RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 CNTNAP3BQ96NU0 1288 aa6.9□□□□□ -1.3
LRCH3-217ENST00000483442 CNTNAP3Q9BZ76 1288 aa6.9□□□□□ -1.3
LRCH3-217ENST00000483442 GSK3AP49840 483 aa6.89□□□□□ -1.31
LRCH3-217ENST00000483442 NANOS1Q8WY41 292 aaKnown RBP6.89□□□□□ -1.31
LRCH3-217ENST00000483442 POLMQ9NP87 494 aaPredicted RBP6.89□□□□□ -1.31
LRCH3-217ENST00000483442 CEP164Q9UPV0 1460 aa6.88□□□□□ -1.31
LRCH3-217ENST00000483442 ADH1AP07327 375 aa6.88□□□□□ -1.31
LRCH3-217ENST00000483442 NBPF20Q3BBV1 942 aa6.88□□□□□ -1.31
LRCH3-217ENST00000483442 VWA5B2Q8N398 1253 aa6.88□□□□□ -1.31
LRCH3-217ENST00000483442 COL25A1Q9BXS0 654 aaPredicted RBP6.88□□□□□ -1.31
LRCH3-217ENST00000483442 GOPCQ9HD26 462 aa6.88□□□□□ -1.31
LRCH3-217ENST00000483442 MROH2BQ7Z745 1585 aa6.87□□□□□ -1.31
LRCH3-217ENST00000483442 ARHGEF11O15085 1522 aa6.87□□□□□ -1.31
LRCH3-217ENST00000483442 GPR37L1O60883 481 aa6.87□□□□□ -1.31
LRCH3-217ENST00000483442 GIGYF1O75420 1035 aaPredicted RBP6.87□□□□□ -1.31
LRCH3-217ENST00000483442 FBXO45P0C2W1 286 aa6.87□□□□□ -1.31
LRCH3-217ENST00000483442 ITGA6P23229 1130 aa6.87□□□□□ -1.31
LRCH3-217ENST00000483442 PTGIRP43119 386 aa6.87□□□□□ -1.31
LRCH3-217ENST00000483442 NEUROD2Q15784 382 aa6.87□□□□□ -1.31
LRCH3-217ENST00000483442 PCMTD1Q96MG8 357 aaPredicted RBP6.87□□□□□ -1.31
LRCH3-217ENST00000483442 CYLDQ9NQC7 956 aa6.87□□□□□ -1.31
LRCH3-217ENST00000483442 CUEDC1Q9NWM3 386 aaPredicted RBP6.87□□□□□ -1.31
LRCH3-217ENST00000483442 FANCD2Q9BXW9 1451 aa6.86□□□□□ -1.31
LRCH3-217ENST00000483442 WHAMMQ8TF30 809 aa6.86□□□□□ -1.31
LRCH3-217ENST00000483442 PEG3Q9GZU2 1588 aa6.86□□□□□ -1.31
LRCH3-217ENST00000483442 BRPF1P55201 1214 aaPredicted RBP6.85□□□□□ -1.31
LRCH3-217ENST00000483442 TMEM259Q4ZIN3 620 aa6.85□□□□□ -1.31
LRCH3-217ENST00000483442 CDC14CA4D256 554 aa6.84□□□□□ -1.31
LRCH3-217ENST00000483442 ZBBXA8MT70 800 aa6.84□□□□□ -1.31
LRCH3-217ENST00000483442 ZNF385CQ66K41 422 aaPredicted RBP6.84□□□□□ -1.31
LRCH3-217ENST00000483442 PCDHB9Q9Y5E1 797 aa6.84□□□□□ -1.31
LRCH3-217ENST00000483442 RHOQP17081 205 aa6.83□□□□□ -1.32
LRCH3-217ENST00000483442 PNMA1Q8ND90 353 aa6.83□□□□□ -1.32
LRCH3-217ENST00000483442 SCTRP47872 440 aa6.82□□□□□ -1.32
LRCH3-217ENST00000483442 PRICKLE2Q7Z3G6 844 aa6.82□□□□□ -1.32
LRCH3-217ENST00000483442 ADAMTS8Q9UP79 889 aa6.82□□□□□ -1.32
LRCH3-217ENST00000483442 URB2Q14146 1524 aaKnown RBP6.81□□□□□ -1.32
LRCH3-217ENST00000483442 KCNMA1Q12791 1236 aa6.81□□□□□ -1.32
LRCH3-217ENST00000483442 GAS6Q14393 721 aa6.81□□□□□ -1.32
LRCH3-217ENST00000483442 SV2AQ7L0J3 742 aa6.81□□□□□ -1.32
LRCH3-217ENST00000483442 LYSMD3Q7Z3D4 306 aa6.81□□□□□ -1.32
LRCH3-217ENST00000483442 SEPT12Q8IYM1 358 aa6.81□□□□□ -1.32
LRCH3-217ENST00000483442 MTMR14Q8NCE2 650 aa6.81□□□□□ -1.32
LRCH3-217ENST00000483442 SNRKQ9NRH2 765 aa6.81□□□□□ -1.32
LRCH3-217ENST00000483442 ZNF608Q9ULD9 1512 aaPredicted RBP6.81□□□□□ -1.32
LRCH3-217ENST00000483442 SLURP2P0DP57 97 aa6.8□□□□□ -1.32
LRCH3-217ENST00000483442 RNF144AP50876 292 aaPredicted RBP6.8□□□□□ -1.32
LRCH3-217ENST00000483442 ARAP1Q96P48 1450 aa6.79□□□□□ -1.32
LRCH3-217ENST00000483442 A0A1W2PRU2 124 aa6.79□□□□□ -1.32
LRCH3-217ENST00000483442 ATP5J2-PTCD1G3V325 749 aa6.79□□□□□ -1.32
LRCH3-217ENST00000483442 ARHGEF15O94989 841 aa6.79□□□□□ -1.32
LRCH3-217ENST00000483442 ERVK-9P63128 1117 aa6.79□□□□□ -1.32
LRCH3-217ENST00000483442 CFTRP13569 1480 aa6.79□□□□□ -1.32
LRCH3-217ENST00000483442 MEN1O00255 615 aa6.78□□□□□ -1.32
LRCH3-217ENST00000483442 NR1H3Q13133 447 aa6.78□□□□□ -1.32
LRCH3-217ENST00000483442 KCTD17Q8N5Z5 321 aa6.78□□□□□ -1.32
LRCH3-217ENST00000483442 GPR25O00155 361 aa6.77□□□□□ -1.33
LRCH3-217ENST00000483442 DBN1Q16643 649 aa6.77□□□□□ -1.33
LRCH3-217ENST00000483442 CC2D2BQ6DHV5 1058 aa6.77□□□□□ -1.33
LRCH3-217ENST00000483442 LYPD4Q6UWN0 246 aa6.77□□□□□ -1.33
LRCH3-217ENST00000483442 SVOPQ8N4V2 548 aa6.77□□□□□ -1.33
LRCH3-217ENST00000483442 OSBPL3Q9H4L5 887 aa6.77□□□□□ -1.33
LRCH3-217ENST00000483442 ADAMTS2O95450 1211 aa6.76□□□□□ -1.33
LRCH3-217ENST00000483442 RASSF7Q02833 373 aa6.76□□□□□ -1.33
LRCH3-217ENST00000483442 POU4F2Q12837 409 aa6.76□□□□□ -1.33
LRCH3-217ENST00000483442 ZNF837Q96EG3 531 aaPredicted RBP6.76□□□□□ -1.33
LRCH3-217ENST00000483442 CDCA7Q9BWT1 371 aaPredicted RBP6.76□□□□□ -1.33
LRCH3-217ENST00000483442 AQRO60306 1485 aaKnown RBP eCLIP6.76□□□□□ -1.332e-6■■■□□ 18.4
LRCH3-217ENST00000483442 IFT140Q96RY7 1462 aa6.76□□□□□ -1.33
LRCH3-217ENST00000483442 TRAK2O60296 914 aa6.75□□□□□ -1.33
LRCH3-217ENST00000483442 TSGA10IPQ3SY00 556 aa6.75□□□□□ -1.33
LRCH3-217ENST00000483442 BANK1Q8NDB2 785 aa6.75□□□□□ -1.33
LRCH3-217ENST00000483442 GRIP2Q9C0E4 1043 aa6.75□□□□□ -1.33
LRCH3-217ENST00000483442 PCDHB11Q9Y5F2 797 aa6.75□□□□□ -1.33
LRCH3-217ENST00000483442 WIZO95785 1651 aa6.74□□□□□ -1.33
LRCH3-217ENST00000483442 CCDC85AQ96PX6 553 aaPredicted RBP6.74□□□□□ -1.33
LRCH3-217ENST00000483442 ARHGEF10LQ9HCE6 1279 aa6.74□□□□□ -1.33
LRCH3-217ENST00000483442 RAB6BQ9NRW1 208 aa6.74□□□□□ -1.33
LRCH3-217ENST00000483442 THBS1P07996 1170 aa6.73□□□□□ -1.33
LRCH3-217ENST00000483442 GPC1P35052 558 aa6.73□□□□□ -1.33
LRCH3-217ENST00000483442 TRIM22Q8IYM9 498 aa6.73□□□□□ -1.33
LRCH3-217ENST00000483442 CHMP7Q8WUX9 453 aaPredicted RBP6.73□□□□□ -1.33
LRCH3-217ENST00000483442 NDUFB9Q9Y6M9 179 aa6.73□□□□□ -1.33
LRCH3-217ENST00000483442 GDF11O95390 407 aa6.72□□□□□ -1.33
LRCH3-217ENST00000483442 STAU1O95793 577 aaKnown RBP6.72□□□□□ -1.33
LRCH3-217ENST00000483442 CELA2BP08218 269 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-217ENST00000483442 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
LRCH3-217ENST00000483442 CLN3Q13286 438 aa6.72□□□□□ -1.33
LRCH3-217ENST00000483442 NBPF10Q6P3W6 841 aaKnown RBP6.72□□□□□ -1.33
LRCH3-217ENST00000483442 RIPOR1Q6ZS17 1223 aa6.72□□□□□ -1.33
LRCH3-217ENST00000483442 TMEM151AQ8N4L1 468 aa6.72□□□□□ -1.33
LRCH3-217ENST00000483442 NBPF15Q8N660 670 aa6.72□□□□□ -1.33
LRCH3-217ENST00000483442 GAS2L1Q99501 681 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-217ENST00000483442 CEP126Q9P2H0 1117 aa6.72□□□□□ -1.33
LRCH3-217ENST00000483442 TBC1D2BQ9UPU7 963 aa6.72□□□□□ -1.33
LRCH3-217ENST00000483442 RSF1Q96T23 1441 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-217ENST00000483442 SOCS7O14512 581 aa6.71□□□□□ -1.34
LRCH3-217ENST00000483442 IL2RAP01589 272 aa6.71□□□□□ -1.34
LRCH3-217ENST00000483442 SLC27A3Q5K4L6 730 aa6.71□□□□□ -1.34
LRCH3-217ENST00000483442 RNF20Q5VTR2 975 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms