RNA–Protein interactions for RNA: ENST00000477468.1

MKL1-209, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 2

Gene MKL1, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-209ENST00000477468 MRC1P22897 1456 aa12.28□□□□□ -0.44
MKL1-209ENST00000477468 BRWD3Q6RI45 1802 aa12.28□□□□□ -0.44
MKL1-209ENST00000477468 CCDC146Q8IYE0 955 aa12.28□□□□□ -0.44
MKL1-209ENST00000477468 PLEKHF1Q96S99 279 aa12.28□□□□□ -0.44
MKL1-209ENST00000477468 PAPPAQ13219 1627 aa12.27□□□□□ -0.44
MKL1-209ENST00000477468 IL2RBP14784 551 aa12.27□□□□□ -0.45
MKL1-209ENST00000477468 TATP17735 454 aaPredicted RBP12.27□□□□□ -0.45
MKL1-209ENST00000477468 TCP11L2Q8N4U5 519 aa12.27□□□□□ -0.45
MKL1-209ENST00000477468 CDCA7Q9BWT1 371 aaPredicted RBP12.27□□□□□ -0.45
MKL1-209ENST00000477468 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.45
MKL1-209ENST00000477468 CCDC9Q9Y3X0 531 aaKnown RBP12.27□□□□□ -0.45
MKL1-209ENST00000477468 KDM3BQ7LBC6 1761 aa12.27□□□□□ -0.45
MKL1-209ENST00000477468 MAP3K5Q99683 1374 aa12.27□□□□□ -0.45
MKL1-209ENST00000477468 ITGB4P16144 1822 aa12.26□□□□□ -0.45
MKL1-209ENST00000477468 HNRNPUQ00839 825 aaKnown RBP eCLIP12.26□□□□□ -0.45
MKL1-209ENST00000477468 ZNF772Q68DY9 489 aaPredicted RBP12.26□□□□□ -0.45
MKL1-209ENST00000477468 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
MKL1-209ENST00000477468 GAS2L2Q8NHY3 880 aa12.26□□□□□ -0.45
MKL1-209ENST00000477468 USP35Q9P2H5 1018 aa12.26□□□□□ -0.45
MKL1-209ENST00000477468 PCDH11XQ9BZA7 1347 aa12.26□□□□□ -0.45
MKL1-209ENST00000477468 PCDH11YQ9BZA8 1340 aa12.26□□□□□ -0.45
MKL1-209ENST00000477468 NHSQ6T4R5 1651 aa12.26□□□□□ -0.45
MKL1-209ENST00000477468 LMOD3Q0VAK6 560 aa12.25□□□□□ -0.45
MKL1-209ENST00000477468 AMOTQ4VCS5 1084 aa12.25□□□□□ -0.45
MKL1-209ENST00000477468 BARGINQ6ZT62 677 aa12.25□□□□□ -0.45
MKL1-209ENST00000477468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.25□□□□□ -0.45
MKL1-209ENST00000477468 ZBED9Q6R2W3 1325 aa12.25□□□□□ -0.45
MKL1-209ENST00000477468 NFE2L2Q16236 605 aa12.24□□□□□ -0.45
MKL1-209ENST00000477468 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
MKL1-209ENST00000477468 SBF2Q86WG5 1849 aa12.23□□□□□ -0.45
MKL1-209ENST00000477468 APAF1O14727 1248 aa12.23□□□□□ -0.45
MKL1-209ENST00000477468 PLEKHO1Q53GL0 409 aaPredicted RBP12.23□□□□□ -0.45
MKL1-209ENST00000477468 ILDR1Q86SU0 546 aaPredicted RBP12.23□□□□□ -0.45
MKL1-209ENST00000477468 PHF23Q9BUL5 403 aaPredicted RBP12.23□□□□□ -0.45
MKL1-209ENST00000477468 SPG7Q9UQ90 795 aa12.23□□□□□ -0.45
MKL1-209ENST00000477468 UBR2Q8IWV8 1755 aa12.23□□□□□ -0.45
MKL1-209ENST00000477468 KDM6AO15550 1401 aaPredicted RBP12.22□□□□□ -0.45
MKL1-209ENST00000477468 TMPOP42166 694 aaKnown RBP12.22□□□□□ -0.45
MKL1-209ENST00000477468 C1orf141Q5JVX7 400 aa12.22□□□□□ -0.45
MKL1-209ENST00000477468 ZNF530Q6P9A1 599 aaPredicted RBP12.22□□□□□ -0.45
MKL1-209ENST00000477468 GJD4Q96KN9 370 aaPredicted RBP12.22□□□□□ -0.45
MKL1-209ENST00000477468 PHACTR3Q96KR7 559 aa12.22□□□□□ -0.45
MKL1-209ENST00000477468 YTHDC1Q96MU7 727 aaKnown RBP12.22□□□□□ -0.45
MKL1-209ENST00000477468 LAMB4A4D0S4 1761 aa12.22□□□□□ -0.45
MKL1-209ENST00000477468 CCDC27Q2M243 656 aa12.21□□□□□ -0.45
MKL1-209ENST00000477468 MTHFSDQ2M296 383 aaKnown RBP12.21□□□□□ -0.45
MKL1-209ENST00000477468 RGS12O14924 1447 aa12.2□□□□□ -0.46
MKL1-209ENST00000477468 FAM98CQ17RN3 349 aaKnown RBP12.2□□□□□ -0.46
MKL1-209ENST00000477468 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
MKL1-209ENST00000477468 RRP7AQ9Y3A4 280 aaKnown RBP12.2□□□□□ -0.46
MKL1-209ENST00000477468 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
MKL1-209ENST00000477468 A0A0G2JS52 829 aa12.19□□□□□ -0.46
MKL1-209ENST00000477468 HSP90AB1P08238 724 aaKnown RBP12.19□□□□□ -0.46
MKL1-209ENST00000477468 MYT1Q01538 1121 aa12.19□□□□□ -0.46
MKL1-209ENST00000477468 DDB1Q16531 1140 aa12.19□□□□□ -0.46
MKL1-209ENST00000477468 ZCRB1Q8TBF4 217 aaKnown RBP12.19□□□□□ -0.46
MKL1-209ENST00000477468 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
MKL1-209ENST00000477468 BTAF1O14981 1849 aa12.18□□□□□ -0.46
MKL1-209ENST00000477468 ZNF521Q96K83 1311 aa12.18□□□□□ -0.46
MKL1-209ENST00000477468 GNAT3A8MTJ3 354 aa12.18□□□□□ -0.46
MKL1-209ENST00000477468 HTATSF1O43719 755 aaKnown RBP12.18□□□□□ -0.46
MKL1-209ENST00000477468 PHKG2P15735 406 aa12.18□□□□□ -0.46
MKL1-209ENST00000477468 RIPK4P57078 832 aa12.18□□□□□ -0.46
MKL1-209ENST00000477468 CALD1Q05682 793 aaKnown RBP12.18□□□□□ -0.46
MKL1-209ENST00000477468 NEUROD2Q15784 382 aa12.18□□□□□ -0.46
MKL1-209ENST00000477468 IFNL2Q8IZJ0 200 aa12.18□□□□□ -0.46
MKL1-209ENST00000477468 RTF1Q92541 710 aaKnown RBP12.18□□□□□ -0.46
MKL1-209ENST00000477468 RGPD3A6NKT7 1758 aaPredicted RBP12.18□□□□□ -0.46
MKL1-209ENST00000477468 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
MKL1-209ENST00000477468 TNS1Q9HBL0 1735 aaKnown RBP12.17□□□□□ -0.46
MKL1-209ENST00000477468 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
MKL1-209ENST00000477468 QTRT2Q9H974 415 aaKnown RBP12.17□□□□□ -0.46
MKL1-209ENST00000477468 BCL9O00512 1426 aa12.17□□□□□ -0.46
MKL1-209ENST00000477468 C5P01031 1676 aa12.16□□□□□ -0.46
MKL1-209ENST00000477468 CYP27B1O15528 508 aa12.16□□□□□ -0.46
MKL1-209ENST00000477468 WWC1Q8IX03 1113 aa12.16□□□□□ -0.46
MKL1-209ENST00000477468 ZNF831Q5JPB2 1677 aa12.16□□□□□ -0.46
MKL1-209ENST00000477468 IL16Q14005 1332 aa12.15□□□□□ -0.46
MKL1-209ENST00000477468 SENP3-EIF4A1A0A087X0R7 540 aa12.15□□□□□ -0.46
MKL1-209ENST00000477468 EXOC5O00471 708 aa12.15□□□□□ -0.46
MKL1-209ENST00000477468 DCAF5Q96JK2 942 aa12.15□□□□□ -0.46
MKL1-209ENST00000477468 TRIM35Q9UPQ4 493 aa12.15□□□□□ -0.46
MKL1-209ENST00000477468 SALL2Q9Y467 1007 aaPredicted RBP12.15□□□□□ -0.46
MKL1-209ENST00000477468 ONECUT3O60422 494 aaPredicted RBP12.14□□□□□ -0.47
MKL1-209ENST00000477468 PDE3BQ13370 1112 aa12.14□□□□□ -0.47
MKL1-209ENST00000477468 LY75O60449 1722 aa12.14□□□□□ -0.47
MKL1-209ENST00000477468 RXRBP28702 533 aa12.13□□□□□ -0.47
MKL1-209ENST00000477468 GOLGA2Q08379 1002 aa12.13□□□□□ -0.47
MKL1-209ENST00000477468 NKX1-1Q15270 411 aaPredicted RBP12.13□□□□□ -0.47
MKL1-209ENST00000477468 MCM10Q7L590 875 aa12.13□□□□□ -0.47
MKL1-209ENST00000477468 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
MKL1-209ENST00000477468 SEPT12Q8IYM1 358 aa12.13□□□□□ -0.47
MKL1-209ENST00000477468 RGS17Q9UGC6 210 aaPredicted RBP12.13□□□□□ -0.47
MKL1-209ENST00000477468 KAT6BQ8WYB5 2073 aa12.12□□□□□ -0.47
MKL1-209ENST00000477468 COL5A3P25940 1745 aaPredicted RBP12.12□□□□□ -0.47
MKL1-209ENST00000477468 TJP1Q07157 1748 aa12.12□□□□□ -0.47
MKL1-209ENST00000477468 RNMTO43148 476 aaKnown RBP12.12□□□□□ -0.47
MKL1-209ENST00000477468 TEFQ10587 303 aa12.12□□□□□ -0.47
MKL1-209ENST00000477468 DDX54Q8TDD1 881 aaKnown RBP12.12□□□□□ -0.47
MKL1-209ENST00000477468 THUMPD2Q9BTF0 503 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms