RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 MCCD1P59942 119 aaPredicted RBP8.38□□□□□ -1.07
COPA-203ENST00000481040 DPYDQ12882 1025 aa8.38□□□□□ -1.07
COPA-203ENST00000481040 CYP4X1Q8N118 509 aa8.38□□□□□ -1.07
COPA-203ENST00000481040 GIPC2Q8TF65 315 aa8.38□□□□□ -1.07
COPA-203ENST00000481040 MRGPRX2Q96LB1 330 aa8.38□□□□□ -1.07
COPA-203ENST00000481040 ZBTB24O43167 697 aaPredicted RBP8.37□□□□□ -1.07
COPA-203ENST00000481040 SMPD1P17405 629 aa8.37□□□□□ -1.07
COPA-203ENST00000481040 KCNH2Q12809 1159 aa8.37□□□□□ -1.07
COPA-203ENST00000481040 EML3Q32P44 896 aa8.37□□□□□ -1.07
COPA-203ENST00000481040 PTCRAQ6ISU1 281 aaPredicted RBP8.37□□□□□ -1.07
COPA-203ENST00000481040 CRIPAKQ8N1N5 446 aa8.37□□□□□ -1.07
COPA-203ENST00000481040 CCDC24Q8N4L8 307 aa8.37□□□□□ -1.07
COPA-203ENST00000481040 OGFOD1Q8N543 542 aa8.37□□□□□ -1.07
COPA-203ENST00000481040 C1orf216Q8TAB5 229 aa8.37□□□□□ -1.07
COPA-203ENST00000481040 GPSM3Q9Y4H4 160 aa8.37□□□□□ -1.07
COPA-203ENST00000481040 ANKRD33BA6NCL7 494 aa8.36□□□□□ -1.07
COPA-203ENST00000481040 J3QL48 77 aa8.36□□□□□ -1.07
COPA-203ENST00000481040 SCNN1AP37088 669 aa8.36□□□□□ -1.07
COPA-203ENST00000481040 PTK2Q05397 1052 aa8.36□□□□□ -1.07
COPA-203ENST00000481040 PTPRNQ16849 979 aa8.36□□□□□ -1.07
COPA-203ENST00000481040 MAP7D1Q3KQU3 841 aa8.36□□□□□ -1.07
COPA-203ENST00000481040 NPAS4Q8IUM7 802 aa8.36□□□□□ -1.07
COPA-203ENST00000481040 CHIC2Q9UKJ5 165 aa8.36□□□□□ -1.07
COPA-203ENST00000481040 PCDHB9Q9Y5E1 797 aa8.36□□□□□ -1.07
COPA-203ENST00000481040 CTHP32929 405 aa8.35□□□□□ -1.07
COPA-203ENST00000481040 PDXDC2PQ6P474 469 aa8.35□□□□□ -1.07
COPA-203ENST00000481040 TRIM50Q86XT4 487 aa8.35□□□□□ -1.07
COPA-203ENST00000481040 ZNF594Q96JF6 807 aaPredicted RBP8.35□□□□□ -1.07
COPA-203ENST00000481040 TCF3P15923 654 aa8.34□□□□□ -1.07
COPA-203ENST00000481040 CLDN10P78369 228 aa8.34□□□□□ -1.07
COPA-203ENST00000481040 OCSTAMPQ9BR26 566 aa8.34□□□□□ -1.07
COPA-203ENST00000481040 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
COPA-203ENST00000481040 TTC24A2A3L6 582 aaPredicted RBP8.33□□□□□ -1.08
COPA-203ENST00000481040 ATP1A2P50993 1020 aa8.33□□□□□ -1.08
COPA-203ENST00000481040 ZNF326Q5BKZ1 582 aaKnown RBP8.33□□□□□ -1.08
COPA-203ENST00000481040 ARMC2Q8NEN0 867 aa8.33□□□□□ -1.08
COPA-203ENST00000481040 GPKOWQ92917 476 aaPredicted RBP eCLIP8.33□□□□□ -1.087e-9■□□□□ 11.2
COPA-203ENST00000481040 GMPR2Q9P2T1 348 aaKnown RBP8.33□□□□□ -1.08
COPA-203ENST00000481040 NOD1Q9Y239 953 aa8.33□□□□□ -1.08
COPA-203ENST00000481040 RC3H1Q5TC82 1133 aaKnown RBP8.32□□□□□ -1.08
COPA-203ENST00000481040 LARGE2Q8N3Y3 721 aa8.32□□□□□ -1.08
COPA-203ENST00000481040 SNIP1Q8TAD8 396 aaKnown RBP8.32□□□□□ -1.08
COPA-203ENST00000481040 NUDT12Q9BQG2 462 aa8.32□□□□□ -1.08
COPA-203ENST00000481040 EGFL7Q9UHF1 273 aa8.32□□□□□ -1.08
COPA-203ENST00000481040 AXIN1O15169 862 aa8.31□□□□□ -1.08
COPA-203ENST00000481040 PRMT3O60678 531 aa8.31□□□□□ -1.08
COPA-203ENST00000481040 ABL1P00519 1130 aa8.31□□□□□ -1.08
COPA-203ENST00000481040 SMCPP49901 116 aaPredicted RBP8.31□□□□□ -1.08
COPA-203ENST00000481040 TAS1R3Q7RTX0 852 aa8.31□□□□□ -1.08
COPA-203ENST00000481040 HPS1Q92902 700 aa8.31□□□□□ -1.08
COPA-203ENST00000481040 DKK1O94907 266 aa8.3□□□□□ -1.08
COPA-203ENST00000481040 HMGB1P09429 215 aaKnown RBP8.3□□□□□ -1.08
COPA-203ENST00000481040 VAMP1P23763 118 aa8.3□□□□□ -1.08
COPA-203ENST00000481040 TSGA10IPQ3SY00 556 aa8.3□□□□□ -1.08
COPA-203ENST00000481040 SIX5Q8N196 739 aa8.3□□□□□ -1.08
COPA-203ENST00000481040 CXXC1Q9P0U4 656 aaPredicted RBP8.3□□□□□ -1.08
COPA-203ENST00000481040 H3BRB1 525 aa8.29□□□□□ -1.08
COPA-203ENST00000481040 ZBTB7BO15156 539 aaPredicted RBP8.29□□□□□ -1.08
COPA-203ENST00000481040 CCNYL3P0C7X3 344 aa8.29□□□□□ -1.08
COPA-203ENST00000481040 OCLNQ16625 522 aa8.29□□□□□ -1.08
COPA-203ENST00000481040 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
COPA-203ENST00000481040 NBPF14Q5TI25 921 aa8.29□□□□□ -1.08
COPA-203ENST00000481040 ADAM32Q8TC27 787 aa8.29□□□□□ -1.08
COPA-203ENST00000481040 PRIMPOLQ96LW4 560 aa8.29□□□□□ -1.08
COPA-203ENST00000481040 TUT1Q9H6E5 874 aaKnown RBP8.29□□□□□ -1.08
COPA-203ENST00000481040 EVA1BQ9NVM1 165 aa8.29□□□□□ -1.08
COPA-203ENST00000481040 KIAA1024Q9UPX6 916 aa8.29□□□□□ -1.08
COPA-203ENST00000481040 SIAH2O43255 324 aa8.28□□□□□ -1.08
COPA-203ENST00000481040 ICMTO60725 284 aa8.28□□□□□ -1.08
COPA-203ENST00000481040 SEC13P55735 322 aa8.28□□□□□ -1.08
COPA-203ENST00000481040 WNT7BP56706 349 aa8.28□□□□□ -1.08
COPA-203ENST00000481040 ZNF211Q13398 564 aaPredicted RBP8.28□□□□□ -1.08
COPA-203ENST00000481040 CTC1Q2NKJ3 1217 aa8.28□□□□□ -1.08
COPA-203ENST00000481040 FBXO33Q7Z6M2 555 aa8.28□□□□□ -1.08
COPA-203ENST00000481040 ARHGAP9Q9BRR9 750 aa8.28□□□□□ -1.08
COPA-203ENST00000481040 ANO2Q9NQ90 1003 aa8.28□□□□□ -1.08
COPA-203ENST00000481040 DOLKQ9UPQ8 538 aa8.28□□□□□ -1.08
COPA-203ENST00000481040 RBM19Q9Y4C8 960 aaKnown RBP8.28□□□□□ -1.08
COPA-203ENST00000481040 SH3BP2P78314 561 aa8.27□□□□□ -1.09
COPA-203ENST00000481040 GTF2IP78347 998 aa8.27□□□□□ -1.09
COPA-203ENST00000481040 GLYCTKQ8IVS8 523 aa8.27□□□□□ -1.09
COPA-203ENST00000481040 PUS7Q96PZ0 661 aaKnown RBP8.27□□□□□ -1.09
COPA-203ENST00000481040 HSP90B1P14625 803 aaKnown RBP8.26□□□□□ -1.09
COPA-203ENST00000481040 MAPK1P28482 360 aa8.26□□□□□ -1.09
COPA-203ENST00000481040 CCDC102BQ68D86 513 aa8.26□□□□□ -1.09
COPA-203ENST00000481040 C8orf37Q96NL8 207 aa8.26□□□□□ -1.09
COPA-203ENST00000481040 CCDC85AQ96PX6 553 aaPredicted RBP8.26□□□□□ -1.09
COPA-203ENST00000481040 TAGLNQ01995 201 aaKnown RBP8.25□□□□□ -1.09
COPA-203ENST00000481040 LINC01559Q495D7 138 aa8.25□□□□□ -1.09
COPA-203ENST00000481040 OXLD1Q5BKU9 147 aa8.25□□□□□ -1.09
COPA-203ENST00000481040 ZBTB33Q86T24 672 aa8.25□□□□□ -1.09
COPA-203ENST00000481040 DZIP3Q86Y13 1208 aaKnown RBP8.25□□□□□ -1.09
COPA-203ENST00000481040 ASB16Q96NS5 453 aa8.25□□□□□ -1.09
COPA-203ENST00000481040 UNC93B1Q9H1C4 597 aa8.25□□□□□ -1.09
COPA-203ENST00000481040 ATP13A2Q9NQ11 1180 aa8.25□□□□□ -1.09
COPA-203ENST00000481040 SFI1A8K8P3 1242 aa8.24□□□□□ -1.09
COPA-203ENST00000481040 C21orf2O43822 256 aa8.24□□□□□ -1.09
COPA-203ENST00000481040 SNRPBP14678 240 aaKnown RBP8.24□□□□□ -1.09
COPA-203ENST00000481040 TPCN2Q8NHX9 752 aa8.24□□□□□ -1.09
COPA-203ENST00000481040 DCTN4Q9UJW0 460 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms