RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
TRA2B-212ENST00000480461 RALBP1Q15311 655 aa16.56■□□□□ 0.24
TRA2B-212ENST00000480461 WNK3Q9BYP7 1800 aa16.56■□□□□ 0.24
TRA2B-212ENST00000480461 RGPD5Q99666 1765 aa16.56■□□□□ 0.24
TRA2B-212ENST00000480461 WDR17Q8IZU2 1322 aa16.55■□□□□ 0.24
TRA2B-212ENST00000480461 EIF4A2Q14240 407 aaKnown RBP16.55■□□□□ 0.24
TRA2B-212ENST00000480461 NBPF6Q5VWK0 638 aa16.55■□□□□ 0.24
TRA2B-212ENST00000480461 PTF1AQ7RTS3 328 aa16.55■□□□□ 0.24
TRA2B-212ENST00000480461 NBPF4Q96M43 638 aa16.55■□□□□ 0.24
TRA2B-212ENST00000480461 RTL1A6NKG5 1358 aa16.54■□□□□ 0.24
TRA2B-212ENST00000480461 IL13P35225 146 aa16.53■□□□□ 0.24
TRA2B-212ENST00000480461 TOM1L2Q6ZVM7 507 aa16.53■□□□□ 0.24
TRA2B-212ENST00000480461 PROM2Q8N271 834 aa16.53■□□□□ 0.24
TRA2B-212ENST00000480461 BCL11BQ9C0K0 894 aaPredicted RBP16.53■□□□□ 0.24
TRA2B-212ENST00000480461 ABCC6O95255 1503 aa16.52■□□□□ 0.24
TRA2B-212ENST00000480461 CSB-PGBD3P0DP91 1061 aa16.52■□□□□ 0.24
TRA2B-212ENST00000480461 C1QTNF8P60827 252 aa16.52■□□□□ 0.24
TRA2B-212ENST00000480461 CARD10Q9BWT7 1032 aa16.52■□□□□ 0.24
TRA2B-212ENST00000480461 FHDC1Q9C0D6 1143 aaPredicted RBP16.52■□□□□ 0.24
TRA2B-212ENST00000480461 NLRP2Q9NX02 1062 aa16.52■□□□□ 0.24
TRA2B-212ENST00000480461 CHD4Q14839 1912 aa16.52■□□□□ 0.23
TRA2B-212ENST00000480461 BCL9O00512 1426 aa16.52■□□□□ 0.23
TRA2B-212ENST00000480461 DDB1Q16531 1140 aa16.51■□□□□ 0.23
TRA2B-212ENST00000480461 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
TRA2B-212ENST00000480461 EYA1Q99502 592 aa16.51■□□□□ 0.23
TRA2B-212ENST00000480461 SYT17Q9BSW7 474 aa16.51■□□□□ 0.23
TRA2B-212ENST00000480461 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
TRA2B-212ENST00000480461 USHBP1Q8N6Y0 703 aa16.5■□□□□ 0.23
TRA2B-212ENST00000480461 SGIP1Q9BQI5 828 aa16.49■□□□□ 0.23
TRA2B-212ENST00000480461 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
TRA2B-212ENST00000480461 MYBBP1AQ9BQG0 1328 aaKnown RBP16.48■□□□□ 0.23
TRA2B-212ENST00000480461 MARCH10Q8NA82 808 aaPredicted RBP16.48■□□□□ 0.23
TRA2B-212ENST00000480461 ANP32CO43423 234 aa16.47■□□□□ 0.23
TRA2B-212ENST00000480461 DIAPH1O60610 1272 aaKnown RBP16.47■□□□□ 0.23
TRA2B-212ENST00000480461 SLC15A2Q16348 729 aa16.47■□□□□ 0.23
TRA2B-212ENST00000480461 IFFO2Q5TF58 517 aa16.47■□□□□ 0.23
TRA2B-212ENST00000480461 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
TRA2B-212ENST00000480461 MTFR1LQ9H019 292 aa16.47■□□□□ 0.23
TRA2B-212ENST00000480461 STK32BQ9NY57 414 aa16.47■□□□□ 0.23
TRA2B-212ENST00000480461 PAPPAQ13219 1627 aa16.46■□□□□ 0.23
TRA2B-212ENST00000480461 TXNRD1Q16881 649 aa16.46■□□□□ 0.23
TRA2B-212ENST00000480461 AEBP1Q8IUX7 1158 aa16.45■□□□□ 0.22
TRA2B-212ENST00000480461 MAP3K5Q99683 1374 aa16.45■□□□□ 0.22
TRA2B-212ENST00000480461 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
TRA2B-212ENST00000480461 RGPD2P0DJD1 1756 aa16.44■□□□□ 0.22
TRA2B-212ENST00000480461 CFAP53Q96M91 514 aa16.43■□□□□ 0.22
TRA2B-212ENST00000480461 NCAPD2Q15021 1401 aa16.43■□□□□ 0.22
TRA2B-212ENST00000480461 NHSQ6T4R5 1651 aa16.43■□□□□ 0.22
TRA2B-212ENST00000480461 CEP350Q5VT06 3117 aa16.42■□□□□ 0.22
TRA2B-212ENST00000480461 SULT6B1Q6IMI4 303 aa16.42■□□□□ 0.22
TRA2B-212ENST00000480461 CDCA7Q9BWT1 371 aaPredicted RBP16.42■□□□□ 0.22
TRA2B-212ENST00000480461 HMOX1P09601 288 aa16.41■□□□□ 0.22
TRA2B-212ENST00000480461 IL2RBP14784 551 aa16.41■□□□□ 0.22
TRA2B-212ENST00000480461 ARXQ96QS3 562 aa16.41■□□□□ 0.22
TRA2B-212ENST00000480461 TNS2Q63HR2 1409 aa16.41■□□□□ 0.22
TRA2B-212ENST00000480461 FAM208AQ9UK61 1670 aaKnown RBP16.4■□□□□ 0.22
TRA2B-212ENST00000480461 U2SURPO15042 1029 aaKnown RBP16.4■□□□□ 0.22
TRA2B-212ENST00000480461 MIER1Q8N108 512 aa16.4■□□□□ 0.22
TRA2B-212ENST00000480461 GOLGB1Q14789 3259 aaKnown RBP16.4■□□□□ 0.22
TRA2B-212ENST00000480461 GIGYF1O75420 1035 aaPredicted RBP16.39■□□□□ 0.21
TRA2B-212ENST00000480461 MEGF6O75095 1541 aa16.39■□□□□ 0.21
TRA2B-212ENST00000480461 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.21
TRA2B-212ENST00000480461 KDRP35968 1356 aa16.38■□□□□ 0.21
TRA2B-212ENST00000480461 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
TRA2B-212ENST00000480461 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
TRA2B-212ENST00000480461 EXOC5O00471 708 aa16.36■□□□□ 0.21
TRA2B-212ENST00000480461 TATP17735 454 aaPredicted RBP16.36■□□□□ 0.21
TRA2B-212ENST00000480461 POTEDQ86YR6 584 aa16.36■□□□□ 0.21
TRA2B-212ENST00000480461 PNISRQ8TF01 805 aaKnown RBP16.36■□□□□ 0.21
TRA2B-212ENST00000480461 RAPGEF4Q8WZA2 1011 aa16.36■□□□□ 0.21
TRA2B-212ENST00000480461 PHACTR3Q96KR7 559 aa16.36■□□□□ 0.21
TRA2B-212ENST00000480461 RSPH6AQ9H0K4 717 aa16.36■□□□□ 0.21
TRA2B-212ENST00000480461 ADAMTS8Q9UP79 889 aa16.36■□□□□ 0.21
TRA2B-212ENST00000480461 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
TRA2B-212ENST00000480461 GPR162Q16538 588 aa16.35■□□□□ 0.21
TRA2B-212ENST00000480461 ZCRB1Q8TBF4 217 aaKnown RBP16.35■□□□□ 0.21
TRA2B-212ENST00000480461 BTAF1O14981 1849 aa16.35■□□□□ 0.21
TRA2B-212ENST00000480461 COL24A1Q17RW2 1714 aa16.34■□□□□ 0.21
TRA2B-212ENST00000480461 FCHSD2O94868 740 aa16.34■□□□□ 0.21
TRA2B-212ENST00000480461 ZNF827Q17R98 1081 aa16.34■□□□□ 0.21
TRA2B-212ENST00000480461 QSER1Q2KHR3 1735 aa16.33■□□□□ 0.21
TRA2B-212ENST00000480461 CYP27B1O15528 508 aa16.33■□□□□ 0.2
TRA2B-212ENST00000480461 DDX54Q8TDD1 881 aaKnown RBP16.33■□□□□ 0.2
TRA2B-212ENST00000480461 PLEKHF1Q96S99 279 aa16.33■□□□□ 0.2
TRA2B-212ENST00000480461 MRS2Q9HD23 443 aa16.33■□□□□ 0.2
TRA2B-212ENST00000480461 PRKAR2BP31323 418 aa16.32■□□□□ 0.2
TRA2B-212ENST00000480461 ACSBG1Q96GR2 724 aa16.32■□□□□ 0.2
TRA2B-212ENST00000480461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.25e-8■■□□□ 13.7
TRA2B-212ENST00000480461 MTHFSDQ2M296 383 aaKnown RBP16.31■□□□□ 0.2
TRA2B-212ENST00000480461 LRRC4BQ9NT99 713 aa16.3■□□□□ 0.2
TRA2B-212ENST00000480461 TUBGCP6Q96RT7 1819 aa16.29■□□□□ 0.2
TRA2B-212ENST00000480461 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
TRA2B-212ENST00000480461 KLHL34Q8N239 644 aa16.29■□□□□ 0.2
TRA2B-212ENST00000480461 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
TRA2B-212ENST00000480461 CCER2I3L3R5 266 aa16.28■□□□□ 0.2
TRA2B-212ENST00000480461 PHKG2P15735 406 aa16.28■□□□□ 0.2
TRA2B-212ENST00000480461 CCDC146Q8IYE0 955 aa16.28■□□□□ 0.2
TRA2B-212ENST00000480461 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
TRA2B-212ENST00000480461 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.2
TRA2B-212ENST00000480461 NKX1-1Q15270 411 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms