RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 EMILIN1Q9Y6C2 1016 aa10.45□□□□□ -0.74
VPS50-215ENST00000480943 KIAA0586Q9BVV6 1533 aa10.44□□□□□ -0.74
VPS50-215ENST00000480943 GRM5P41594 1212 aa10.44□□□□□ -0.74
VPS50-215ENST00000480943 PDE4DQ08499 809 aa10.44□□□□□ -0.74
VPS50-215ENST00000480943 ALYREFQ86V81 257 aaKnown RBP10.44□□□□□ -0.74
VPS50-215ENST00000480943 KIF13AQ9H1H9 1805 aa10.44□□□□□ -0.74
VPS50-215ENST00000480943 CARMIL1Q5VZK9 1371 aa10.43□□□□□ -0.74
VPS50-215ENST00000480943 FURINP09958 794 aa10.43□□□□□ -0.74
VPS50-215ENST00000480943 FDX1P10109 184 aa10.43□□□□□ -0.74
VPS50-215ENST00000480943 SH3RF1Q7Z6J0 888 aa10.43□□□□□ -0.74
VPS50-215ENST00000480943 KRTAP4-12Q9BQ66 201 aa10.43□□□□□ -0.74
VPS50-215ENST00000480943 BEGAINQ9BUH8 593 aa10.43□□□□□ -0.74
VPS50-215ENST00000480943 IQGAP2Q13576 1575 aa10.43□□□□□ -0.74
VPS50-215ENST00000480943 DESI1Q6ICB0 168 aa10.42□□□□□ -0.74
VPS50-215ENST00000480943 SPIRE2Q8WWL2 714 aa10.42□□□□□ -0.74
VPS50-215ENST00000480943 ADCY10Q96PN6 1610 aa10.41□□□□□ -0.74
VPS50-215ENST00000480943 AGERQ15109 404 aa10.41□□□□□ -0.74
VPS50-215ENST00000480943 CTHP32929 405 aa10.4□□□□□ -0.74
VPS50-215ENST00000480943 RAPGEF2Q9Y4G8 1499 aa10.39□□□□□ -0.75
VPS50-215ENST00000480943 SPINT1O43278 529 aa10.39□□□□□ -0.75
VPS50-215ENST00000480943 BPHLQ86WA6 291 aaPredicted RBP10.39□□□□□ -0.75
VPS50-215ENST00000480943 FOXJ1Q92949 421 aa10.39□□□□□ -0.75
VPS50-215ENST00000480943 SPDYE5A6NIY4 337 aa10.37□□□□□ -0.75
VPS50-215ENST00000480943 BCRP11274 1271 aa10.37□□□□□ -0.75
VPS50-215ENST00000480943 MOXD2PA6NHM9 499 aa10.36□□□□□ -0.75
VPS50-215ENST00000480943 FSHRP23945 695 aa10.36□□□□□ -0.75
VPS50-215ENST00000480943 DIXDC1Q155Q3 683 aa10.36□□□□□ -0.75
VPS50-215ENST00000480943 PRR7Q8TB68 274 aa10.36□□□□□ -0.75
VPS50-215ENST00000480943 TBC1D2Q9BYX2 928 aa10.36□□□□□ -0.75
VPS50-215ENST00000480943 LRRC4BQ9NT99 713 aa10.36□□□□□ -0.75
VPS50-215ENST00000480943 NDUFV2P19404 249 aa10.35□□□□□ -0.75
VPS50-215ENST00000480943 CCDC116Q8IYX3 515 aa10.35□□□□□ -0.75
VPS50-215ENST00000480943 MBIPQ9NS73 344 aa10.35□□□□□ -0.75
VPS50-215ENST00000480943 MAP4K5Q9Y4K4 846 aa10.35□□□□□ -0.75
VPS50-215ENST00000480943 KIAA0556O60303 1618 aa10.34□□□□□ -0.75
VPS50-215ENST00000480943 PCDHGC3Q9UN70 934 aa10.34□□□□□ -0.75
VPS50-215ENST00000480943 CARMIL2Q6F5E8 1435 aa10.33□□□□□ -0.76
VPS50-215ENST00000480943 MAPKBP1O60336 1514 aa10.33□□□□□ -0.76
VPS50-215ENST00000480943 PGPEP1Q9NXJ5 209 aa10.33□□□□□ -0.76
VPS50-215ENST00000480943 TSPOAP1O95153 1857 aa10.33□□□□□ -0.76
VPS50-215ENST00000480943 DISP1Q96F81 1524 aa10.33□□□□□ -0.76
VPS50-215ENST00000480943 UGGT2Q9NYU1 1516 aa10.33□□□□□ -0.76
VPS50-215ENST00000480943 DIP2BQ9P265 1576 aa10.32□□□□□ -0.76
VPS50-215ENST00000480943 GAS6Q14393 721 aa10.32□□□□□ -0.76
VPS50-215ENST00000480943 FOXR1Q6PIV2 292 aa10.32□□□□□ -0.76
VPS50-215ENST00000480943 TTBK1Q5TCY1 1321 aaPredicted RBP10.32□□□□□ -0.76
VPS50-215ENST00000480943 VASH1Q7L8A9 365 aaPredicted RBP10.31□□□□□ -0.76
VPS50-215ENST00000480943 KRTAP9-9Q9BYP9 154 aa10.31□□□□□ -0.76
VPS50-215ENST00000480943 KRTAP9-4Q9BYQ2 154 aa10.31□□□□□ -0.76
VPS50-215ENST00000480943 TNIKQ9UKE5 1360 aa10.3□□□□□ -0.76
VPS50-215ENST00000480943 KRBA1A5PL33 1030 aa10.3□□□□□ -0.76
VPS50-215ENST00000480943 RSBN1LQ6PCB5 846 aaPredicted RBP10.3□□□□□ -0.76
VPS50-215ENST00000480943 Q6ZVU0 165 aa10.3□□□□□ -0.76
VPS50-215ENST00000480943 PTPRGP23470 1445 aa10.3□□□□□ -0.76
VPS50-215ENST00000480943 PRXQ9BXM0 1461 aa10.3□□□□□ -0.76
VPS50-215ENST00000480943 GJA5P36382 358 aa10.29□□□□□ -0.76
VPS50-215ENST00000480943 MTMR2Q13614 643 aa10.29□□□□□ -0.76
VPS50-215ENST00000480943 GMCL1Q96IK5 515 aa10.29□□□□□ -0.76
VPS50-215ENST00000480943 KRTAP4-8A0A0G2JLE6 195 aa10.28□□□□□ -0.76
VPS50-215ENST00000480943 ZCCHC11Q5TAX3 1644 aaKnown RBP10.28□□□□□ -0.76
VPS50-215ENST00000480943 ABCC10Q5T3U5 1492 aa10.28□□□□□ -0.76
VPS50-215ENST00000480943 ABCC2Q92887 1545 aa10.28□□□□□ -0.76
VPS50-215ENST00000480943 ZMYM1Q5SVZ6 1142 aa10.27□□□□□ -0.77
VPS50-215ENST00000480943 LYPD8Q6UX82 237 aa10.27□□□□□ -0.77
VPS50-215ENST00000480943 MKL2Q9ULH7 1088 aa10.27□□□□□ -0.77
VPS50-215ENST00000480943 C4orf48Q5BLP8 95 aa10.26□□□□□ -0.77
VPS50-215ENST00000480943 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
VPS50-215ENST00000480943 KDM4CQ9H3R0 1056 aa10.26□□□□□ -0.77
VPS50-215ENST00000480943 GPBP1L1Q9HC44 474 aaPredicted RBP10.26□□□□□ -0.77
VPS50-215ENST00000480943 UHRF1BP1LA0JNW5 1464 aa10.25□□□□□ -0.77
VPS50-215ENST00000480943 GOLGA3Q08378 1498 aa10.25□□□□□ -0.77
VPS50-215ENST00000480943 MYSM1Q5VVJ2 828 aa10.25□□□□□ -0.77
VPS50-215ENST00000480943 C1QTNF2Q9BXJ5 285 aa10.25□□□□□ -0.77
VPS50-215ENST00000480943 NSFL1CQ9UNZ2 370 aaKnown RBP10.25□□□□□ -0.77
VPS50-215ENST00000480943 UACAQ9BZF9 1416 aa10.24□□□□□ -0.77
VPS50-215ENST00000480943 SENP3-EIF4A1A0A087X0R7 540 aa10.24□□□□□ -0.77
VPS50-215ENST00000480943 TRMT44Q8IYL2 757 aaKnown RBP10.24□□□□□ -0.77
VPS50-215ENST00000480943 ARMC2Q8NEN0 867 aa10.24□□□□□ -0.77
VPS50-215ENST00000480943 POLMQ9NP87 494 aaPredicted RBP10.24□□□□□ -0.77
VPS50-215ENST00000480943 PCDHB15Q9Y5E8 787 aa10.24□□□□□ -0.77
VPS50-215ENST00000480943 EEA1Q15075 1411 aa10.24□□□□□ -0.77
VPS50-215ENST00000480943 PPRC1Q5VV67 1664 aaKnown RBP10.23□□□□□ -0.77
VPS50-215ENST00000480943 CTSOP43234 321 aaPredicted RBP10.23□□□□□ -0.77
VPS50-215ENST00000480943 ZBTB3Q9H5J0 574 aa10.23□□□□□ -0.77
VPS50-215ENST00000480943 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
VPS50-215ENST00000480943 KIF21BO75037 1637 aa10.22□□□□□ -0.77
VPS50-215ENST00000480943 FAM69CQ0P6D2 419 aa10.22□□□□□ -0.77
VPS50-215ENST00000480943 CBLBQ13191 982 aa10.22□□□□□ -0.77
VPS50-215ENST00000480943 CSPP1Q1MSJ5 1256 aa10.22□□□□□ -0.77
VPS50-215ENST00000480943 PPP1R26Q5T8A7 1209 aaPredicted RBP10.22□□□□□ -0.77
VPS50-215ENST00000480943 PRPF38BQ5VTL8 546 aaKnown RBP10.22□□□□□ -0.77
VPS50-215ENST00000480943 RSPH6AQ9H0K4 717 aa10.22□□□□□ -0.77
VPS50-215ENST00000480943 LIMD1Q9UGP4 676 aa10.22□□□□□ -0.77
VPS50-215ENST00000480943 ABCA8O94911 1581 aa10.22□□□□□ -0.77
VPS50-215ENST00000480943 KDM6BO15054 1643 aa10.22□□□□□ -0.77
VPS50-215ENST00000480943 HRCP23327 699 aa10.21□□□□□ -0.77
VPS50-215ENST00000480943 RNF217Q8TC41 542 aa10.21□□□□□ -0.77
VPS50-215ENST00000480943 ACDQ96AP0 544 aa10.21□□□□□ -0.77
VPS50-215ENST00000480943 KDM5BQ9UGL1 1544 aa10.21□□□□□ -0.78
VPS50-215ENST00000480943 F12P00748 615 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms