RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 USP35Q9P2H5 1018 aa12.73□□□□□ -0.37
KDM4A-204ENST00000481296 NEFMP07197 916 aa12.72□□□□□ -0.37
KDM4A-204ENST00000481296 RAPGEF4Q8WZA2 1011 aa12.72□□□□□ -0.37
KDM4A-204ENST00000481296 TRPC5Q9UL62 973 aaPredicted RBP12.72□□□□□ -0.37
KDM4A-204ENST00000481296 ITGB4P16144 1822 aa12.72□□□□□ -0.37
KDM4A-204ENST00000481296 ZNF772Q68DY9 489 aaPredicted RBP12.71□□□□□ -0.37
KDM4A-204ENST00000481296 TCP11L2Q8N4U5 519 aa12.71□□□□□ -0.37
KDM4A-204ENST00000481296 RUNDC1Q96C34 613 aa12.71□□□□□ -0.37
KDM4A-204ENST00000481296 THRAP3Q9Y2W1 955 aaKnown RBP12.71□□□□□ -0.37
KDM4A-204ENST00000481296 SBF2Q86WG5 1849 aa12.7□□□□□ -0.38
KDM4A-204ENST00000481296 IL2RBP14784 551 aa12.7□□□□□ -0.38
KDM4A-204ENST00000481296 TATP17735 454 aaPredicted RBP12.7□□□□□ -0.38
KDM4A-204ENST00000481296 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
KDM4A-204ENST00000481296 PHF23Q9BUL5 403 aaPredicted RBP12.7□□□□□ -0.38
KDM4A-204ENST00000481296 BARGINQ6ZT62 677 aa12.68□□□□□ -0.38
KDM4A-204ENST00000481296 KDM3BQ7LBC6 1761 aa12.68□□□□□ -0.38
KDM4A-204ENST00000481296 NHSQ6T4R5 1651 aa12.67□□□□□ -0.38
KDM4A-204ENST00000481296 PAPPAQ13219 1627 aa12.67□□□□□ -0.38
KDM4A-204ENST00000481296 FAM98CQ17RN3 349 aaKnown RBP12.67□□□□□ -0.38
KDM4A-204ENST00000481296 GAS2L2Q8NHY3 880 aa12.67□□□□□ -0.38
KDM4A-204ENST00000481296 GJD4Q96KN9 370 aaPredicted RBP12.67□□□□□ -0.38
KDM4A-204ENST00000481296 CDCA7Q9BWT1 371 aaPredicted RBP12.67□□□□□ -0.38
KDM4A-204ENST00000481296 MAP3K5Q99683 1374 aa12.67□□□□□ -0.38
KDM4A-204ENST00000481296 PCDH11XQ9BZA7 1347 aa12.66□□□□□ -0.38
KDM4A-204ENST00000481296 PCDH11YQ9BZA8 1340 aa12.66□□□□□ -0.38
KDM4A-204ENST00000481296 APAF1O14727 1248 aa12.66□□□□□ -0.38
KDM4A-204ENST00000481296 AMOTQ4VCS5 1084 aa12.66□□□□□ -0.38
KDM4A-204ENST00000481296 PLEKHO1Q53GL0 409 aaPredicted RBP12.66□□□□□ -0.38
KDM4A-204ENST00000481296 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
KDM4A-204ENST00000481296 QTRT2Q9H974 415 aaKnown RBP12.66□□□□□ -0.38
KDM4A-204ENST00000481296 MRC1P22897 1456 aa12.65□□□□□ -0.38
KDM4A-204ENST00000481296 RGS12O14924 1447 aa12.65□□□□□ -0.38
KDM4A-204ENST00000481296 A0A0G2JS52 829 aa12.65□□□□□ -0.38
KDM4A-204ENST00000481296 HNRNPUQ00839 825 aaKnown RBP eCLIP12.65□□□□□ -0.38
KDM4A-204ENST00000481296 MYT1Q01538 1121 aa12.65□□□□□ -0.38
KDM4A-204ENST00000481296 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
KDM4A-204ENST00000481296 MTHFSDQ2M296 383 aaKnown RBP12.65□□□□□ -0.38
KDM4A-204ENST00000481296 ZNF530Q6P9A1 599 aaPredicted RBP12.65□□□□□ -0.38
KDM4A-204ENST00000481296 SPG7Q9UQ90 795 aa12.65□□□□□ -0.38
KDM4A-204ENST00000481296 SENP3-EIF4A1A0A087X0R7 540 aa12.64□□□□□ -0.39
KDM4A-204ENST00000481296 TMPOP42166 694 aaKnown RBP12.64□□□□□ -0.39
KDM4A-204ENST00000481296 YTHDC1Q96MU7 727 aaKnown RBP12.64□□□□□ -0.39
KDM4A-204ENST00000481296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.39
KDM4A-204ENST00000481296 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
KDM4A-204ENST00000481296 KAT6BQ8WYB5 2073 aa12.64□□□□□ -0.39
KDM4A-204ENST00000481296 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
KDM4A-204ENST00000481296 KDM6AO15550 1401 aaPredicted RBP12.63□□□□□ -0.39
KDM4A-204ENST00000481296 BTAF1O14981 1849 aa12.63□□□□□ -0.39
KDM4A-204ENST00000481296 RBM6P78332 1123 aaKnown RBP12.63□□□□□ -0.39
KDM4A-204ENST00000481296 DDB1Q16531 1140 aa12.63□□□□□ -0.39
KDM4A-204ENST00000481296 C1orf141Q5JVX7 400 aa12.63□□□□□ -0.39
KDM4A-204ENST00000481296 ZCRB1Q8TBF4 217 aaKnown RBP12.63□□□□□ -0.39
KDM4A-204ENST00000481296 RGS17Q9UGC6 210 aaPredicted RBP12.63□□□□□ -0.39
KDM4A-204ENST00000481296 LMOD3Q0VAK6 560 aa12.62□□□□□ -0.39
KDM4A-204ENST00000481296 NEUROD2Q15784 382 aa12.62□□□□□ -0.39
KDM4A-204ENST00000481296 LAMB4A4D0S4 1761 aa12.61□□□□□ -0.39
KDM4A-204ENST00000481296 PHKG2P15735 406 aa12.61□□□□□ -0.39
KDM4A-204ENST00000481296 RIPK4P57078 832 aa12.61□□□□□ -0.39
KDM4A-204ENST00000481296 AKAP4Q5JQC9 854 aa12.61□□□□□ -0.39
KDM4A-204ENST00000481296 IFNL2Q8IZJ0 200 aa12.61□□□□□ -0.39
KDM4A-204ENST00000481296 SALL2Q9Y467 1007 aaPredicted RBP12.61□□□□□ -0.39
KDM4A-204ENST00000481296 TNS1Q9HBL0 1735 aaKnown RBP12.61□□□□□ -0.39
KDM4A-204ENST00000481296 ZBED9Q6R2W3 1325 aa12.61□□□□□ -0.39
KDM4A-204ENST00000481296 GNAT3A8MTJ3 354 aa12.6□□□□□ -0.39
KDM4A-204ENST00000481296 EXOC5O00471 708 aa12.6□□□□□ -0.39
KDM4A-204ENST00000481296 CYP27B1O15528 508 aa12.6□□□□□ -0.39
KDM4A-204ENST00000481296 RXRBP28702 533 aa12.6□□□□□ -0.39
KDM4A-204ENST00000481296 POTEAQ6S8J7 498 aa12.6□□□□□ -0.39
KDM4A-204ENST00000481296 NGEFQ8N5V2 710 aa12.6□□□□□ -0.39
KDM4A-204ENST00000481296 C5P01031 1676 aa12.59□□□□□ -0.39
KDM4A-204ENST00000481296 HSP90AB1P08238 724 aaKnown RBP12.59□□□□□ -0.39
KDM4A-204ENST00000481296 CCDC27Q2M243 656 aa12.59□□□□□ -0.39
KDM4A-204ENST00000481296 NCBP3Q53F19 620 aaKnown RBP12.59□□□□□ -0.39
KDM4A-204ENST00000481296 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
KDM4A-204ENST00000481296 DDX54Q8TDD1 881 aaKnown RBP12.59□□□□□ -0.39
KDM4A-204ENST00000481296 RTF1Q92541 710 aaKnown RBP12.59□□□□□ -0.39
KDM4A-204ENST00000481296 CEMIPQ8WUJ3 1361 aa12.58□□□□□ -0.4
KDM4A-204ENST00000481296 ONECUT3O60422 494 aaPredicted RBP12.58□□□□□ -0.4
KDM4A-204ENST00000481296 TRIM35Q9UPQ4 493 aa12.58□□□□□ -0.4
KDM4A-204ENST00000481296 LY75O60449 1722 aa12.57□□□□□ -0.4
KDM4A-204ENST00000481296 HTATSF1O43719 755 aaKnown RBP12.57□□□□□ -0.4
KDM4A-204ENST00000481296 PDE3BQ13370 1112 aa12.57□□□□□ -0.4
KDM4A-204ENST00000481296 MCM10Q7L590 875 aa12.57□□□□□ -0.4
KDM4A-204ENST00000481296 ZNF521Q96K83 1311 aa12.57□□□□□ -0.4
KDM4A-204ENST00000481296 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
KDM4A-204ENST00000481296 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
KDM4A-204ENST00000481296 CICQ96RK0 1608 aaPredicted RBP12.56□□□□□ -0.4
KDM4A-204ENST00000481296 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
KDM4A-204ENST00000481296 MPRIPQ6WCQ1 1025 aa12.56□□□□□ -0.4
KDM4A-204ENST00000481296 WWC1Q8IX03 1113 aa12.56□□□□□ -0.4
KDM4A-204ENST00000481296 MARCH10Q8NA82 808 aaPredicted RBP12.56□□□□□ -0.4
KDM4A-204ENST00000481296 DCAF5Q96JK2 942 aa12.56□□□□□ -0.4
KDM4A-204ENST00000481296 THUMPD2Q9BTF0 503 aaKnown RBP12.56□□□□□ -0.4
KDM4A-204ENST00000481296 BCL9O00512 1426 aa12.55□□□□□ -0.4
KDM4A-204ENST00000481296 TJP1Q07157 1748 aa12.55□□□□□ -0.4
KDM4A-204ENST00000481296 RNMTO43148 476 aaKnown RBP12.55□□□□□ -0.4
KDM4A-204ENST00000481296 CALD1Q05682 793 aaKnown RBP12.55□□□□□ -0.4
KDM4A-204ENST00000481296 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
KDM4A-204ENST00000481296 ZNF831Q5JPB2 1677 aa12.54□□□□□ -0.4
KDM4A-204ENST00000481296 TEFQ10587 303 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms