RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 USP35Q9P2H5 1018 aa6.16□□□□□ -1.42
LTN1-205ENST00000483326 ZNF330Q9Y3S2 320 aaPredicted RBP6.16□□□□□ -1.42
LTN1-205ENST00000483326 SOS2Q07890 1332 aaPredicted RBP6.16□□□□□ -1.42
LTN1-205ENST00000483326 BRD1O95696 1058 aa6.16□□□□□ -1.42
LTN1-205ENST00000483326 INTS6LQ5JSJ4 861 aaKnown RBP6.16□□□□□ -1.42
LTN1-205ENST00000483326 LCE2CQ5TA81 110 aa6.16□□□□□ -1.42
LTN1-205ENST00000483326 CCDC180Q9P1Z9 1646 aa6.15□□□□□ -1.42
LTN1-205ENST00000483326 SOBPA7XYQ1 873 aa6.15□□□□□ -1.43
LTN1-205ENST00000483326 VEGFBP49765 207 aa6.15□□□□□ -1.43
LTN1-205ENST00000483326 TRIM34Q9BYJ4 488 aa6.15□□□□□ -1.43
LTN1-205ENST00000483326 COG6Q9Y2V7 657 aa6.15□□□□□ -1.43
LTN1-205ENST00000483326 GMPRP36959 345 aa6.14□□□□□ -1.43
LTN1-205ENST00000483326 ZEB1P37275 1124 aaPredicted RBP6.14□□□□□ -1.43
LTN1-205ENST00000483326 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.14□□□□□ -1.43
LTN1-205ENST00000483326 FAM9AQ8IZU1 332 aaPredicted RBP6.14□□□□□ -1.43
LTN1-205ENST00000483326 BANK1Q8NDB2 785 aa6.14□□□□□ -1.43
LTN1-205ENST00000483326 TTLL8A6PVC2 850 aa6.13□□□□□ -1.43
LTN1-205ENST00000483326 CBLBQ13191 982 aa6.13□□□□□ -1.43
LTN1-205ENST00000483326 CCDC27Q2M243 656 aa6.13□□□□□ -1.43
LTN1-205ENST00000483326 FAM181BA6NEQ2 426 aa6.13□□□□□ -1.43
LTN1-205ENST00000483326 ZBBXA8MT70 800 aa6.13□□□□□ -1.43
LTN1-205ENST00000483326 SPINT1O43278 529 aa6.13□□□□□ -1.43
LTN1-205ENST00000483326 CCDC125Q86Z20 511 aa6.13□□□□□ -1.43
LTN1-205ENST00000483326 SEPT12Q8IYM1 358 aa6.13□□□□□ -1.43
LTN1-205ENST00000483326 ZNF592Q92610 1267 aa6.13□□□□□ -1.43
LTN1-205ENST00000483326 ESPNB1AK53 854 aa6.12□□□□□ -1.43
LTN1-205ENST00000483326 SOCS7O14512 581 aa6.12□□□□□ -1.43
LTN1-205ENST00000483326 VSIG8P0DPA2 414 aa6.12□□□□□ -1.43
LTN1-205ENST00000483326 MCCD1P59942 119 aaPredicted RBP6.12□□□□□ -1.43
LTN1-205ENST00000483326 DNMT3LQ9UJW3 386 aa6.12□□□□□ -1.43
LTN1-205ENST00000483326 USTQ9Y2C2 406 aa6.12□□□□□ -1.43
LTN1-205ENST00000483326 ERBB4Q15303 1308 aa6.12□□□□□ -1.43
LTN1-205ENST00000483326 PPFIA3O75145 1194 aa6.11□□□□□ -1.43
LTN1-205ENST00000483326 GJD4Q96KN9 370 aaPredicted RBP6.11□□□□□ -1.43
LTN1-205ENST00000483326 ERVH48-1M5A8F1 160 aa6.11□□□□□ -1.43
LTN1-205ENST00000483326 RAB15P59190 212 aa6.11□□□□□ -1.43
LTN1-205ENST00000483326 WWC1Q8IX03 1113 aa6.11□□□□□ -1.43
LTN1-205ENST00000483326 RELBQ01201 579 aa6.1□□□□□ -1.43
LTN1-205ENST00000483326 ZSCAN1Q8NBB4 408 aa6.1□□□□□ -1.43
LTN1-205ENST00000483326 ZNF784Q8NCA9 323 aaPredicted RBP6.1□□□□□ -1.43
LTN1-205ENST00000483326 PCDHB9Q9Y5E1 797 aa6.1□□□□□ -1.43
LTN1-205ENST00000483326 FIGNL2A6NMB9 653 aa6.09□□□□□ -1.43
LTN1-205ENST00000483326 ADH1AP07327 375 aa6.09□□□□□ -1.43
LTN1-205ENST00000483326 RNF20Q5VTR2 975 aa6.09□□□□□ -1.43
LTN1-205ENST00000483326 CALR3Q96L12 384 aaKnown RBP6.09□□□□□ -1.43
LTN1-205ENST00000483326 AGBL1Q96MI9 1066 aa6.09□□□□□ -1.43
LTN1-205ENST00000483326 SNRKQ9NRH2 765 aa6.09□□□□□ -1.43
LTN1-205ENST00000483326 TMPRSS4Q9NRS4 437 aa6.09□□□□□ -1.43
LTN1-205ENST00000483326 FBXO45P0C2W1 286 aa6.08□□□□□ -1.44
LTN1-205ENST00000483326 NR1H3Q13133 447 aa6.08□□□□□ -1.44
LTN1-205ENST00000483326 LILRA1O75019 489 aa6.08□□□□□ -1.44
LTN1-205ENST00000483326 PTGIRP43119 386 aa6.08□□□□□ -1.44
LTN1-205ENST00000483326 PTSQ03393 145 aa6.08□□□□□ -1.44
LTN1-205ENST00000483326 SND1Q7KZF4 910 aaKnown RBP eCLIP6.08□□□□□ -1.44
LTN1-205ENST00000483326 PPARGC1BQ86YN6 1023 aaKnown RBP6.08□□□□□ -1.44
LTN1-205ENST00000483326 PBXIP1Q96AQ6 731 aa6.08□□□□□ -1.44
LTN1-205ENST00000483326 POLMQ9NP87 494 aaPredicted RBP6.08□□□□□ -1.44
LTN1-205ENST00000483326 NDUFB9Q9Y6M9 179 aa6.08□□□□□ -1.44
LTN1-205ENST00000483326 GIGYF1O75420 1035 aaPredicted RBP6.07□□□□□ -1.44
LTN1-205ENST00000483326 INSM2Q96T92 566 aaPredicted RBP6.07□□□□□ -1.44
LTN1-205ENST00000483326 ANP32EQ9BTT0 268 aa6.07□□□□□ -1.44
LTN1-205ENST00000483326 ZNF395Q9H8N7 513 aaPredicted RBP6.07□□□□□ -1.44
LTN1-205ENST00000483326 CSB-PGBD3P0DP91 1061 aa6.06□□□□□ -1.44
LTN1-205ENST00000483326 ADD1P35611 737 aaKnown RBP6.06□□□□□ -1.44
LTN1-205ENST00000483326 CTSOP43234 321 aaPredicted RBP6.06□□□□□ -1.44
LTN1-205ENST00000483326 PRM3Q9NNZ6 103 aa6.06□□□□□ -1.44
LTN1-205ENST00000483326 FAM177A1Q8N128 213 aaPredicted RBP6.06□□□□□ -1.44
LTN1-205ENST00000483326 CCDC155Q8N6L0 562 aa6.06□□□□□ -1.44
LTN1-205ENST00000483326 MTMR14Q8NCE2 650 aa6.06□□□□□ -1.44
LTN1-205ENST00000483326 CYLDQ9NQC7 956 aa6.06□□□□□ -1.44
LTN1-205ENST00000483326 SLC35F4A4IF30 521 aa6.05□□□□□ -1.44
LTN1-205ENST00000483326 RNF217Q8TC41 542 aa6.05□□□□□ -1.44
LTN1-205ENST00000483326 NANOS1Q8WY41 292 aaKnown RBP6.05□□□□□ -1.44
LTN1-205ENST00000483326 GLMNQ92990 594 aa6.05□□□□□ -1.44
LTN1-205ENST00000483326 LORP23490 312 aaPredicted RBP6.04□□□□□ -1.44
LTN1-205ENST00000483326 CHMP4AQ9BY43 222 aa6.04□□□□□ -1.44
LTN1-205ENST00000483326 ESF1Q9H501 851 aaKnown RBP6.04□□□□□ -1.44
LTN1-205ENST00000483326 IVNS1ABPQ9Y6Y0 642 aa6.04□□□□□ -1.44
LTN1-205ENST00000483326 ABCC9O60706 1549 aa6.04□□□□□ -1.44
LTN1-205ENST00000483326 ATP5J2-PTCD1G3V325 749 aa6.03□□□□□ -1.44
LTN1-205ENST00000483326 CC2D2BQ6DHV5 1058 aa6.03□□□□□ -1.44
LTN1-205ENST00000483326 IGSF5Q9NSI5 407 aa6.03□□□□□ -1.44
LTN1-205ENST00000483326 RNF144AP50876 292 aaPredicted RBP6.03□□□□□ -1.44
LTN1-205ENST00000483326 LYSMD3Q7Z3D4 306 aa6.03□□□□□ -1.44
LTN1-205ENST00000483326 KDF1Q8NAX2 398 aaPredicted RBP6.03□□□□□ -1.44
LTN1-205ENST00000483326 PCGF6Q9BYE7 350 aa6.03□□□□□ -1.44
LTN1-205ENST00000483326 ITGA6P23229 1130 aa6.02□□□□□ -1.45
LTN1-205ENST00000483326 GPC1P35052 558 aa6.02□□□□□ -1.45
LTN1-205ENST00000483326 ERVK-9P63128 1117 aa6.02□□□□□ -1.45
LTN1-205ENST00000483326 SV2AQ7L0J3 742 aa6.02□□□□□ -1.45
LTN1-205ENST00000483326 CYP2U1Q7Z449 544 aa6.02□□□□□ -1.45
LTN1-205ENST00000483326 GDPD2Q9HCC8 539 aa6.02□□□□□ -1.45
LTN1-205ENST00000483326 TBC1D2BQ9UPU7 963 aa6.02□□□□□ -1.45
LTN1-205ENST00000483326 RBM47A0AV96 593 aaKnown RBP6.01□□□□□ -1.45
LTN1-205ENST00000483326 UNCXA6NJT0 531 aa6.01□□□□□ -1.45
LTN1-205ENST00000483326 CANXP27824 592 aaKnown RBP6.01□□□□□ -1.45
LTN1-205ENST00000483326 ABL2P42684 1182 aa6.01□□□□□ -1.45
LTN1-205ENST00000483326 GPR37L1O60883 481 aa6.01□□□□□ -1.45
LTN1-205ENST00000483326 VWA5B2Q8N398 1253 aa6.01□□□□□ -1.45
LTN1-205ENST00000483326 GPR161Q8N6U8 529 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms