RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 HDGFL1Q5TGJ6 251 aa6.24□□□□□ -1.41
UBE2F-221ENST00000480828 RGS22Q8NE09 1264 aa6.24□□□□□ -1.41
UBE2F-221ENST00000480828 PRM3Q9NNZ6 103 aa6.24□□□□□ -1.41
UBE2F-221ENST00000480828 TMPRSS4Q9NRS4 437 aa6.24□□□□□ -1.41
UBE2F-221ENST00000480828 PGPEP1Q9NXJ5 209 aa6.24□□□□□ -1.41
UBE2F-221ENST00000480828 MTMR7Q9Y216 660 aa6.24□□□□□ -1.41
UBE2F-221ENST00000480828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.23□□□□□ -1.41
UBE2F-221ENST00000480828 SOCS7O14512 581 aa6.23□□□□□ -1.41
UBE2F-221ENST00000480828 ADD1P35611 737 aaKnown RBP6.23□□□□□ -1.41
UBE2F-221ENST00000480828 MFAP1P55081 439 aaKnown RBP6.23□□□□□ -1.41
UBE2F-221ENST00000480828 ZNF784Q8NCA9 323 aaPredicted RBP6.23□□□□□ -1.41
UBE2F-221ENST00000480828 AGBL1Q96MI9 1066 aa6.23□□□□□ -1.41
UBE2F-221ENST00000480828 ACIN1Q9UKV3 1341 aaKnown RBP6.23□□□□□ -1.41
UBE2F-221ENST00000480828 CARNS1A5YM72 827 aa6.22□□□□□ -1.41
UBE2F-221ENST00000480828 ERVH48-1M5A8F1 160 aa6.22□□□□□ -1.41
UBE2F-221ENST00000480828 UPP2O95045 317 aa6.22□□□□□ -1.41
UBE2F-221ENST00000480828 FBXO45P0C2W1 286 aa6.22□□□□□ -1.41
UBE2F-221ENST00000480828 DHX9Q08211 1270 aaKnown RBP6.22□□□□□ -1.41
UBE2F-221ENST00000480828 NDUFB9Q9Y6M9 179 aa6.22□□□□□ -1.41
UBE2F-221ENST00000480828 TTLL8A6PVC2 850 aa6.21□□□□□ -1.42
UBE2F-221ENST00000480828 CTSOP43234 321 aaPredicted RBP6.21□□□□□ -1.42
UBE2F-221ENST00000480828 NBPF20Q3BBV1 942 aa6.21□□□□□ -1.42
UBE2F-221ENST00000480828 CFAP70Q5T0N1 1121 aa6.21□□□□□ -1.42
UBE2F-221ENST00000480828 FOXD4L5Q5VV16 416 aaPredicted RBP6.21□□□□□ -1.42
UBE2F-221ENST00000480828 FOXD4L4Q8WXT5 416 aaPredicted RBP6.21□□□□□ -1.42
UBE2F-221ENST00000480828 PBXIP1Q96AQ6 731 aa6.21□□□□□ -1.42
UBE2F-221ENST00000480828 ZNF428Q96B54 188 aa6.21□□□□□ -1.42
UBE2F-221ENST00000480828 KRT76Q01546 638 aa6.2□□□□□ -1.42
UBE2F-221ENST00000480828 PTSQ03393 145 aa6.2□□□□□ -1.42
UBE2F-221ENST00000480828 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.2□□□□□ -1.42
UBE2F-221ENST00000480828 GPR161Q8N6U8 529 aaKnown RBP6.2□□□□□ -1.42
UBE2F-221ENST00000480828 ZSCAN1Q8NBB4 408 aa6.2□□□□□ -1.42
UBE2F-221ENST00000480828 SLC35F4A4IF30 521 aa6.19□□□□□ -1.42
UBE2F-221ENST00000480828 FIGNL2A6NMB9 653 aa6.19□□□□□ -1.42
UBE2F-221ENST00000480828 ZBBXA8MT70 800 aa6.19□□□□□ -1.42
UBE2F-221ENST00000480828 ADH1AP07327 375 aa6.19□□□□□ -1.42
UBE2F-221ENST00000480828 RELBQ01201 579 aa6.19□□□□□ -1.42
UBE2F-221ENST00000480828 VAC14Q08AM6 782 aa6.19□□□□□ -1.42
UBE2F-221ENST00000480828 INSM2Q96T92 566 aaPredicted RBP6.19□□□□□ -1.42
UBE2F-221ENST00000480828 SENP3-EIF4A1A0A087X0R7 540 aa6.18□□□□□ -1.42
UBE2F-221ENST00000480828 GIGYF1O75420 1035 aaPredicted RBP6.18□□□□□ -1.42
UBE2F-221ENST00000480828 RAB15P59190 212 aa6.18□□□□□ -1.42
UBE2F-221ENST00000480828 SRPK2P78362 688 aaKnown RBP6.18□□□□□ -1.42
UBE2F-221ENST00000480828 DZIP3Q86Y13 1208 aaKnown RBP6.18□□□□□ -1.42
UBE2F-221ENST00000480828 SEPT12Q8IYM1 358 aa6.18□□□□□ -1.42
UBE2F-221ENST00000480828 PNMA1Q8ND90 353 aa6.18□□□□□ -1.42
UBE2F-221ENST00000480828 RNF217Q8TC41 542 aa6.18□□□□□ -1.42
UBE2F-221ENST00000480828 CCDC155Q8N6L0 562 aa6.17□□□□□ -1.42
UBE2F-221ENST00000480828 NANOS1Q8WY41 292 aaKnown RBP6.17□□□□□ -1.42
UBE2F-221ENST00000480828 PPP1R12CQ9BZL4 782 aa6.17□□□□□ -1.42
UBE2F-221ENST00000480828 ZNF395Q9H8N7 513 aaPredicted RBP6.17□□□□□ -1.42
UBE2F-221ENST00000480828 CSB-PGBD3P0DP91 1061 aa6.16□□□□□ -1.42
UBE2F-221ENST00000480828 PTGIRP43119 386 aa6.16□□□□□ -1.42
UBE2F-221ENST00000480828 PDE4CQ08493 712 aa6.16□□□□□ -1.42
UBE2F-221ENST00000480828 WASHC4Q2M389 1173 aa6.16□□□□□ -1.42
UBE2F-221ENST00000480828 PALM3A6NDB9 673 aaPredicted RBP6.15□□□□□ -1.42
UBE2F-221ENST00000480828 BRD1O95696 1058 aa6.15□□□□□ -1.42
UBE2F-221ENST00000480828 LMOD1P29536 600 aaPredicted RBP6.15□□□□□ -1.42
UBE2F-221ENST00000480828 RBM25P49756 843 aaKnown RBP6.15□□□□□ -1.42
UBE2F-221ENST00000480828 NR1H3Q13133 447 aa6.15□□□□□ -1.42
UBE2F-221ENST00000480828 CDCA8Q53HL2 280 aa6.15□□□□□ -1.42
UBE2F-221ENST00000480828 UCN2Q96RP3 112 aa6.15□□□□□ -1.42
UBE2F-221ENST00000480828 ALG2Q9H553 416 aa6.15□□□□□ -1.42
UBE2F-221ENST00000480828 CYLDQ9NQC7 956 aa6.15□□□□□ -1.42
UBE2F-221ENST00000480828 USTQ9Y2C2 406 aa6.15□□□□□ -1.42
UBE2F-221ENST00000480828 PCDHB9Q9Y5E1 797 aa6.15□□□□□ -1.42
UBE2F-221ENST00000480828 ERVK-9P63128 1117 aa6.14□□□□□ -1.43
UBE2F-221ENST00000480828 KCNA1Q09470 495 aa6.14□□□□□ -1.43
UBE2F-221ENST00000480828 RNFT1Q5M7Z0 435 aa6.14□□□□□ -1.43
UBE2F-221ENST00000480828 TFIP11Q9UBB9 837 aaKnown RBP6.14□□□□□ -1.43
UBE2F-221ENST00000480828 SCTRP47872 440 aa6.13□□□□□ -1.43
UBE2F-221ENST00000480828 POLMQ9NP87 494 aaPredicted RBP6.13□□□□□ -1.43
UBE2F-221ENST00000480828 ITGA6P23229 1130 aa6.12□□□□□ -1.43
UBE2F-221ENST00000480828 CUEDC1Q9NWM3 386 aaPredicted RBP6.12□□□□□ -1.43
UBE2F-221ENST00000480828 PATL2C9JE40 543 aaKnown RBP6.11□□□□□ -1.43
UBE2F-221ENST00000480828 GSK3AP49840 483 aa6.11□□□□□ -1.43
UBE2F-221ENST00000480828 RNF144AP50876 292 aaPredicted RBP6.11□□□□□ -1.43
UBE2F-221ENST00000480828 OSBPL3Q9H4L5 887 aa6.11□□□□□ -1.43
UBE2F-221ENST00000480828 IVNS1ABPQ9Y6Y0 642 aa6.11□□□□□ -1.43
UBE2F-221ENST00000480828 TMEM88BA6NKF7 163 aa6.1□□□□□ -1.43
UBE2F-221ENST00000480828 CC2D2BQ6DHV5 1058 aa6.1□□□□□ -1.43
UBE2F-221ENST00000480828 TBC1D9Q6ZT07 1266 aa6.1□□□□□ -1.43
UBE2F-221ENST00000480828 CNTNAP3BQ96NU0 1288 aa6.1□□□□□ -1.43
UBE2F-221ENST00000480828 COL25A1Q9BXS0 654 aaPredicted RBP6.1□□□□□ -1.43
UBE2F-221ENST00000480828 CNTNAP3Q9BZ76 1288 aa6.1□□□□□ -1.43
UBE2F-221ENST00000480828 MAFBQ9Y5Q3 323 aaPredicted RBP6.1□□□□□ -1.43
UBE2F-221ENST00000480828 ATP5J2-PTCD1G3V325 749 aa6.09□□□□□ -1.43
UBE2F-221ENST00000480828 LYSMD3Q7Z3D4 306 aa6.09□□□□□ -1.43
UBE2F-221ENST00000480828 VWA5B2Q8N398 1253 aa6.09□□□□□ -1.43
UBE2F-221ENST00000480828 VRTNQ9H8Y1 702 aa6.09□□□□□ -1.43
UBE2F-221ENST00000480828 A0A1W2PRU2 124 aa6.08□□□□□ -1.44
UBE2F-221ENST00000480828 FAM181BA6NEQ2 426 aa6.08□□□□□ -1.44
UBE2F-221ENST00000480828 ATG7O95352 703 aa6.08□□□□□ -1.44
UBE2F-221ENST00000480828 SLURP2P0DP57 97 aa6.08□□□□□ -1.44
UBE2F-221ENST00000480828 RHOQP17081 205 aa6.08□□□□□ -1.44
UBE2F-221ENST00000480828 SEMA3FQ13275 785 aa6.08□□□□□ -1.44
UBE2F-221ENST00000480828 GAS6Q14393 721 aa6.08□□□□□ -1.44
UBE2F-221ENST00000480828 CCDC125Q86Z20 511 aa6.08□□□□□ -1.44
UBE2F-221ENST00000480828 CCDC85AQ96PX6 553 aaPredicted RBP6.08□□□□□ -1.44
UBE2F-221ENST00000480828 GPC1P35052 558 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms