RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-206ENST00000479994 NFAT5O94916 1531 aa15.48■□□□□ 0.07
HCLS1-206ENST00000479994 FAM208AQ9UK61 1670 aaKnown RBP15.48■□□□□ 0.07
HCLS1-206ENST00000479994 ZNF526Q8TF50 670 aaPredicted RBP15.48■□□□□ 0.07
HCLS1-206ENST00000479994 PPP2R1AP30153 589 aa15.47■□□□□ 0.07
HCLS1-206ENST00000479994 PARP4Q9UKK3 1724 aaKnown RBP15.47■□□□□ 0.07
HCLS1-206ENST00000479994 YBX3P16989 372 aaKnown RBP eCLIP15.46■□□□□ 0.07
HCLS1-206ENST00000479994 KLHL34Q8N239 644 aa15.46■□□□□ 0.07
HCLS1-206ENST00000479994 CPDO75976 1380 aa15.46■□□□□ 0.07
HCLS1-206ENST00000479994 PCNTO95613 3336 aa15.45■□□□□ 0.06
HCLS1-206ENST00000479994 GRIN3BO60391 1043 aa15.45■□□□□ 0.06
HCLS1-206ENST00000479994 GCP02774 474 aa15.45■□□□□ 0.06
HCLS1-206ENST00000479994 CHRNA2Q15822 529 aa15.45■□□□□ 0.06
HCLS1-206ENST00000479994 INSRP06213 1382 aa15.45■□□□□ 0.06
HCLS1-206ENST00000479994 FLT4P35916 1363 aa15.45■□□□□ 0.06
HCLS1-206ENST00000479994 NLGN2Q8NFZ4 835 aa15.44■□□□□ 0.06
HCLS1-206ENST00000479994 ADCY9O60503 1353 aa15.44■□□□□ 0.06
HCLS1-206ENST00000479994 OVOS2A0A0G2JMS6 1433 aa15.43■□□□□ 0.06
HCLS1-206ENST00000479994 WDR90Q96KV7 1748 aa15.43■□□□□ 0.06
HCLS1-206ENST00000479994 CNGB1Q14028 1251 aaPredicted RBP15.43■□□□□ 0.06
HCLS1-206ENST00000479994 TXNRD1Q16881 649 aa15.43■□□□□ 0.06
HCLS1-206ENST00000479994 MIER1Q8N108 512 aa15.43■□□□□ 0.06
HCLS1-206ENST00000479994 KIAA0232Q92628 1395 aa15.43■□□□□ 0.06
HCLS1-206ENST00000479994 KIF3CO14782 793 aa15.42■□□□□ 0.06
HCLS1-206ENST00000479994 TNNT2P45379 298 aaPredicted RBP15.42■□□□□ 0.06
HCLS1-206ENST00000479994 NUTM2GQ5VZR2 741 aa15.42■□□□□ 0.06
HCLS1-206ENST00000479994 TCP11L2Q8N4U5 519 aa15.42■□□□□ 0.06
HCLS1-206ENST00000479994 JMYQ8N9B5 988 aa15.42■□□□□ 0.06
HCLS1-206ENST00000479994 POLKQ9UBT6 870 aa15.42■□□□□ 0.06
HCLS1-206ENST00000479994 NUDCQ9Y266 331 aa15.42■□□□□ 0.06
HCLS1-206ENST00000479994 AMPHP49418 695 aa15.41■□□□□ 0.06
HCLS1-206ENST00000479994 MTHFSP49914 203 aa15.41■□□□□ 0.06
HCLS1-206ENST00000479994 COL24A1Q17RW2 1714 aa15.4■□□□□ 0.06
HCLS1-206ENST00000479994 COL18A1P39060 1754 aa15.4■□□□□ 0.06
HCLS1-206ENST00000479994 RGPD5Q99666 1765 aa15.4■□□□□ 0.06
HCLS1-206ENST00000479994 ARHGEF25Q86VW2 580 aa15.4■□□□□ 0.06
HCLS1-206ENST00000479994 MRS2Q9HD23 443 aa15.4■□□□□ 0.06
HCLS1-206ENST00000479994 WWC3Q9ULE0 1092 aa15.4■□□□□ 0.06
HCLS1-206ENST00000479994 LARP1Q6PKG0 1096 aaKnown RBP15.39■□□□□ 0.05
HCLS1-206ENST00000479994 IP6K1Q92551 441 aa15.39■□□□□ 0.05
HCLS1-206ENST00000479994 PNNQ9H307 717 aaKnown RBP15.39■□□□□ 0.05
HCLS1-206ENST00000479994 MAP3K19Q56UN5 1328 aa15.39■□□□□ 0.05
HCLS1-206ENST00000479994 EVA1CP58658 441 aa15.38■□□□□ 0.05
HCLS1-206ENST00000479994 KLRG1Q96E93 195 aa15.38■□□□□ 0.05
HCLS1-206ENST00000479994 LMO7Q8WWI1 1683 aa15.38■□□□□ 0.05
HCLS1-206ENST00000479994 PPM1GO15355 546 aaPredicted RBP15.37■□□□□ 0.05
HCLS1-206ENST00000479994 DIAPH1O60610 1272 aaKnown RBP15.37■□□□□ 0.05
HCLS1-206ENST00000479994 WDR43Q15061 677 aaKnown RBP eCLIP15.37■□□□□ 0.05
HCLS1-206ENST00000479994 COL3A1P02461 1466 aaPredicted RBP15.36■□□□□ 0.05
HCLS1-206ENST00000479994 SOX12O15370 315 aa15.36■□□□□ 0.05
HCLS1-206ENST00000479994 HOXC9P31274 260 aa15.36■□□□□ 0.05
HCLS1-206ENST00000479994 RRS1Q15050 365 aaKnown RBP15.36■□□□□ 0.05
HCLS1-206ENST00000479994 LRRC37A3O60309 1634 aa15.35■□□□□ 0.05
HCLS1-206ENST00000479994 THRAP3Q9Y2W1 955 aaKnown RBP15.35■□□□□ 0.05
HCLS1-206ENST00000479994 EMILIN1Q9Y6C2 1016 aa15.35■□□□□ 0.05
HCLS1-206ENST00000479994 PAPPAQ13219 1627 aa15.35■□□□□ 0.05
HCLS1-206ENST00000479994 ZC3H6P61129 1189 aaKnown RBP15.34■□□□□ 0.05
HCLS1-206ENST00000479994 HTRA3P83110 453 aa15.34■□□□□ 0.05
HCLS1-206ENST00000479994 PLEKHG2Q9H7P9 1386 aa15.34■□□□□ 0.05
HCLS1-206ENST00000479994 NEFMP07197 916 aa15.32■□□□□ 0.04
HCLS1-206ENST00000479994 POLD1P28340 1107 aa15.32■□□□□ 0.04
HCLS1-206ENST00000479994 PNISRQ8TF01 805 aaKnown RBP15.31■□□□□ 0.04
HCLS1-206ENST00000479994 ZBTB7CA1YPR0 619 aa15.3■□□□□ 0.04
HCLS1-206ENST00000479994 TOMM70O94826 608 aa15.3■□□□□ 0.04
HCLS1-206ENST00000479994 RGPD2P0DJD1 1756 aa15.29■□□□□ 0.04
HCLS1-206ENST00000479994 COL5A2P05997 1499 aaPredicted RBP15.29■□□□□ 0.04
HCLS1-206ENST00000479994 ERBB3P21860 1342 aa15.29■□□□□ 0.04
HCLS1-206ENST00000479994 IL13P35225 146 aa15.29■□□□□ 0.04
HCLS1-206ENST00000479994 ZNF827Q17R98 1081 aa15.29■□□□□ 0.04
HCLS1-206ENST00000479994 HSP90AB2PQ58FF8 381 aa15.29■□□□□ 0.04
HCLS1-206ENST00000479994 NGEFQ8N5V2 710 aa15.29■□□□□ 0.04
HCLS1-206ENST00000479994 QSER1Q2KHR3 1735 aa15.29■□□□□ 0.04
HCLS1-206ENST00000479994 BCL9O00512 1426 aa15.28■□□□□ 0.04
HCLS1-206ENST00000479994 FCHSD2O94868 740 aa15.28■□□□□ 0.04
HCLS1-206ENST00000479994 EIF4A2Q14240 407 aaKnown RBP15.28■□□□□ 0.04
HCLS1-206ENST00000479994 DDB1Q16531 1140 aa15.28■□□□□ 0.04
HCLS1-206ENST00000479994 MARCH10Q8NA82 808 aaPredicted RBP15.28■□□□□ 0.04
HCLS1-206ENST00000479994 ANKRD24Q8TF21 1146 aa15.28■□□□□ 0.04
HCLS1-206ENST00000479994 SLC16A10Q8TF71 515 aa15.28■□□□□ 0.04
HCLS1-206ENST00000479994 WDR17Q8IZU2 1322 aa15.27■□□□□ 0.04
HCLS1-206ENST00000479994 U2SURPO15042 1029 aaKnown RBP15.27■□□□□ 0.04
HCLS1-206ENST00000479994 U2AF1L5P0DN76 240 aaPredicted RBP15.27■□□□□ 0.04
HCLS1-206ENST00000479994 FBLN1P23142 703 aa15.27■□□□□ 0.04
HCLS1-206ENST00000479994 U2AF1Q01081 240 aaKnown RBP eCLIP15.27■□□□□ 0.04
HCLS1-206ENST00000479994 WNK3Q9BYP7 1800 aa15.27■□□□□ 0.03
HCLS1-206ENST00000479994 NCAPD2Q15021 1401 aa15.26■□□□□ 0.03
HCLS1-206ENST00000479994 IGSF1Q8N6C5 1336 aa15.26■□□□□ 0.03
HCLS1-206ENST00000479994 CSB-PGBD3P0DP91 1061 aa15.26■□□□□ 0.03
HCLS1-206ENST00000479994 CRB1P82279 1406 aa15.26■□□□□ 0.03
HCLS1-206ENST00000479994 TNS2Q63HR2 1409 aa15.26■□□□□ 0.03
HCLS1-206ENST00000479994 KDRP35968 1356 aa15.25■□□□□ 0.03
HCLS1-206ENST00000479994 MAPK8IP3Q9UPT6 1336 aa15.24■□□□□ 0.03
HCLS1-206ENST00000479994 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
HCLS1-206ENST00000479994 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
HCLS1-206ENST00000479994 TUBGCP6Q96RT7 1819 aa15.23■□□□□ 0.03
HCLS1-206ENST00000479994 HSPA1AP0DMV8 641 aaKnown RBP15.23■□□□□ 0.03
HCLS1-206ENST00000479994 HSPA1BP0DMV9 641 aaKnown RBP15.23■□□□□ 0.03
HCLS1-206ENST00000479994 CCDC184Q52MB2 194 aa15.23■□□□□ 0.03
HCLS1-206ENST00000479994 CARD10Q9BWT7 1032 aa15.23■□□□□ 0.03
HCLS1-206ENST00000479994 AXIN2Q9Y2T1 843 aa15.23■□□□□ 0.03
HCLS1-206ENST00000479994 RUNDC1Q96C34 613 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms