60315 1214 aa11.9□□□□□ -0.5
COL12A1-207ENST00000483888 TERF1P54274 439 aa11.9□□□□□ -0.5
COL12A1-207ENST00000483888 RIPK4P57078 832 aa11.9□□□□□ -0.5
COL12A1-207ENST00000483888 CHD1LQ86WJ1 897 aa11.9□□□□□ -0.5
COL12A1-207ENST00000483888 ABCC9O60706 1549 aa11.9□□□□□ -0.5
COL12A1-207ENST00000483888 PSMD1Q99460 953 aa11.9□□□□□ -0.5
COL12A1-207ENST00000483888 C1orf115Q9H7X2 142 aa11.9□□□□□ -0.5
COL12A1-207ENST00000483888 LMNTD2Q8IXW0 634 aa11.9□□□□□ -0.5
COL12A1-207ENST00000483888 CCDC18Q5T9S5 1454 aa11.9□□□□□ -0.5
COL12A1-207ENST00000483888 PCK1P35558 622 aa11.9□□□□□ -0.5
COL12A1-207ENST00000483888 FAM184BQ9ULE4 1060 aa11.9□□□□□ -0.51
COL12A1-207ENST00000483888 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-207ENST00000483888 CASTP20810 708 aaKnown RBP11.89□□□□□ -0.51
COL12A1-207ENST00000483888 CEP128Q6ZU80 1094 aa11.89□□□□□ -0.51
COL12A1-207ENST00000483888 CCDC43Q96MW1 224 aaKnown RBP11.89□□□□□ -0.51
COL12A1-207ENST00000483888 NUP155O75694 1391 aa11.89□□□□□ -0.51
COL12A1-207ENST00000483888 PHACTR2O75167 634 aa11.89□□□□□ -0.51
COL12A1-207ENST00000483888 CDK5RAP3Q96JB5 506 aa11.89□□□□□ -0.51
COL12A1-207ENST00000483888 BCAR3O75815 825 aa11.89□□□□□ -0.51
COL12A1-207ENST00000483888 PEX19P40855 299 aa11.89□□□□□ -0.51
COL12A1-207ENST00000483888 HSP90AB4PQ58FF6 505 aa11.89□□□□□ -0.51
COL12A1-207ENST00000483888 ATP11AP98196 1134 aa11.89□□□□□ -0.51
COL12A1-207ENST00000483888 SKAP1Q86WV1 359 aa11.89□□□□□ -0.51
COL12A1-207ENST00000483888 UTP14CQ5TAP6 766 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms