RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.19□□□□□ -0.78
RBM39-233ENST00000482563 MAP4K4O95819 1239 aaPredicted RBP10.19□□□□□ -0.78
RBM39-233ENST00000482563 LDHBP07195 334 aaKnown RBP10.19□□□□□ -0.78
RBM39-233ENST00000482563 DAB2P98082 770 aa10.19□□□□□ -0.78
RBM39-233ENST00000482563 TRIM50Q86XT4 487 aa10.19□□□□□ -0.78
RBM39-233ENST00000482563 OSBPL2Q9H1P3 480 aa10.19□□□□□ -0.78
RBM39-233ENST00000482563 ATP1A2P50993 1020 aa10.18□□□□□ -0.78
RBM39-233ENST00000482563 FKBP5Q13451 457 aaPredicted RBP10.18□□□□□ -0.78
RBM39-233ENST00000482563 DESI1Q6ICB0 168 aa10.18□□□□□ -0.78
RBM39-233ENST00000482563 EXOC8Q8IYI6 725 aa10.18□□□□□ -0.78
RBM39-233ENST00000482563 MYH16Q9H6N6 1097 aa10.18□□□□□ -0.78
RBM39-233ENST00000482563 MRPL42Q9Y6G3 142 aaKnown RBP10.18□□□□□ -0.78
RBM39-233ENST00000482563 SORBS3O60504 671 aa10.17□□□□□ -0.78
RBM39-233ENST00000482563 PRPF40AO75400 957 aaKnown RBP10.17□□□□□ -0.78
RBM39-233ENST00000482563 MAP7D1Q3KQU3 841 aa10.17□□□□□ -0.78
RBM39-233ENST00000482563 CCDC181Q5TID7 509 aa10.17□□□□□ -0.78
RBM39-233ENST00000482563 SETDB2Q96T68 719 aa10.17□□□□□ -0.78
RBM39-233ENST00000482563 COLQQ9Y215 455 aaPredicted RBP10.17□□□□□ -0.78
RBM39-233ENST00000482563 NOP58Q9Y2X3 529 aaKnown RBP10.17□□□□□ -0.78
RBM39-233ENST00000482563 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
RBM39-233ENST00000482563 IGHA2P01877 340 aa10.16□□□□□ -0.78
RBM39-233ENST00000482563 NPR3P17342 541 aa10.16□□□□□ -0.78
RBM39-233ENST00000482563 BMS1Q14692 1282 aaKnown RBP10.16□□□□□ -0.78
RBM39-233ENST00000482563 RETREG3Q86VR2 466 aa10.16□□□□□ -0.78
RBM39-233ENST00000482563 BRINP2Q9C0B6 783 aa10.16□□□□□ -0.78
RBM39-233ENST00000482563 MRS2Q9HD23 443 aa10.16□□□□□ -0.78
RBM39-233ENST00000482563 WWC3Q9ULE0 1092 aa10.16□□□□□ -0.78
RBM39-233ENST00000482563 NOD1Q9Y239 953 aa10.16□□□□□ -0.78
RBM39-233ENST00000482563 ASTLQ6HA08 431 aaPredicted RBP10.16□□□□□ -0.78
RBM39-233ENST00000482563 GAS2L2Q8NHY3 880 aa10.16□□□□□ -0.78
RBM39-233ENST00000482563 EMILIN1Q9Y6C2 1016 aa10.16□□□□□ -0.78
RBM39-233ENST00000482563 CLSTN1O94985 981 aa10.15□□□□□ -0.78
RBM39-233ENST00000482563 F12P00748 615 aaPredicted RBP10.15□□□□□ -0.78
RBM39-233ENST00000482563 WEE1P30291 646 aa10.15□□□□□ -0.78
RBM39-233ENST00000482563 CCDC102BQ68D86 513 aa10.15□□□□□ -0.78
RBM39-233ENST00000482563 VTI1BQ9UEU0 232 aa10.15□□□□□ -0.78
RBM39-233ENST00000482563 ARID5AQ03989 594 aa10.14□□□□□ -0.79
RBM39-233ENST00000482563 GNL2Q13823 731 aaKnown RBP10.14□□□□□ -0.79
RBM39-233ENST00000482563 MCF2L2Q86YR7 1114 aa10.14□□□□□ -0.79
RBM39-233ENST00000482563 HSD3B2P26439 372 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 RACK1P63244 317 aaKnown RBP10.13□□□□□ -0.79
RBM39-233ENST00000482563 IRX6P78412 446 aaPredicted RBP10.13□□□□□ -0.79
RBM39-233ENST00000482563 TPCN2Q8NHX9 752 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 HELQQ8TDG4 1101 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 MAPK8P45983 427 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 ANAPC15P60006 121 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 GTF2IP78347 998 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 NAA30Q147X3 362 aaPredicted RBP10.13□□□□□ -0.79
RBM39-233ENST00000482563 TAF7LQ5H9L4 462 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 SWT1Q5T5J6 900 aaKnown RBP10.13□□□□□ -0.79
RBM39-233ENST00000482563 PACS2Q86VP3 889 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 KHSRPQ92945 711 aaKnown RBP eCLIP10.13□□□□□ -0.793e-14■■■□□ 14.6
RBM39-233ENST00000482563 CHPF2Q9P2E5 772 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 MAP10Q9P2G4 905 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 PCDHB9Q9Y5E1 797 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 COL4A3BPQ9Y5P4 624 aa10.13□□□□□ -0.79
RBM39-233ENST00000482563 EHHADHQ08426 723 aa10.12□□□□□ -0.79
RBM39-233ENST00000482563 ZNF394Q53GI3 561 aa10.12□□□□□ -0.79
RBM39-233ENST00000482563 RPUSD2Q8IZ73 545 aaKnown RBP10.12□□□□□ -0.79
RBM39-233ENST00000482563 CCDC85AQ96PX6 553 aaPredicted RBP10.12□□□□□ -0.79
RBM39-233ENST00000482563 DDX41Q9UJV9 622 aaKnown RBP10.12□□□□□ -0.79
RBM39-233ENST00000482563 FAN1Q9Y2M0 1017 aa10.12□□□□□ -0.79
RBM39-233ENST00000482563 PEX14O75381 377 aa10.11□□□□□ -0.79
RBM39-233ENST00000482563 NUDT7P0C024 238 aa10.11□□□□□ -0.79
RBM39-233ENST00000482563 IBSPP21815 317 aaPredicted RBP10.11□□□□□ -0.79
RBM39-233ENST00000482563 PSMD2Q13200 908 aa10.11□□□□□ -0.79
RBM39-233ENST00000482563 PDE3BQ13370 1112 aa10.11□□□□□ -0.79
RBM39-233ENST00000482563 GORABQ5T7V8 394 aa10.11□□□□□ -0.79
RBM39-233ENST00000482563 GRIPAP1Q4V328 841 aa10.1□□□□□ -0.79
RBM39-233ENST00000482563 PCDH12Q9NPG4 1184 aa10.1□□□□□ -0.79
RBM39-233ENST00000482563 BCCIPQ9P287 314 aaKnown RBP eCLIP10.1□□□□□ -0.79
RBM39-233ENST00000482563 INPP5FQ9Y2H2 1132 aa10.1□□□□□ -0.79
RBM39-233ENST00000482563 PCDHGB7Q9Y5F8 929 aa10.1□□□□□ -0.79
RBM39-233ENST00000482563 FGRP09769 529 aa10.1□□□□□ -0.79
RBM39-233ENST00000482563 MPSTP25325 297 aa10.1□□□□□ -0.79
RBM39-233ENST00000482563 SOGA3Q5TF21 947 aa10.1□□□□□ -0.79
RBM39-233ENST00000482563 PCDHGA11Q9Y5H2 935 aa10.1□□□□□ -0.79
RBM39-233ENST00000482563 ATP6V1AP38606 617 aa10.09□□□□□ -0.79
RBM39-233ENST00000482563 PLCB3Q01970 1234 aa10.09□□□□□ -0.79
RBM39-233ENST00000482563 HINFPQ9BQA5 517 aa10.09□□□□□ -0.79
RBM39-233ENST00000482563 BCL2L12Q9HB09 334 aa10.09□□□□□ -0.79
RBM39-233ENST00000482563 IFT57Q9NWB7 429 aa10.09□□□□□ -0.79
RBM39-233ENST00000482563 CCDC194A0A1B0GVG4 234 aa10.08□□□□□ -0.8
RBM39-233ENST00000482563 PTCD1O75127 700 aaKnown RBP10.08□□□□□ -0.8
RBM39-233ENST00000482563 FAM13AO94988 1023 aa10.08□□□□□ -0.8
RBM39-233ENST00000482563 PROX2Q3B8N5 592 aa10.08□□□□□ -0.8
RBM39-233ENST00000482563 PLEKHG6Q3KR16 790 aa10.08□□□□□ -0.8
RBM39-233ENST00000482563 GPR182O15218 404 aa10.07□□□□□ -0.8
RBM39-233ENST00000482563 NDUFB5O43674 189 aa10.07□□□□□ -0.8
RBM39-233ENST00000482563 TSEN2Q8NCE0 465 aaKnown RBP10.07□□□□□ -0.8
RBM39-233ENST00000482563 STAG1Q8WVM7 1258 aa10.07□□□□□ -0.8
RBM39-233ENST00000482563 PRKD2Q9BZL6 878 aa10.07□□□□□ -0.8
RBM39-233ENST00000482563 CCDC87Q9NVE4 849 aa10.07□□□□□ -0.8
RBM39-233ENST00000482563 CTSHP09668 335 aa10.07□□□□□ -0.8
RBM39-233ENST00000482563 POTEIP0CG38 1075 aa10.07□□□□□ -0.8
RBM39-233ENST00000482563 ZCRB1Q8TBF4 217 aaKnown RBP10.07□□□□□ -0.8
RBM39-233ENST00000482563 RNF187Q5TA31 235 aaPredicted RBP10.06□□□□□ -0.8
RBM39-233ENST00000482563 C3orf67Q6ZVT6 689 aa10.06□□□□□ -0.8
RBM39-233ENST00000482563 FILIP1Q7Z7B0 1213 aa10.06□□□□□ -0.8
RBM39-233ENST00000482563 IRF2BPLQ9H1B7 796 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms