RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 IL2RBP14784 551 aa17.65■□□□□ 0.42
HDAC1-208ENST00000482310 RAPGEF4Q8WZA2 1011 aa17.65■□□□□ 0.42
HDAC1-208ENST00000482310 NCAPD2Q15021 1401 aa17.64■□□□□ 0.42
HDAC1-208ENST00000482310 DISP2A7MBM2 1401 aa17.64■□□□□ 0.41
HDAC1-208ENST00000482310 TATP17735 454 aaPredicted RBP17.63■□□□□ 0.41
HDAC1-208ENST00000482310 CCDC146Q8IYE0 955 aa17.63■□□□□ 0.41
HDAC1-208ENST00000482310 FAM9BQ8IZU0 186 aa17.63■□□□□ 0.41
HDAC1-208ENST00000482310 THRAP3Q9Y2W1 955 aaKnown RBP17.63■□□□□ 0.41
HDAC1-208ENST00000482310 SENP3-EIF4A1A0A087X0R7 540 aa17.62■□□□□ 0.41
HDAC1-208ENST00000482310 PRKAR2BP31323 418 aa17.62■□□□□ 0.41
HDAC1-208ENST00000482310 BARGINQ6ZT62 677 aa17.62■□□□□ 0.41
HDAC1-208ENST00000482310 OVOS2A0A0G2JMS6 1433 aa17.62■□□□□ 0.41
HDAC1-208ENST00000482310 SEPT12Q8IYM1 358 aa17.61■□□□□ 0.41
HDAC1-208ENST00000482310 RSPH6AQ9H0K4 717 aa17.61■□□□□ 0.41
HDAC1-208ENST00000482310 ADAMTS8Q9UP79 889 aa17.61■□□□□ 0.41
HDAC1-208ENST00000482310 KDRP35968 1356 aa17.61■□□□□ 0.41
HDAC1-208ENST00000482310 CCER2I3L3R5 266 aa17.6■□□□□ 0.41
HDAC1-208ENST00000482310 TNS2Q63HR2 1409 aa17.6■□□□□ 0.41
HDAC1-208ENST00000482310 DOT1LQ8TEK3 1739 aa17.59■□□□□ 0.41
HDAC1-208ENST00000482310 DDB1Q16531 1140 aa17.59■□□□□ 0.41
HDAC1-208ENST00000482310 FAM182BQ5T319 152 aa17.58■□□□□ 0.4
HDAC1-208ENST00000482310 PNISRQ8TF01 805 aaKnown RBP17.58■□□□□ 0.4
HDAC1-208ENST00000482310 SBF2Q86WG5 1849 aa17.58■□□□□ 0.4
HDAC1-208ENST00000482310 DDX54Q8TDD1 881 aaKnown RBP17.57■□□□□ 0.4
HDAC1-208ENST00000482310 CDCA7Q9BWT1 371 aaPredicted RBP17.57■□□□□ 0.4
HDAC1-208ENST00000482310 ITGB4P16144 1822 aa17.56■□□□□ 0.4
HDAC1-208ENST00000482310 MAPK8IP3Q9UPT6 1336 aa17.56■□□□□ 0.4
HDAC1-208ENST00000482310 EXOC5O00471 708 aa17.56■□□□□ 0.4
HDAC1-208ENST00000482310 FCHSD2O94868 740 aa17.56■□□□□ 0.4
HDAC1-208ENST00000482310 ZCRB1Q8TBF4 217 aaKnown RBP17.56■□□□□ 0.4
HDAC1-208ENST00000482310 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
HDAC1-208ENST00000482310 SCN11AQ9UI33 1791 aa17.56■□□□□ 0.4
HDAC1-208ENST00000482310 TOGARAM1Q9Y4F4 1720 aa17.55■□□□□ 0.4
HDAC1-208ENST00000482310 NEFMP07197 916 aa17.55■□□□□ 0.4
HDAC1-208ENST00000482310 PDE3BQ13370 1112 aa17.55■□□□□ 0.4
HDAC1-208ENST00000482310 PLEKHO1Q53GL0 409 aaPredicted RBP17.55■□□□□ 0.4
HDAC1-208ENST00000482310 ZNF530Q6P9A1 599 aaPredicted RBP17.55■□□□□ 0.4
HDAC1-208ENST00000482310 SPG7Q9UQ90 795 aa17.55■□□□□ 0.4
HDAC1-208ENST00000482310 PCDH11XQ9BZA7 1347 aa17.53■□□□□ 0.4
HDAC1-208ENST00000482310 PCDH11YQ9BZA8 1340 aa17.53■□□□□ 0.4
HDAC1-208ENST00000482310 ONECUT3O60422 494 aaPredicted RBP17.53■□□□□ 0.4
HDAC1-208ENST00000482310 MTHFSDQ2M296 383 aaKnown RBP17.53■□□□□ 0.4
HDAC1-208ENST00000482310 RRP7AQ9Y3A4 280 aaKnown RBP17.53■□□□□ 0.4
HDAC1-208ENST00000482310 NEUROD2Q15784 382 aa17.52■□□□□ 0.4
HDAC1-208ENST00000482310 KRT27Q7Z3Y8 459 aa17.52■□□□□ 0.4
HDAC1-208ENST00000482310 DEFB132Q7Z7B7 95 aa17.52■□□□□ 0.4
HDAC1-208ENST00000482310 PLEKHF1Q96S99 279 aa17.52■□□□□ 0.4
HDAC1-208ENST00000482310 C1orf141Q5JVX7 400 aa17.51■□□□□ 0.39
HDAC1-208ENST00000482310 MARCH10Q8NA82 808 aaPredicted RBP17.51■□□□□ 0.39
HDAC1-208ENST00000482310 RUNDC1Q96C34 613 aa17.51■□□□□ 0.39
HDAC1-208ENST00000482310 PNNQ9H307 717 aaKnown RBP17.51■□□□□ 0.39
HDAC1-208ENST00000482310 CYP27B1O15528 508 aa17.5■□□□□ 0.39
HDAC1-208ENST00000482310 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
HDAC1-208ENST00000482310 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
HDAC1-208ENST00000482310 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
HDAC1-208ENST00000482310 SALL2Q9Y467 1007 aaPredicted RBP17.49■□□□□ 0.39
HDAC1-208ENST00000482310 APAF1O14727 1248 aa17.48■□□□□ 0.39
HDAC1-208ENST00000482310 PHKG2P15735 406 aa17.48■□□□□ 0.39
HDAC1-208ENST00000482310 IFNL2Q8IZJ0 200 aa17.48■□□□□ 0.39
HDAC1-208ENST00000482310 ACSBG1Q96GR2 724 aa17.48■□□□□ 0.39
HDAC1-208ENST00000482310 BTAF1O14981 1849 aa17.48■□□□□ 0.39
HDAC1-208ENST00000482310 NHSQ6T4R5 1651 aa17.48■□□□□ 0.39
HDAC1-208ENST00000482310 MPRIPQ6WCQ1 1025 aa17.47■□□□□ 0.39
HDAC1-208ENST00000482310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.47■□□□□ 0.394e-8■□□□□ 9.6
HDAC1-208ENST00000482310 MAP3K5Q99683 1374 aa17.47■□□□□ 0.39
HDAC1-208ENST00000482310 SIPA1L3O60292 1781 aaPredicted RBP17.46■□□□□ 0.39
HDAC1-208ENST00000482310 NFE2L2Q16236 605 aa17.46■□□□□ 0.39
HDAC1-208ENST00000482310 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
HDAC1-208ENST00000482310 KDM6AO15550 1401 aaPredicted RBP17.46■□□□□ 0.39
HDAC1-208ENST00000482310 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
HDAC1-208ENST00000482310 TMPOP42166 694 aaKnown RBP17.45■□□□□ 0.38
HDAC1-208ENST00000482310 RIPK4P57078 832 aa17.45■□□□□ 0.38
HDAC1-208ENST00000482310 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
HDAC1-208ENST00000482310 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
HDAC1-208ENST00000482310 ADAMTS7Q9UKP4 1686 aa17.45■□□□□ 0.38
HDAC1-208ENST00000482310 TNS1Q9HBL0 1735 aaKnown RBP17.44■□□□□ 0.38
HDAC1-208ENST00000482310 GNAT3A8MTJ3 354 aa17.44■□□□□ 0.38
HDAC1-208ENST00000482310 MCM10Q7L590 875 aa17.44■□□□□ 0.38
HDAC1-208ENST00000482310 RTF1Q92541 710 aaKnown RBP17.43■□□□□ 0.38
HDAC1-208ENST00000482310 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
HDAC1-208ENST00000482310 LGR6Q9HBX8 967 aa17.43■□□□□ 0.38
HDAC1-208ENST00000482310 HSP90AB1P08238 724 aaKnown RBP17.41■□□□□ 0.38
HDAC1-208ENST00000482310 RNMTO43148 476 aaKnown RBP17.4■□□□□ 0.38
HDAC1-208ENST00000482310 KCNQ2O43526 872 aa17.4■□□□□ 0.38
HDAC1-208ENST00000482310 TRIM37O94972 964 aa17.4■□□□□ 0.38
HDAC1-208ENST00000482310 FAM196AQ6ZSG2 479 aa17.4■□□□□ 0.38
HDAC1-208ENST00000482310 PTF1AQ7RTS3 328 aa17.4■□□□□ 0.38
HDAC1-208ENST00000482310 DCAF5Q96JK2 942 aa17.4■□□□□ 0.38
HDAC1-208ENST00000482310 PRIM1P49642 420 aaKnown RBP17.39■□□□□ 0.37
HDAC1-208ENST00000482310 CABP4P57796 275 aa17.38■□□□□ 0.37
HDAC1-208ENST00000482310 NKX1-1Q15270 411 aaPredicted RBP17.38■□□□□ 0.37
HDAC1-208ENST00000482310 IL17REQ8NFR9 667 aa17.38■□□□□ 0.37
HDAC1-208ENST00000482310 YTHDC1Q96MU7 727 aaKnown RBP17.38■□□□□ 0.37
HDAC1-208ENST00000482310 PAPPAQ13219 1627 aa17.38■□□□□ 0.37
HDAC1-208ENST00000482310 HNRNPUQ00839 825 aaKnown RBP eCLIP17.37■□□□□ 0.378e-6■□□□□ 9.8
HDAC1-208ENST00000482310 LMOD3Q0VAK6 560 aa17.37■□□□□ 0.37
HDAC1-208ENST00000482310 TMOD3Q9NYL9 352 aa17.37■□□□□ 0.37
HDAC1-208ENST00000482310 TRIM35Q9UPQ4 493 aa17.37■□□□□ 0.37
HDAC1-208ENST00000482310 KDM3BQ7LBC6 1761 aa17.37■□□□□ 0.37
HDAC1-208ENST00000482310 MRC1P22897 1456 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 308 ms