RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 CFAP70Q5T0N1 1121 aa8.84□□□□□ -0.99
NCK1-208ENST00000482071 TMUB1Q9BVT8 246 aa8.84□□□□□ -0.99
NCK1-208ENST00000482071 HIRIP3Q9BW71 556 aaPredicted RBP8.84□□□□□ -0.99
NCK1-208ENST00000482071 ESF1Q9H501 851 aaKnown RBP8.84□□□□□ -0.99
NCK1-208ENST00000482071 PCDHB3Q9Y5E6 796 aa8.84□□□□□ -0.99
NCK1-208ENST00000482071 ZNF142P52746 1687 aaPredicted RBP8.84□□□□□ -0.99
NCK1-208ENST00000482071 RIMS1Q86UR5 1692 aaKnown RBP8.84□□□□□ -0.99
NCK1-208ENST00000482071 ASXL1Q8IXJ9 1541 aa8.84□□□□□ -0.99
NCK1-208ENST00000482071 ALKQ9UM73 1620 aa8.83□□□□□ -1
NCK1-208ENST00000482071 KIF7Q2M1P5 1343 aa8.83□□□□□ -1
NCK1-208ENST00000482071 ST20-MTHFSA0A0A6YYL1 179 aa8.83□□□□□ -1
NCK1-208ENST00000482071 NUTM2FA1L443 756 aa8.83□□□□□ -1
NCK1-208ENST00000482071 NRG2O14511 850 aaPredicted RBP8.83□□□□□ -1
NCK1-208ENST00000482071 SEMA3EO15041 775 aa8.83□□□□□ -1
NCK1-208ENST00000482071 ZNF326Q5BKZ1 582 aaKnown RBP8.83□□□□□ -1
NCK1-208ENST00000482071 MED14O60244 1454 aa8.83□□□□□ -1
NCK1-208ENST00000482071 ARHGEF28Q8N1W1 1705 aaKnown RBP8.83□□□□□ -1
NCK1-208ENST00000482071 RIMS2Q9UQ26 1411 aa8.82□□□□□ -1
NCK1-208ENST00000482071 SLC24A1O60721 1099 aa8.82□□□□□ -1
NCK1-208ENST00000482071 GGCXP38435 758 aa8.82□□□□□ -1
NCK1-208ENST00000482071 FAM161AQ3B820 660 aa8.82□□□□□ -1
NCK1-208ENST00000482071 BLOC1S3Q6QNY0 202 aa8.82□□□□□ -1
NCK1-208ENST00000482071 TMEM2Q9UHN6 1383 aa8.82□□□□□ -1
NCK1-208ENST00000482071 PTPRMP28827 1452 aa8.82□□□□□ -1
NCK1-208ENST00000482071 FCHSD2O94868 740 aa8.81□□□□□ -1
NCK1-208ENST00000482071 DDX10Q13206 875 aaKnown RBP8.81□□□□□ -1
NCK1-208ENST00000482071 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.81□□□□□ -1
NCK1-208ENST00000482071 DLC1Q96QB1 1528 aa8.8□□□□□ -1
NCK1-208ENST00000482071 KNDC1Q76NI1 1749 aa8.8□□□□□ -1
NCK1-208ENST00000482071 ACTN4O43707 911 aaKnown RBP8.8□□□□□ -1
NCK1-208ENST00000482071 CEBPAP49715 358 aaPredicted RBP8.8□□□□□ -1
NCK1-208ENST00000482071 TRAF7Q6Q0C0 670 aa8.8□□□□□ -1
NCK1-208ENST00000482071 PUS7Q96PZ0 661 aaKnown RBP8.8□□□□□ -1
NCK1-208ENST00000482071 CEP170BQ9Y4F5 1589 aaPredicted RBP8.79□□□□□ -1
NCK1-208ENST00000482071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.79□□□□□ -1
NCK1-208ENST00000482071 SLC10A3P09131 477 aa8.79□□□□□ -1
NCK1-208ENST00000482071 SIRT1Q96EB6 747 aa8.79□□□□□ -1
NCK1-208ENST00000482071 QRICH2Q9H0J4 1663 aa8.78□□□□□ -1
NCK1-208ENST00000482071 PLEKHG1Q9ULL1 1385 aa8.78□□□□□ -1
NCK1-208ENST00000482071 RNF223E7ERA6 249 aa8.78□□□□□ -1
NCK1-208ENST00000482071 TLL1O43897 1013 aa8.78□□□□□ -1
NCK1-208ENST00000482071 CFHP08603 1231 aa8.78□□□□□ -1
NCK1-208ENST00000482071 KMT5BQ4FZB7 885 aa8.78□□□□□ -1
NCK1-208ENST00000482071 PXYLP1Q8TE99 480 aa8.78□□□□□ -1
NCK1-208ENST00000482071 TECPR2O15040 1411 aa8.78□□□□□ -1
NCK1-208ENST00000482071 ADAMTS13Q76LX8 1427 aa8.78□□□□□ -1
NCK1-208ENST00000482071 MYOM1P52179 1685 aa8.78□□□□□ -1
NCK1-208ENST00000482071 EIF3AQ14152 1382 aaKnown RBP8.77□□□□□ -1.01
NCK1-208ENST00000482071 ABCC11Q96J66 1382 aa8.77□□□□□ -1.01
NCK1-208ENST00000482071 DISP3Q9P2K9 1392 aa8.77□□□□□ -1.01
NCK1-208ENST00000482071 TESPA1A2RU30 521 aaPredicted RBP8.77□□□□□ -1.01
NCK1-208ENST00000482071 THEMISQ8N1K5 641 aaPredicted RBP8.77□□□□□ -1.01
NCK1-208ENST00000482071 EMID1Q96A84 441 aaPredicted RBP8.77□□□□□ -1.01
NCK1-208ENST00000482071 YTHDC2Q9H6S0 1430 aaKnown RBP8.77□□□□□ -1.01
NCK1-208ENST00000482071 DIP2AQ14689 1571 aa8.77□□□□□ -1.01
NCK1-208ENST00000482071 LRPPRCP42704 1394 aaKnown RBP8.76□□□□□ -1.01
NCK1-208ENST00000482071 PER1O15534 1290 aaPredicted RBP8.76□□□□□ -1.01
NCK1-208ENST00000482071 LTKP29376 864 aa8.76□□□□□ -1.01
NCK1-208ENST00000482071 TMF1P82094 1093 aa8.76□□□□□ -1.01
NCK1-208ENST00000482071 HIC1Q14526 733 aa8.76□□□□□ -1.01
NCK1-208ENST00000482071 PDZRN3Q9UPQ7 1066 aa8.76□□□□□ -1.01
NCK1-208ENST00000482071 OATP04181 439 aa8.75□□□□□ -1.01
NCK1-208ENST00000482071 TMEM132EQ6IEE7 984 aa8.75□□□□□ -1.01
NCK1-208ENST00000482071 METTL3Q86U44 580 aaKnown RBP8.75□□□□□ -1.01
NCK1-208ENST00000482071 CPS1P31327 1500 aa8.75□□□□□ -1.01
NCK1-208ENST00000482071 FAM135BQ49AJ0 1406 aa8.74□□□□□ -1.01
NCK1-208ENST00000482071 CCER2I3L3R5 266 aa8.74□□□□□ -1.01
NCK1-208ENST00000482071 GPR37O15354 613 aa8.74□□□□□ -1.01
NCK1-208ENST00000482071 TBX22Q9Y458 520 aa8.74□□□□□ -1.01
NCK1-208ENST00000482071 CENPJQ9HC77 1338 aaPredicted RBP8.74□□□□□ -1.01
NCK1-208ENST00000482071 PLCB2Q00722 1185 aa8.73□□□□□ -1.01
NCK1-208ENST00000482071 CDCA8Q53HL2 280 aa8.73□□□□□ -1.01
NCK1-208ENST00000482071 TRIM67Q6ZTA4 783 aa8.73□□□□□ -1.01
NCK1-208ENST00000482071 ANKLE1Q8NAG6 615 aa8.73□□□□□ -1.01
NCK1-208ENST00000482071 TULP4Q9NRJ4 1543 aa8.73□□□□□ -1.01
NCK1-208ENST00000482071 CHD2O14647 1828 aaKnown RBP8.73□□□□□ -1.01
NCK1-208ENST00000482071 METP08581 1390 aa8.73□□□□□ -1.01
NCK1-208ENST00000482071 PIK3R4Q99570 1358 aa8.73□□□□□ -1.01
NCK1-208ENST00000482071 XRN1Q8IZH2 1706 aaKnown RBP8.72□□□□□ -1.01
NCK1-208ENST00000482071 S1PR4O95977 384 aa8.72□□□□□ -1.01
NCK1-208ENST00000482071 ADH1BP00325 375 aa8.72□□□□□ -1.01
NCK1-208ENST00000482071 SLC19A1P41440 591 aa8.72□□□□□ -1.01
NCK1-208ENST00000482071 RBM26Q5T8P6 1007 aaKnown RBP8.72□□□□□ -1.01
NCK1-208ENST00000482071 NUTM2DQ5VT03 806 aaPredicted RBP8.72□□□□□ -1.01
NCK1-208ENST00000482071 KTN1Q86UP2 1357 aaKnown RBP8.72□□□□□ -1.01
NCK1-208ENST00000482071 NPC1L1Q9UHC9 1359 aa8.72□□□□□ -1.01
NCK1-208ENST00000482071 TXNDC2Q86VQ3 553 aa8.71□□□□□ -1.02
NCK1-208ENST00000482071 PRKRIP1Q9H875 184 aaPredicted RBP8.71□□□□□ -1.02
NCK1-208ENST00000482071 TRAK1Q9UPV9 953 aa8.71□□□□□ -1.02
NCK1-208ENST00000482071 PTPRUQ92729 1446 aa8.71□□□□□ -1.02
NCK1-208ENST00000482071 ADGRB2O60241 1585 aa8.7□□□□□ -1.02
NCK1-208ENST00000482071 GNPATO15228 680 aa8.7□□□□□ -1.02
NCK1-208ENST00000482071 NR1I2O75469 434 aa8.7□□□□□ -1.02
NCK1-208ENST00000482071 FECHP22830 423 aa8.7□□□□□ -1.02
NCK1-208ENST00000482071 SPRYD7Q5W111 196 aa8.7□□□□□ -1.02
NCK1-208ENST00000482071 EID1Q9Y6B2 187 aa8.7□□□□□ -1.02
NCK1-208ENST00000482071 USP32Q8NFA0 1604 aa8.69□□□□□ -1.02
NCK1-208ENST00000482071 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.69□□□□□ -1.02
NCK1-208ENST00000482071 PPEF1O14829 653 aaPredicted RBP8.69□□□□□ -1.02
NCK1-208ENST00000482071 ANP32CO43423 234 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms