RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 ANKRD44Q8N8A2 993 aa25.32■■□□□ 1.64
COL13A1-208ENST00000479733 CD163L1Q9NR16 1453 aa25.32■■□□□ 1.64
COL13A1-208ENST00000479733 GDPD2Q9HCC8 539 aa25.31■■□□□ 1.64
COL13A1-208ENST00000479733 LMTK2Q8IWU2 1503 aa25.31■■□□□ 1.64
COL13A1-208ENST00000479733 CSPP1Q1MSJ5 1256 aa25.3■■□□□ 1.64
COL13A1-208ENST00000479733 DNTTIP2Q5QJE6 756 aaKnown RBP25.3■■□□□ 1.64
COL13A1-208ENST00000479733 CEP85Q6P2H3 762 aa25.3■■□□□ 1.64
COL13A1-208ENST00000479733 JARID2Q92833 1246 aaPredicted RBP25.3■■□□□ 1.64
COL13A1-208ENST00000479733 TMX3Q96JJ7 454 aa25.3■■□□□ 1.64
COL13A1-208ENST00000479733 ZRANB1Q9UGI0 708 aa25.3■■□□□ 1.64
COL13A1-208ENST00000479733 KIDINS220Q9ULH0 1771 aa25.3■■□□□ 1.64
COL13A1-208ENST00000479733 ABCA9Q8IUA7 1624 aa25.3■■□□□ 1.64
COL13A1-208ENST00000479733 ARHGAP31Q2M1Z3 1444 aa25.3■■□□□ 1.64
COL13A1-208ENST00000479733 ERC2O15083 957 aa25.29■■□□□ 1.64
COL13A1-208ENST00000479733 MEIS3Q99687 375 aa25.29■■□□□ 1.64
COL13A1-208ENST00000479733 MAP7D2Q96T17 732 aa25.29■■□□□ 1.64
COL13A1-208ENST00000479733 PRDM10Q9NQV6 1147 aa25.28■■□□□ 1.64
COL13A1-208ENST00000479733 ZNF830Q96NB3 372 aaPredicted RBP25.28■■□□□ 1.64
COL13A1-208ENST00000479733 ASXL2Q76L83 1435 aa25.27■■□□□ 1.64
COL13A1-208ENST00000479733 RRS1Q15050 365 aaKnown RBP25.26■■□□□ 1.63
COL13A1-208ENST00000479733 TSC1Q92574 1164 aa25.26■■□□□ 1.63
COL13A1-208ENST00000479733 IL13P35225 146 aa25.26■■□□□ 1.63
COL13A1-208ENST00000479733 SASS6Q6UVJ0 657 aa25.26■■□□□ 1.63
COL13A1-208ENST00000479733 RPAP2Q8IXW5 612 aaPredicted RBP25.25■■□□□ 1.63
COL13A1-208ENST00000479733 DYNC1I1O14576 645 aa25.25■■□□□ 1.63
COL13A1-208ENST00000479733 TSPY26PQ9H489 355 aa25.25■■□□□ 1.63
COL13A1-208ENST00000479733 NME9Q86XW9 330 aa25.24■■□□□ 1.63
COL13A1-208ENST00000479733 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.24■■□□□ 1.63
COL13A1-208ENST00000479733 MBD3O95983 291 aa25.24■■□□□ 1.63
COL13A1-208ENST00000479733 MCM5P33992 734 aa25.24■■□□□ 1.63
COL13A1-208ENST00000479733 WAPLQ7Z5K2 1190 aa25.24■■□□□ 1.63
COL13A1-208ENST00000479733 KNDC1Q76NI1 1749 aa25.24■■□□□ 1.63
COL13A1-208ENST00000479733 SLC4A10Q6U841 1118 aa25.23■■□□□ 1.63
COL13A1-208ENST00000479733 YTHDC2Q9H6S0 1430 aaKnown RBP25.23■■□□□ 1.63
COL13A1-208ENST00000479733 ZFYVE9O95405 1425 aa25.23■■□□□ 1.63
COL13A1-208ENST00000479733 PRDM4Q9UKN5 801 aa25.23■■□□□ 1.63
COL13A1-208ENST00000479733 GADD45BO75293 160 aaPredicted RBP25.23■■□□□ 1.63
COL13A1-208ENST00000479733 MSH6P52701 1360 aa25.22■■□□□ 1.63
COL13A1-208ENST00000479733 PALD1Q9ULE6 856 aa25.22■■□□□ 1.63
COL13A1-208ENST00000479733 ATP10DQ9P241 1426 aa25.21■■□□□ 1.63
COL13A1-208ENST00000479733 KIAA2012Q0VF49 1180 aa25.21■■□□□ 1.63
COL13A1-208ENST00000479733 NEXMIFQ5QGS0 1516 aa25.21■■□□□ 1.63
COL13A1-208ENST00000479733 LMOD3Q0VAK6 560 aa25.21■■□□□ 1.63
COL13A1-208ENST00000479733 C17orf53Q8N3J3 647 aaPredicted RBP25.21■■□□□ 1.63
COL13A1-208ENST00000479733 UPF3BQ9BZI7 483 aaKnown RBP25.21■■□□□ 1.63
COL13A1-208ENST00000479733 BRD1O95696 1058 aa25.2■■□□□ 1.62
COL13A1-208ENST00000479733 EXOC6BQ9Y2D4 811 aa25.2■■□□□ 1.62
COL13A1-208ENST00000479733 NPM1P06748 294 aaKnown RBP eCLIP25.19■■□□□ 1.62
COL13A1-208ENST00000479733 MCM10Q7L590 875 aa25.19■■□□□ 1.62
COL13A1-208ENST00000479733 ABCC3O15438 1527 aa25.19■■□□□ 1.62
COL13A1-208ENST00000479733 RTL1A6NKG5 1358 aa25.19■■□□□ 1.62
COL13A1-208ENST00000479733 PDE1AP54750 535 aa25.19■■□□□ 1.62
COL13A1-208ENST00000479733 ANO2Q9NQ90 1003 aa25.19■■□□□ 1.62
COL13A1-208ENST00000479733 RIMS2Q9UQ26 1411 aa25.19■■□□□ 1.62
COL13A1-208ENST00000479733 FAM177BA6PVY3 158 aa25.19■■□□□ 1.62
COL13A1-208ENST00000479733 RAPGEF3O95398 923 aa25.19■■□□□ 1.62
COL13A1-208ENST00000479733 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.19■■□□□ 1.62
COL13A1-208ENST00000479733 RILPL2Q969X0 211 aa25.19■■□□□ 1.62
COL13A1-208ENST00000479733 PTPRMP28827 1452 aa25.18■■□□□ 1.62
COL13A1-208ENST00000479733 F6X3S4 739 aa25.18■■□□□ 1.62
COL13A1-208ENST00000479733 AEBP1Q8IUX7 1158 aa25.17■■□□□ 1.62
COL13A1-208ENST00000479733 MIS18AQ9NYP9 233 aa25.17■■□□□ 1.62
COL13A1-208ENST00000479733 USP25Q9UHP3 1055 aa25.17■■□□□ 1.62
COL13A1-208ENST00000479733 REREQ9P2R6 1566 aa25.17■■□□□ 1.62
COL13A1-208ENST00000479733 SLC4A2P04920 1241 aa25.17■■□□□ 1.62
COL13A1-208ENST00000479733 TRIM6-TRIM34B2RNG4 842 aa25.16■■□□□ 1.62
COL13A1-208ENST00000479733 PLCB2Q00722 1185 aa25.16■■□□□ 1.62
COL13A1-208ENST00000479733 TTC12Q9H892 705 aaPredicted RBP25.16■■□□□ 1.62
COL13A1-208ENST00000479733 USP48Q86UV5 1035 aa25.15■■□□□ 1.62
COL13A1-208ENST00000479733 SYAP1Q96A49 352 aaPredicted RBP25.15■■□□□ 1.62
COL13A1-208ENST00000479733 ESYT1Q9BSJ8 1104 aa25.13■■□□□ 1.61
COL13A1-208ENST00000479733 NCKAP5LQ9HCH0 1330 aa25.13■■□□□ 1.61
COL13A1-208ENST00000479733 KIF24Q5T7B8 1368 aa25.13■■□□□ 1.61
COL13A1-208ENST00000479733 MTERF4Q7Z6M4 381 aaKnown RBP25.13■■□□□ 1.61
COL13A1-208ENST00000479733 STAG3Q9UJ98 1225 aa25.13■■□□□ 1.61
COL13A1-208ENST00000479733 HMMRO75330 724 aa25.13■■□□□ 1.61
COL13A1-208ENST00000479733 ZHX1Q9UKY1 873 aaPredicted RBP25.13■■□□□ 1.61
COL13A1-208ENST00000479733 FRMPD1Q5SYB0 1578 aa25.12■■□□□ 1.61
COL13A1-208ENST00000479733 SULT6B1Q6IMI4 303 aa25.12■■□□□ 1.61
COL13A1-208ENST00000479733 SIGLEC1Q9BZZ2 1709 aa25.12■■□□□ 1.61
COL13A1-208ENST00000479733 ANKRD26Q9UPS8 1709 aa25.12■■□□□ 1.61
COL13A1-208ENST00000479733 POGZQ7Z3K3 1410 aa25.12■■□□□ 1.61
COL13A1-208ENST00000479733 LARP6Q9BRS8 491 aaKnown RBP25.11■■□□□ 1.61
COL13A1-208ENST00000479733 DTNBO60941 627 aa25.11■■□□□ 1.61
COL13A1-208ENST00000479733 MCCP23508 829 aa25.11■■□□□ 1.61
COL13A1-208ENST00000479733 G2E3Q7L622 706 aa25.11■■□□□ 1.61
COL13A1-208ENST00000479733 RGS12O14924 1447 aa25.11■■□□□ 1.61
COL13A1-208ENST00000479733 CUL4AQ13619 759 aa25.1■■□□□ 1.61
COL13A1-208ENST00000479733 MAP2P11137 1827 aaKnown RBP25.1■■□□□ 1.61
COL13A1-208ENST00000479733 CDC42BPGQ6DT37 1551 aa25.1■■□□□ 1.61
COL13A1-208ENST00000479733 MCM2P49736 904 aa25.09■■□□□ 1.61
COL13A1-208ENST00000479733 HCLS1P14317 486 aaPredicted RBP25.09■■□□□ 1.61
COL13A1-208ENST00000479733 NOLC1Q14978 699 aaKnown RBP eCLIP25.09■■□□□ 1.61
COL13A1-208ENST00000479733 MYRIPQ8NFW9 859 aa25.09■■□□□ 1.61
COL13A1-208ENST00000479733 COG3Q96JB2 828 aa25.09■■□□□ 1.61
COL13A1-208ENST00000479733 ARHGEF40Q8TER5 1519 aa25.09■■□□□ 1.61
COL13A1-208ENST00000479733 ADCY5O95622 1261 aa25.09■■□□□ 1.61
COL13A1-208ENST00000479733 FBXO31Q5XUX0 539 aaPredicted RBP25.09■■□□□ 1.61
COL13A1-208ENST00000479733 SLC52A1Q9NWF4 448 aa25.09■■□□□ 1.61
COL13A1-208ENST00000479733 YEATS2Q9ULM3 1422 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms