RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 TATP17735 454 aaPredicted RBP22.39■■□□□ 1.18
EPHB4-204ENST00000477446 MYT1Q01538 1121 aa22.39■■□□□ 1.18
EPHB4-204ENST00000477446 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.18
EPHB4-204ENST00000477446 SEPT12Q8IYM1 358 aa22.39■■□□□ 1.18
EPHB4-204ENST00000477446 PNISRQ8TF01 805 aaKnown RBP22.38■■□□□ 1.17
EPHB4-204ENST00000477446 FCHSD2O94868 740 aa22.38■■□□□ 1.17
EPHB4-204ENST00000477446 RSPH6AQ9H0K4 717 aa22.38■■□□□ 1.17
EPHB4-204ENST00000477446 OVOS2A0A0G2JMS6 1433 aa22.37■■□□□ 1.17
EPHB4-204ENST00000477446 RGS12O14924 1447 aa22.37■■□□□ 1.17
EPHB4-204ENST00000477446 LRRC37A3O60309 1634 aa22.37■■□□□ 1.17
EPHB4-204ENST00000477446 ADAMTS8Q9UP79 889 aa22.37■■□□□ 1.17
EPHB4-204ENST00000477446 BRWD3Q6RI45 1802 aa22.36■■□□□ 1.17
EPHB4-204ENST00000477446 EXOC5O00471 708 aa22.35■■□□□ 1.17
EPHB4-204ENST00000477446 PRKAR2BP31323 418 aa22.35■■□□□ 1.17
EPHB4-204ENST00000477446 DDB1Q16531 1140 aa22.35■■□□□ 1.17
EPHB4-204ENST00000477446 PKD1L3Q7Z443 1732 aa22.34■■□□□ 1.17
EPHB4-204ENST00000477446 ZCRB1Q8TBF4 217 aaKnown RBP22.33■■□□□ 1.17
EPHB4-204ENST00000477446 TNS2Q63HR2 1409 aa22.33■■□□□ 1.17
EPHB4-204ENST00000477446 SHANK3Q9BYB0 1731 aa22.33■■□□□ 1.17
EPHB4-204ENST00000477446 HNRNPUQ00839 825 aaKnown RBP eCLIP22.33■■□□□ 1.16
EPHB4-204ENST00000477446 PLEKHG2Q9H7P9 1386 aa22.32■■□□□ 1.16
EPHB4-204ENST00000477446 PLEKHF1Q96S99 279 aa22.32■■□□□ 1.16
EPHB4-204ENST00000477446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.32■■□□□ 1.16
EPHB4-204ENST00000477446 PHACTR3Q96KR7 559 aa22.31■■□□□ 1.16
EPHB4-204ENST00000477446 SPG7Q9UQ90 795 aa22.31■■□□□ 1.16
EPHB4-204ENST00000477446 PDE3BQ13370 1112 aa22.3■■□□□ 1.16
EPHB4-204ENST00000477446 PLEKHO1Q53GL0 409 aaPredicted RBP22.3■■□□□ 1.16
EPHB4-204ENST00000477446 PNNQ9H307 717 aaKnown RBP22.3■■□□□ 1.16
EPHB4-204ENST00000477446 AMOTQ4VCS5 1084 aa22.29■■□□□ 1.16
EPHB4-204ENST00000477446 FAM9BQ8IZU0 186 aa22.29■■□□□ 1.16
EPHB4-204ENST00000477446 KRT27Q7Z3Y8 459 aa22.29■■□□□ 1.16
EPHB4-204ENST00000477446 DDX54Q8TDD1 881 aaKnown RBP22.29■■□□□ 1.16
EPHB4-204ENST00000477446 MTHFSDQ2M296 383 aaKnown RBP22.28■■□□□ 1.16
EPHB4-204ENST00000477446 CCDC146Q8IYE0 955 aa22.28■■□□□ 1.16
EPHB4-204ENST00000477446 PCDH11XQ9BZA7 1347 aa22.27■■□□□ 1.16
EPHB4-204ENST00000477446 PCDH11YQ9BZA8 1340 aa22.27■■□□□ 1.16
EPHB4-204ENST00000477446 MARCH10Q8NA82 808 aaPredicted RBP22.27■■□□□ 1.16
EPHB4-204ENST00000477446 CYP27B1O15528 508 aa22.26■■□□□ 1.15
EPHB4-204ENST00000477446 NEFMP07197 916 aa22.25■■□□□ 1.15
EPHB4-204ENST00000477446 FAM182BQ5T319 152 aa22.25■■□□□ 1.15
EPHB4-204ENST00000477446 ZNF530Q6P9A1 599 aaPredicted RBP22.25■■□□□ 1.15
EPHB4-204ENST00000477446 RUNDC1Q96C34 613 aa22.25■■□□□ 1.15
EPHB4-204ENST00000477446 MAPK8IP3Q9UPT6 1336 aa22.25■■□□□ 1.15
EPHB4-204ENST00000477446 IFNL2Q8IZJ0 200 aa22.24■■□□□ 1.15
EPHB4-204ENST00000477446 SUPT16HQ9Y5B9 1047 aaKnown RBP22.24■■□□□ 1.15
EPHB4-204ENST00000477446 PHKG2P15735 406 aa22.23■■□□□ 1.15
EPHB4-204ENST00000477446 GAS2L2Q8NHY3 880 aa22.23■■□□□ 1.15
EPHB4-204ENST00000477446 ZBED9Q6R2W3 1325 aa22.22■■□□□ 1.15
EPHB4-204ENST00000477446 C1orf141Q5JVX7 400 aa22.21■■□□□ 1.15
EPHB4-204ENST00000477446 NEFLP07196 543 aa22.21■■□□□ 1.15
EPHB4-204ENST00000477446 AKAP4Q5JQC9 854 aa22.21■■□□□ 1.15
EPHB4-204ENST00000477446 DLG5Q8TDM6 1919 aa22.2■■□□□ 1.14
EPHB4-204ENST00000477446 NKX1-1Q15270 411 aaPredicted RBP22.19■■□□□ 1.14
EPHB4-204ENST00000477446 NFE2L2Q16236 605 aa22.19■■□□□ 1.14
EPHB4-204ENST00000477446 MAP3K5Q99683 1374 aa22.17■■□□□ 1.14
EPHB4-204ENST00000477446 APAF1O14727 1248 aa22.17■■□□□ 1.14
EPHB4-204ENST00000477446 TMPOP42166 694 aaKnown RBP22.17■■□□□ 1.14
EPHB4-204ENST00000477446 VIRMAQ69YN4 1812 aaKnown RBP22.17■■□□□ 1.14
EPHB4-204ENST00000477446 GNAT3A8MTJ3 354 aa22.16■■□□□ 1.14
EPHB4-204ENST00000477446 HSP90AB1P08238 724 aaKnown RBP22.16■■□□□ 1.14
EPHB4-204ENST00000477446 MPRIPQ6WCQ1 1025 aa22.16■■□□□ 1.14
EPHB4-204ENST00000477446 FAM196AQ6ZSG2 479 aa22.16■■□□□ 1.14
EPHB4-204ENST00000477446 RRP7AQ9Y3A4 280 aaKnown RBP22.16■■□□□ 1.14
EPHB4-204ENST00000477446 BCL9O00512 1426 aa22.16■■□□□ 1.14
EPHB4-204ENST00000477446 SBF2Q86WG5 1849 aa22.16■■□□□ 1.14
EPHB4-204ENST00000477446 EP400Q96L91 3159 aa22.16■■□□□ 1.14
EPHB4-204ENST00000477446 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
EPHB4-204ENST00000477446 KAT6BQ8WYB5 2073 aa22.16■■□□□ 1.14
EPHB4-204ENST00000477446 KDM6AO15550 1401 aaPredicted RBP22.15■■□□□ 1.14
EPHB4-204ENST00000477446 SCN11AQ9UI33 1791 aa22.15■■□□□ 1.14
EPHB4-204ENST00000477446 NEUROD2Q15784 382 aa22.15■■□□□ 1.14
EPHB4-204ENST00000477446 DCAF5Q96JK2 942 aa22.15■■□□□ 1.14
EPHB4-204ENST00000477446 DOT1LQ8TEK3 1739 aa22.14■■□□□ 1.14
EPHB4-204ENST00000477446 TOGARAM1Q9Y4F4 1720 aa22.14■■□□□ 1.14
EPHB4-204ENST00000477446 SENP3-EIF4A1A0A087X0R7 540 aa22.14■■□□□ 1.13
EPHB4-204ENST00000477446 RIPK4P57078 832 aa22.14■■□□□ 1.13
EPHB4-204ENST00000477446 LGR6Q9HBX8 967 aa22.14■■□□□ 1.13
EPHB4-204ENST00000477446 ADAMTS7Q9UKP4 1686 aa22.13■■□□□ 1.13
EPHB4-204ENST00000477446 ACSBG1Q96GR2 724 aa22.12■■□□□ 1.13
EPHB4-204ENST00000477446 RNMTO43148 476 aaKnown RBP22.12■■□□□ 1.13
EPHB4-204ENST00000477446 HTATSF1O43719 755 aaKnown RBP22.12■■□□□ 1.13
EPHB4-204ENST00000477446 IL17REQ8NFR9 667 aa22.12■■□□□ 1.13
EPHB4-204ENST00000477446 RTF1Q92541 710 aaKnown RBP22.12■■□□□ 1.13
EPHB4-204ENST00000477446 ITGB4P16144 1822 aa22.11■■□□□ 1.13
EPHB4-204ENST00000477446 KCNQ2O43526 872 aa22.1■■□□□ 1.13
EPHB4-204ENST00000477446 PRIM1P49642 420 aaKnown RBP22.1■■□□□ 1.13
EPHB4-204ENST00000477446 DCTN1Q14203 1278 aa22.1■■□□□ 1.13
EPHB4-204ENST00000477446 MCM10Q7L590 875 aa22.1■■□□□ 1.13
EPHB4-204ENST00000477446 TRIM35Q9UPQ4 493 aa22.09■■□□□ 1.13
EPHB4-204ENST00000477446 NHSQ6T4R5 1651 aa22.09■■□□□ 1.13
EPHB4-204ENST00000477446 CEMIPQ8WUJ3 1361 aa22.08■■□□□ 1.13
EPHB4-204ENST00000477446 ERVV-2B6SEH9 535 aa22.08■■□□□ 1.13
EPHB4-204ENST00000477446 TRIM37O94972 964 aa22.08■■□□□ 1.13
EPHB4-204ENST00000477446 SYTL4Q96C24 671 aaPredicted RBP22.08■■□□□ 1.13
EPHB4-204ENST00000477446 FKBP8Q14318 412 aa22.08■■□□□ 1.12
EPHB4-204ENST00000477446 PTF1AQ7RTS3 328 aa22.08■■□□□ 1.12
EPHB4-204ENST00000477446 LMOD3Q0VAK6 560 aa22.07■■□□□ 1.12
EPHB4-204ENST00000477446 THUMPD2Q9BTF0 503 aaKnown RBP22.06■■□□□ 1.12
EPHB4-204ENST00000477446 SALL2Q9Y467 1007 aaPredicted RBP22.06■■□□□ 1.12
EPHB4-204ENST00000477446 CABP4P57796 275 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms